RNA–Protein interactions for RNA: ENST00000548092.5

TRAFD1-204, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-204ENST00000548092 FAM26DQ5JW98 314 aa6.89□□□□□ -1.31
TRAFD1-204ENST00000548092 VTI1AQ96AJ9 217 aa6.89□□□□□ -1.31
TRAFD1-204ENST00000548092 SLAIN2Q9P270 581 aa6.89□□□□□ -1.31
TRAFD1-204ENST00000548092 NAGPAQ9UK23 515 aa6.89□□□□□ -1.31
TRAFD1-204ENST00000548092 SCAPERQ9BY12 1400 aa6.89□□□□□ -1.31
TRAFD1-204ENST00000548092 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.89□□□□□ -1.31
TRAFD1-204ENST00000548092 GOLGA3Q08378 1498 aa6.88□□□□□ -1.31
TRAFD1-204ENST00000548092 ARSDP51689 593 aa6.88□□□□□ -1.31
TRAFD1-204ENST00000548092 GRIK4Q16099 956 aa6.88□□□□□ -1.31
TRAFD1-204ENST00000548092 SWI5Q1ZZU3 235 aa6.88□□□□□ -1.31
TRAFD1-204ENST00000548092 PNMA5Q96PV4 448 aa6.88□□□□□ -1.31
TRAFD1-204ENST00000548092 EFCC1Q9HA90 598 aa6.88□□□□□ -1.31
TRAFD1-204ENST00000548092 FAM135BQ49AJ0 1406 aa6.87□□□□□ -1.31
TRAFD1-204ENST00000548092 ATG7O95352 703 aa6.87□□□□□ -1.31
TRAFD1-204ENST00000548092 PLAURQ03405 335 aa6.87□□□□□ -1.31
TRAFD1-204ENST00000548092 DOC2BQ14184 412 aa6.87□□□□□ -1.31
TRAFD1-204ENST00000548092 TMEM164Q5U3C3 297 aa6.87□□□□□ -1.31
TRAFD1-204ENST00000548092 PSAPL1Q6NUJ1 521 aa6.87□□□□□ -1.31
TRAFD1-204ENST00000548092 TREML1Q86YW5 311 aa6.87□□□□□ -1.31
TRAFD1-204ENST00000548092 JPH1Q9HDC5 661 aaPredicted RBP6.87□□□□□ -1.31
TRAFD1-204ENST00000548092 RTCBQ9Y3I0 505 aaKnown RBP6.87□□□□□ -1.31
TRAFD1-204ENST00000548092 STRCP1A6NGW2 1772 aa6.87□□□□□ -1.31
TRAFD1-204ENST00000548092 RAPGEF6Q8TEU7 1601 aa6.87□□□□□ -1.31
TRAFD1-204ENST00000548092 KDM5CP41229 1560 aa6.86□□□□□ -1.31
TRAFD1-204ENST00000548092 UTRNP46939 3433 aa6.86□□□□□ -1.31
TRAFD1-204ENST00000548092 CDK13Q14004 1512 aaKnown RBP6.86□□□□□ -1.31
TRAFD1-204ENST00000548092 K7ELQ4 463 aaPredicted RBP6.86□□□□□ -1.31
TRAFD1-204ENST00000548092 LILRB5O75023 590 aa6.86□□□□□ -1.31
TRAFD1-204ENST00000548092 AFF1P51825 1210 aaKnown RBP6.86□□□□□ -1.31
TRAFD1-204ENST00000548092 TRIM28Q13263 835 aaKnown RBP6.86□□□□□ -1.31
TRAFD1-204ENST00000548092 TRAPPC3LQ5T215 181 aa6.86□□□□□ -1.31
TRAFD1-204ENST00000548092 ZNF772Q68DY9 489 aaPredicted RBP6.86□□□□□ -1.31
TRAFD1-204ENST00000548092 ETFBKMTQ8IXQ9 262 aa6.86□□□□□ -1.31
TRAFD1-204ENST00000548092 GTF3C3Q9Y5Q9 886 aa6.86□□□□□ -1.31
TRAFD1-204ENST00000548092 LRP6O75581 1613 aa6.86□□□□□ -1.31
TRAFD1-204ENST00000548092 MAP3K6O95382 1288 aa6.85□□□□□ -1.31
TRAFD1-204ENST00000548092 EPB42P16452 691 aa6.85□□□□□ -1.31
TRAFD1-204ENST00000548092 ITGB7P26010 798 aa6.85□□□□□ -1.31
TRAFD1-204ENST00000548092 MLLT1Q03111 559 aaPredicted RBP6.85□□□□□ -1.31
TRAFD1-204ENST00000548092 NAA30Q147X3 362 aaPredicted RBP6.85□□□□□ -1.31
TRAFD1-204ENST00000548092 GRIK5Q16478 980 aa6.85□□□□□ -1.31
TRAFD1-204ENST00000548092 PRRT3Q5FWE3 981 aa6.85□□□□□ -1.31
TRAFD1-204ENST00000548092 DHX32Q7L7V1 743 aaKnown RBP6.85□□□□□ -1.31
TRAFD1-204ENST00000548092 RGL4Q8IZJ4 473 aa6.85□□□□□ -1.31
TRAFD1-204ENST00000548092 CMTR1Q8N1G2 835 aaKnown RBP6.85□□□□□ -1.31
TRAFD1-204ENST00000548092 MKNK1Q9BUB5 465 aa6.85□□□□□ -1.31
TRAFD1-204ENST00000548092 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.85□□□□□ -1.312e-6■■■■■ 41.9
TRAFD1-204ENST00000548092 CXXC1Q9P0U4 656 aaPredicted RBP6.85□□□□□ -1.31
TRAFD1-204ENST00000548092 KCNMB2Q9Y691 235 aa6.85□□□□□ -1.31
TRAFD1-204ENST00000548092 DNMT1P26358 1616 aaKnown RBP6.85□□□□□ -1.31
TRAFD1-204ENST00000548092 ABCA6Q8N139 1617 aa6.85□□□□□ -1.31
TRAFD1-204ENST00000548092 A2ML1A8K2U0 1454 aa6.85□□□□□ -1.31
TRAFD1-204ENST00000548092 RGS12O14924 1447 aa6.84□□□□□ -1.31
TRAFD1-204ENST00000548092 A0A0A0MRY4 1105 aa6.84□□□□□ -1.31
TRAFD1-204ENST00000548092 SPDYE3A6NKU9 549 aa6.84□□□□□ -1.31
TRAFD1-204ENST00000548092 RARAP10276 462 aa6.84□□□□□ -1.31
TRAFD1-204ENST00000548092 CPB1P15086 417 aa6.84□□□□□ -1.31
TRAFD1-204ENST00000548092 GATA4P43694 442 aa6.84□□□□□ -1.31
TRAFD1-204ENST00000548092 PERM1Q5SV97 790 aa6.84□□□□□ -1.31
TRAFD1-204ENST00000548092 HFE2Q6ZVN8 426 aa6.84□□□□□ -1.31
TRAFD1-204ENST00000548092 FAM35AQ86V20 835 aa6.84□□□□□ -1.31
TRAFD1-204ENST00000548092 LPIN3Q9BQK8 851 aa6.84□□□□□ -1.31
TRAFD1-204ENST00000548092 ZNF518AQ6AHZ1 1483 aa6.84□□□□□ -1.31
TRAFD1-204ENST00000548092 ZMYM3Q14202 1370 aa6.83□□□□□ -1.32
TRAFD1-204ENST00000548092 TNFRSF10BO14763 440 aa6.83□□□□□ -1.32
TRAFD1-204ENST00000548092 EGFRP00533 1210 aa6.83□□□□□ -1.32
TRAFD1-204ENST00000548092 YY1P25490 414 aa6.83□□□□□ -1.32
TRAFD1-204ENST00000548092 RXRBP28702 533 aa6.83□□□□□ -1.32
TRAFD1-204ENST00000548092 DMRTC2Q8IXT2 367 aaPredicted RBP6.83□□□□□ -1.32
TRAFD1-204ENST00000548092 TRPM4Q8TD43 1214 aa6.83□□□□□ -1.32
TRAFD1-204ENST00000548092 C11orf16Q9NQ32 467 aa6.83□□□□□ -1.32
TRAFD1-204ENST00000548092 JCADQ9P266 1359 aa6.82□□□□□ -1.32
TRAFD1-204ENST00000548092 ROBO1Q9Y6N7 1651 aa6.82□□□□□ -1.32
TRAFD1-204ENST00000548092 MED14O60244 1454 aa6.82□□□□□ -1.32
TRAFD1-204ENST00000548092 XYLBO75191 536 aa6.82□□□□□ -1.32
TRAFD1-204ENST00000548092 RGS9O75916 674 aaPredicted RBP6.82□□□□□ -1.32
TRAFD1-204ENST00000548092 SELPP16109 830 aa6.82□□□□□ -1.32
TRAFD1-204ENST00000548092 C16orf46Q6P387 395 aa6.82□□□□□ -1.32
TRAFD1-204ENST00000548092 SHISA2Q6UWI4 295 aa6.82□□□□□ -1.32
TRAFD1-204ENST00000548092 PBXIP1Q96AQ6 731 aa6.82□□□□□ -1.32
TRAFD1-204ENST00000548092 J3QW42 95 aa6.81□□□□□ -1.32
TRAFD1-204ENST00000548092 MMP20O60882 483 aa6.81□□□□□ -1.32
TRAFD1-204ENST00000548092 APBA3O96018 575 aa6.81□□□□□ -1.32
TRAFD1-204ENST00000548092 BRD2P25440 801 aaKnown RBP6.81□□□□□ -1.32
TRAFD1-204ENST00000548092 TRIP4Q15650 581 aaPredicted RBP6.81□□□□□ -1.32
TRAFD1-204ENST00000548092 CLP1Q92989 425 aaKnown RBP6.81□□□□□ -1.32
TRAFD1-204ENST00000548092 COL26A1Q96A83 441 aa6.81□□□□□ -1.32
TRAFD1-204ENST00000548092 TPSG1Q9NRR2 321 aa6.81□□□□□ -1.32
TRAFD1-204ENST00000548092 TLR7Q9NYK1 1049 aaKnown RBP6.81□□□□□ -1.32
TRAFD1-204ENST00000548092 NPHP4O75161 1426 aaPredicted RBP6.81□□□□□ -1.32
TRAFD1-204ENST00000548092 NHSL1Q5SYE7 1610 aa6.8□□□□□ -1.32
TRAFD1-204ENST00000548092 ZBTB39O15060 712 aa6.8□□□□□ -1.32
TRAFD1-204ENST00000548092 SCNN1AP37088 669 aa6.8□□□□□ -1.32
TRAFD1-204ENST00000548092 GPLD1P80108 840 aa6.8□□□□□ -1.32
TRAFD1-204ENST00000548092 RSPO4Q2I0M5 234 aaPredicted RBP6.8□□□□□ -1.32
TRAFD1-204ENST00000548092 MSL1Q68DK7 614 aa6.8□□□□□ -1.32
TRAFD1-204ENST00000548092 CCDC97Q96F63 343 aaPredicted RBP6.8□□□□□ -1.32
TRAFD1-204ENST00000548092 SEMA6BQ9H3T3 888 aa6.8□□□□□ -1.32
TRAFD1-204ENST00000548092 SERPINA10Q9UK55 444 aa6.8□□□□□ -1.32
TRAFD1-204ENST00000548092 XIRP1Q702N8 1843 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms