RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 CFAP45Q9UL16 551 aa12.51□□□□□ -0.41
MTHFD1-210ENST00000555252 U3KPZ7 1027 aaPredicted RBP12.51□□□□□ -0.41
MTHFD1-210ENST00000555252 WDR17Q8IZU2 1322 aa12.51□□□□□ -0.41
MTHFD1-210ENST00000555252 GLI3P10071 1580 aa12.51□□□□□ -0.41
MTHFD1-210ENST00000555252 CAMK4Q16566 473 aa12.5□□□□□ -0.41
MTHFD1-210ENST00000555252 ATL3Q6DD88 541 aa12.5□□□□□ -0.41
MTHFD1-210ENST00000555252 CKAP2LQ8IYA6 745 aa12.5□□□□□ -0.41
MTHFD1-210ENST00000555252 ZCRB1Q8TBF4 217 aaKnown RBP12.5□□□□□ -0.41
MTHFD1-210ENST00000555252 BBXQ8WY36 941 aaPredicted RBP12.5□□□□□ -0.41
MTHFD1-210ENST00000555252 TMEM51Q9NW97 253 aa12.5□□□□□ -0.41
MTHFD1-210ENST00000555252 TPCN1Q9ULQ1 816 aa12.5□□□□□ -0.41
MTHFD1-210ENST00000555252 GTF2E1P29083 439 aaPredicted RBP12.5□□□□□ -0.41
MTHFD1-210ENST00000555252 NKX1-1Q15270 411 aaPredicted RBP12.5□□□□□ -0.41
MTHFD1-210ENST00000555252 L2HGDHQ9H9P8 463 aa12.5□□□□□ -0.41
MTHFD1-210ENST00000555252 CWC25Q9NXE8 425 aaPredicted RBP12.5□□□□□ -0.41
MTHFD1-210ENST00000555252 CCDC144BQ3MJ40 725 aa12.49□□□□□ -0.41
MTHFD1-210ENST00000555252 CCDC144CPQ8IYA2 1237 aa12.49□□□□□ -0.41
MTHFD1-210ENST00000555252 CCAR2Q8N163 923 aaKnown RBP12.49□□□□□ -0.41
MTHFD1-210ENST00000555252 LARP6Q9BRS8 491 aaKnown RBP12.49□□□□□ -0.41
MTHFD1-210ENST00000555252 DNAJC25Q9H1X3 360 aa12.49□□□□□ -0.41
MTHFD1-210ENST00000555252 ATG3Q9NT62 314 aa12.49□□□□□ -0.41
MTHFD1-210ENST00000555252 ZNF215Q9UL58 517 aaPredicted RBP12.49□□□□□ -0.41
MTHFD1-210ENST00000555252 ATP5J2-PTCD1G3V325 749 aa12.49□□□□□ -0.41
MTHFD1-210ENST00000555252 PTCD1O75127 700 aaKnown RBP12.49□□□□□ -0.41
MTHFD1-210ENST00000555252 SKILP12757 684 aa12.49□□□□□ -0.41
MTHFD1-210ENST00000555252 FOXO4P98177 505 aa12.49□□□□□ -0.41
MTHFD1-210ENST00000555252 MCMDC2Q4G0Z9 681 aa12.49□□□□□ -0.41
MTHFD1-210ENST00000555252 TPRNQ4KMQ1 711 aa12.49□□□□□ -0.41
MTHFD1-210ENST00000555252 BICD2Q8TD16 824 aa12.49□□□□□ -0.41
MTHFD1-210ENST00000555252 OSBPL5Q9H0X9 879 aaPredicted RBP12.49□□□□□ -0.41
MTHFD1-210ENST00000555252 LAMA4Q16363 1823 aa12.48□□□□□ -0.41
MTHFD1-210ENST00000555252 SH3TC1Q8TE82 1336 aa12.48□□□□□ -0.41
MTHFD1-210ENST00000555252 PSDA5PKW4 1024 aaPredicted RBP12.48□□□□□ -0.41
MTHFD1-210ENST00000555252 NR1I2O75469 434 aa12.48□□□□□ -0.41
MTHFD1-210ENST00000555252 H2AFXP16104 143 aaPredicted RBP12.48□□□□□ -0.41
MTHFD1-210ENST00000555252 IL15P40933 162 aaPredicted RBP12.48□□□□□ -0.41
MTHFD1-210ENST00000555252 CCZ1BP86790 482 aa12.48□□□□□ -0.41
MTHFD1-210ENST00000555252 CCZ1P86791 482 aaPredicted RBP12.48□□□□□ -0.41
MTHFD1-210ENST00000555252 FBXO38Q6PIJ6 1188 aa12.48□□□□□ -0.41
MTHFD1-210ENST00000555252 LMBR1LQ6UX01 489 aa12.48□□□□□ -0.41
MTHFD1-210ENST00000555252 CCDC191Q8NCU4 936 aa12.48□□□□□ -0.41
MTHFD1-210ENST00000555252 DNAJC2Q99543 621 aaKnown RBP12.48□□□□□ -0.41
MTHFD1-210ENST00000555252 ANO10Q9NW15 660 aa12.48□□□□□ -0.41
MTHFD1-210ENST00000555252 PALLDQ8WX93 1383 aa12.48□□□□□ -0.41
MTHFD1-210ENST00000555252 UBR2Q8IWV8 1755 aa12.48□□□□□ -0.41
MTHFD1-210ENST00000555252 CCP110O43303 1012 aa12.47□□□□□ -0.41
MTHFD1-210ENST00000555252 ATP8B1O43520 1251 aa12.47□□□□□ -0.41
MTHFD1-210ENST00000555252 NRDCO43847 1150 aa12.47□□□□□ -0.41
MTHFD1-210ENST00000555252 HMGB1P09429 215 aaKnown RBP12.47□□□□□ -0.41
MTHFD1-210ENST00000555252 CDK11BP21127 795 aaKnown RBP12.47□□□□□ -0.41
MTHFD1-210ENST00000555252 ZNF589Q86UQ0 364 aaPredicted RBP12.47□□□□□ -0.41
MTHFD1-210ENST00000555252 NECAB1Q8N987 351 aa12.47□□□□□ -0.41
MTHFD1-210ENST00000555252 KBTBD3Q8NAB2 608 aa12.47□□□□□ -0.41
MTHFD1-210ENST00000555252 PGBD1Q96JS3 809 aa12.47□□□□□ -0.41
MTHFD1-210ENST00000555252 DBNDD2Q9BQY9 259 aa12.47□□□□□ -0.41
MTHFD1-210ENST00000555252 HELLSQ9NRZ9 838 aa12.47□□□□□ -0.41
MTHFD1-210ENST00000555252 PAPPAQ13219 1627 aa12.47□□□□□ -0.41
MTHFD1-210ENST00000555252 CCDC69A6NI79 296 aa12.47□□□□□ -0.41
MTHFD1-210ENST00000555252 NBPF26B4DH59 902 aa12.47□□□□□ -0.41
MTHFD1-210ENST00000555252 TULP2O00295 520 aa12.47□□□□□ -0.41
MTHFD1-210ENST00000555252 IGSF3O75054 1194 aa12.47□□□□□ -0.41
MTHFD1-210ENST00000555252 CIAO1O76071 339 aa12.47□□□□□ -0.41
MTHFD1-210ENST00000555252 RESTQ13127 1097 aa12.47□□□□□ -0.41
MTHFD1-210ENST00000555252 TOB2Q14106 344 aaPredicted RBP12.47□□□□□ -0.41
MTHFD1-210ENST00000555252 NBPF14Q5TI25 921 aa12.47□□□□□ -0.41
MTHFD1-210ENST00000555252 NBPF10Q6P3W6 841 aaKnown RBP12.47□□□□□ -0.41
MTHFD1-210ENST00000555252 TOM1L2Q6ZVM7 507 aa12.47□□□□□ -0.41
MTHFD1-210ENST00000555252 NBPF15Q8N660 670 aa12.47□□□□□ -0.41
MTHFD1-210ENST00000555252 CCDC150Q8NCX0 1101 aa12.47□□□□□ -0.41
MTHFD1-210ENST00000555252 NEK1Q96PY6 1258 aa12.47□□□□□ -0.41
MTHFD1-210ENST00000555252 NAT10Q9H0A0 1025 aaKnown RBP12.47□□□□□ -0.41
MTHFD1-210ENST00000555252 PRDM11Q9NQV5 511 aa12.47□□□□□ -0.41
MTHFD1-210ENST00000555252 PIP4K2AP48426 406 aaPredicted RBP12.46□□□□□ -0.41
MTHFD1-210ENST00000555252 FERMT3Q86UX7 667 aa12.46□□□□□ -0.41
MTHFD1-210ENST00000555252 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.46□□□□□ -0.41
MTHFD1-210ENST00000555252 ZNF592Q92610 1267 aa12.46□□□□□ -0.41
MTHFD1-210ENST00000555252 CHMP4CQ96CF2 233 aa12.46□□□□□ -0.41
MTHFD1-210ENST00000555252 LLPHQ9BRT6 129 aaKnown RBP12.46□□□□□ -0.41
MTHFD1-210ENST00000555252 CARD10Q9BWT7 1032 aa12.46□□□□□ -0.41
MTHFD1-210ENST00000555252 FBXO3Q9UK99 471 aa12.46□□□□□ -0.41
MTHFD1-210ENST00000555252 KCPQ6ZWJ8 1503 aa12.46□□□□□ -0.42
MTHFD1-210ENST00000555252 NUP188Q5SRE5 1749 aa12.46□□□□□ -0.42
MTHFD1-210ENST00000555252 BECN2A8MW95 431 aa12.46□□□□□ -0.42
MTHFD1-210ENST00000555252 IL2RBP14784 551 aa12.46□□□□□ -0.42
MTHFD1-210ENST00000555252 CYP2C19P33261 490 aa12.46□□□□□ -0.42
MTHFD1-210ENST00000555252 NAA30Q147X3 362 aaPredicted RBP12.46□□□□□ -0.42
MTHFD1-210ENST00000555252 BRINP3Q76B58 766 aa12.46□□□□□ -0.42
MTHFD1-210ENST00000555252 SRRTQ9BXP5 876 aaKnown RBP12.46□□□□□ -0.42
MTHFD1-210ENST00000555252 ARGLU1Q9NWB6 273 aaPredicted RBP12.46□□□□□ -0.42
MTHFD1-210ENST00000555252 ZNF609O15014 1411 aa12.45□□□□□ -0.42
MTHFD1-210ENST00000555252 TNS2Q63HR2 1409 aa12.45□□□□□ -0.42
MTHFD1-210ENST00000555252 COL5A2P05997 1499 aaPredicted RBP12.45□□□□□ -0.42
MTHFD1-210ENST00000555252 TPM1P09493 284 aa12.45□□□□□ -0.42
MTHFD1-210ENST00000555252 ELF2Q15723 593 aa12.45□□□□□ -0.42
MTHFD1-210ENST00000555252 LRRFIP1Q32MZ4 808 aaKnown RBP12.45□□□□□ -0.42
MTHFD1-210ENST00000555252 ATG9AQ7Z3C6 839 aa12.45□□□□□ -0.42
MTHFD1-210ENST00000555252 FILIP1Q7Z7B0 1213 aa12.45□□□□□ -0.42
MTHFD1-210ENST00000555252 CEP57L1Q8IYX8 460 aa12.45□□□□□ -0.42
MTHFD1-210ENST00000555252 GTF3C6Q969F1 213 aa12.45□□□□□ -0.42
MTHFD1-210ENST00000555252 BPIFA3Q9BQP9 254 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms