RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 RTEL1-TNFRSF6BF6WH68 1400 aa7.18□□□□□ -1.26
MTHFD1-216ENST00000557539 FHOD3Q2V2M9 1422 aa7.18□□□□□ -1.26
MTHFD1-216ENST00000557539 TOP2AP11388 1531 aaKnown RBP7.17□□□□□ -1.26
MTHFD1-216ENST00000557539 PCNTO95613 3336 aa7.17□□□□□ -1.26
MTHFD1-216ENST00000557539 ROBO1Q9Y6N7 1651 aa7.17□□□□□ -1.26
MTHFD1-216ENST00000557539 A6NHS1 94 aa7.17□□□□□ -1.26
MTHFD1-216ENST00000557539 EIF4BP23588 611 aaKnown RBP7.17□□□□□ -1.26
MTHFD1-216ENST00000557539 DBN1Q16643 649 aa7.17□□□□□ -1.26
MTHFD1-216ENST00000557539 ZNF394Q53GI3 561 aa7.17□□□□□ -1.26
MTHFD1-216ENST00000557539 TREML1Q86YW5 311 aa7.17□□□□□ -1.26
MTHFD1-216ENST00000557539 ZNF837Q96EG3 531 aaPredicted RBP7.17□□□□□ -1.26
MTHFD1-216ENST00000557539 FRMD6Q96NE9 622 aa7.17□□□□□ -1.26
MTHFD1-216ENST00000557539 ADAMTS8Q9UP79 889 aa7.17□□□□□ -1.26
MTHFD1-216ENST00000557539 SPG7Q9UQ90 795 aa7.17□□□□□ -1.26
MTHFD1-216ENST00000557539 INPP5FQ9Y2H2 1132 aa7.17□□□□□ -1.26
MTHFD1-216ENST00000557539 PCDHGB7Q9Y5F8 929 aa7.17□□□□□ -1.26
MTHFD1-216ENST00000557539 NINLQ9Y2I6 1382 aa7.17□□□□□ -1.26
MTHFD1-216ENST00000557539 CCDC88BA6NC98 1476 aa7.17□□□□□ -1.26
MTHFD1-216ENST00000557539 OPLAHO14841 1288 aa7.16□□□□□ -1.26
MTHFD1-216ENST00000557539 ARHGEF15O94989 841 aa7.16□□□□□ -1.26
MTHFD1-216ENST00000557539 NEFLP07196 543 aa7.16□□□□□ -1.26
MTHFD1-216ENST00000557539 CENPCQ03188 943 aa7.16□□□□□ -1.26
MTHFD1-216ENST00000557539 ZNF654Q8IZM8 581 aa7.16□□□□□ -1.26
MTHFD1-216ENST00000557539 DNAJC5GQ8N7S2 189 aa7.16□□□□□ -1.26
MTHFD1-216ENST00000557539 NLRP3Q96P20 1036 aa7.16□□□□□ -1.26
MTHFD1-216ENST00000557539 FHDC1Q9C0D6 1143 aaPredicted RBP7.16□□□□□ -1.26
MTHFD1-216ENST00000557539 GGNBP2Q9H3C7 697 aa7.16□□□□□ -1.26
MTHFD1-216ENST00000557539 ARID5AQ03989 594 aa7.15□□□□□ -1.26
MTHFD1-216ENST00000557539 KCNMA1Q12791 1236 aa7.15□□□□□ -1.26
MTHFD1-216ENST00000557539 SLC27A3Q5K4L6 730 aa7.15□□□□□ -1.26
MTHFD1-216ENST00000557539 NBPF10Q6P3W6 841 aaKnown RBP7.15□□□□□ -1.26
MTHFD1-216ENST00000557539 USP48Q86UV5 1035 aa7.15□□□□□ -1.26
MTHFD1-216ENST00000557539 TRIM22Q8IYM9 498 aa7.15□□□□□ -1.26
MTHFD1-216ENST00000557539 PMFBP1Q8TBY8 1022 aa7.15□□□□□ -1.26
MTHFD1-216ENST00000557539 DDX41Q9UJV9 622 aaKnown RBP7.15□□□□□ -1.26
MTHFD1-216ENST00000557539 AATKQ6ZMQ8 1374 aa7.15□□□□□ -1.26
MTHFD1-216ENST00000557539 PHLPP1O60346 1717 aa7.15□□□□□ -1.27
MTHFD1-216ENST00000557539 RICTORQ6R327 1708 aa7.15□□□□□ -1.27
MTHFD1-216ENST00000557539 SPATA31C2B4DYI2 1134 aa7.14□□□□□ -1.27
MTHFD1-216ENST00000557539 GPR25O00155 361 aa7.14□□□□□ -1.27
MTHFD1-216ENST00000557539 ATP10AO60312 1499 aa7.14□□□□□ -1.27
MTHFD1-216ENST00000557539 CPNE3O75131 537 aaKnown RBP7.14□□□□□ -1.27
MTHFD1-216ENST00000557539 ADAMTS2O95450 1211 aa7.14□□□□□ -1.27
MTHFD1-216ENST00000557539 NCLP19338 710 aaKnown RBP7.14□□□□□ -1.27
MTHFD1-216ENST00000557539 RACK1P63244 317 aaKnown RBP7.14□□□□□ -1.27
MTHFD1-216ENST00000557539 MLLT1Q03111 559 aaPredicted RBP7.14□□□□□ -1.27
MTHFD1-216ENST00000557539 CCDC144BQ3MJ40 725 aa7.14□□□□□ -1.27
MTHFD1-216ENST00000557539 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.14□□□□□ -1.27
MTHFD1-216ENST00000557539 NOP9Q86U38 636 aaKnown RBP7.14□□□□□ -1.27
MTHFD1-216ENST00000557539 MAGI2Q86UL8 1455 aa7.14□□□□□ -1.27
MTHFD1-216ENST00000557539 ZNF295-AS1Q8N0V1 137 aa7.14□□□□□ -1.27
MTHFD1-216ENST00000557539 SVOPQ8N4V2 548 aa7.14□□□□□ -1.27
MTHFD1-216ENST00000557539 GMLQ99445 158 aa7.14□□□□□ -1.27
MTHFD1-216ENST00000557539 NIFKQ9BYG3 293 aaKnown RBP7.14□□□□□ -1.27
MTHFD1-216ENST00000557539 DNAJC25Q9H1X3 360 aa7.14□□□□□ -1.27
MTHFD1-216ENST00000557539 DYRK1BQ9Y463 629 aa7.14□□□□□ -1.27
MTHFD1-216ENST00000557539 SCAF11Q99590 1463 aaKnown RBP7.13□□□□□ -1.27
MTHFD1-216ENST00000557539 NPATQ14207 1427 aa7.13□□□□□ -1.27
MTHFD1-216ENST00000557539 C9orf84Q5VXU9 1444 aa7.13□□□□□ -1.27
MTHFD1-216ENST00000557539 ANKRD62A6NC57 917 aa7.13□□□□□ -1.27
MTHFD1-216ENST00000557539 THBS1P07996 1170 aa7.13□□□□□ -1.27
MTHFD1-216ENST00000557539 TMEM214Q6NUQ4 689 aaKnown RBP7.13□□□□□ -1.27
MTHFD1-216ENST00000557539 LYPD4Q6UWN0 246 aa7.13□□□□□ -1.27
MTHFD1-216ENST00000557539 HS2ST1Q7LGA3 356 aa7.13□□□□□ -1.27
MTHFD1-216ENST00000557539 PPARGC1BQ86YN6 1023 aaKnown RBP7.13□□□□□ -1.27
MTHFD1-216ENST00000557539 ARMC5Q96C12 935 aa7.13□□□□□ -1.27
MTHFD1-216ENST00000557539 ZSCAN10Q96SZ4 725 aaPredicted RBP7.13□□□□□ -1.27
MTHFD1-216ENST00000557539 FAM13BQ9NYF5 915 aa7.13□□□□□ -1.27
MTHFD1-216ENST00000557539 GGT7Q9UJ14 662 aa7.13□□□□□ -1.27
MTHFD1-216ENST00000557539 CHD4Q14839 1912 aa7.13□□□□□ -1.27
MTHFD1-216ENST00000557539 SYNMO15061 1565 aa7.12□□□□□ -1.27
MTHFD1-216ENST00000557539 ABCA8O94911 1581 aa7.12□□□□□ -1.27
MTHFD1-216ENST00000557539 ZMYM4Q5VZL5 1548 aa7.12□□□□□ -1.27
MTHFD1-216ENST00000557539 MICAL2O94851 1124 aa7.12□□□□□ -1.27
MTHFD1-216ENST00000557539 RPLP1P05386 114 aaKnown RBP7.12□□□□□ -1.27
MTHFD1-216ENST00000557539 GTF2E1P29083 439 aaPredicted RBP7.12□□□□□ -1.27
MTHFD1-216ENST00000557539 TXLNAP40222 546 aa7.12□□□□□ -1.27
MTHFD1-216ENST00000557539 C1orf53Q5VUE5 145 aa7.12□□□□□ -1.27
MTHFD1-216ENST00000557539 PI16Q6UXB8 463 aa7.12□□□□□ -1.27
MTHFD1-216ENST00000557539 RIPOR1Q6ZS17 1223 aa7.12□□□□□ -1.27
MTHFD1-216ENST00000557539 GMCL1Q96IK5 515 aa7.12□□□□□ -1.27
MTHFD1-216ENST00000557539 GAS2L1Q99501 681 aaPredicted RBP7.12□□□□□ -1.27
MTHFD1-216ENST00000557539 BCS1LQ9Y276 419 aa7.12□□□□□ -1.27
MTHFD1-216ENST00000557539 TMA7Q9Y2S6 64 aaKnown RBP7.12□□□□□ -1.27
MTHFD1-216ENST00000557539 NEURL4Q96JN8 1562 aa7.12□□□□□ -1.27
MTHFD1-216ENST00000557539 ERICH3Q5RHP9 1530 aa7.11□□□□□ -1.27
MTHFD1-216ENST00000557539 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.11□□□□□ -1.27
MTHFD1-216ENST00000557539 DLL1O00548 723 aa7.11□□□□□ -1.27
MTHFD1-216ENST00000557539 SRSF11Q05519 484 aaKnown RBP7.11□□□□□ -1.27
MTHFD1-216ENST00000557539 WDR44Q5JSH3 913 aa7.11□□□□□ -1.27
MTHFD1-216ENST00000557539 USPL1Q5W0Q7 1092 aa7.11□□□□□ -1.27
MTHFD1-216ENST00000557539 VPS37DQ86XT2 251 aa7.11□□□□□ -1.27
MTHFD1-216ENST00000557539 GTPBP3Q969Y2 492 aaKnown RBP7.11□□□□□ -1.27
MTHFD1-216ENST00000557539 C12orf49Q9H741 205 aa7.11□□□□□ -1.27
MTHFD1-216ENST00000557539 SRA1Q9HD15 236 aaKnown RBP7.11□□□□□ -1.27
MTHFD1-216ENST00000557539 CEP170BQ9Y4F5 1589 aaPredicted RBP7.11□□□□□ -1.27
MTHFD1-216ENST00000557539 FGD6Q6ZV73 1430 aa7.1□□□□□ -1.27
MTHFD1-216ENST00000557539 STRCP1A6NGW2 1772 aa7.1□□□□□ -1.27
MTHFD1-216ENST00000557539 CELA2BP08218 269 aaPredicted RBP7.1□□□□□ -1.27
MTHFD1-216ENST00000557539 IRS1P35568 1242 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms