RNA–Protein interactions for RNA: ENST00000543153.1

RFC5-209, Transcript of replication factor C subunit 5, humanhuman

TSL 5

Gene RFC5, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-209ENST00000543153 MYCP01106 439 aaPredicted RBP13.87□□□□□ -0.19
RFC5-209ENST00000543153 NLGN2Q8NFZ4 835 aa13.87□□□□□ -0.19
RFC5-209ENST00000543153 LY75O60449 1722 aa13.87□□□□□ -0.19
RFC5-209ENST00000543153 QSER1Q2KHR3 1735 aa13.87□□□□□ -0.19
RFC5-209ENST00000543153 TNFRSF10AO00220 468 aa13.86□□□□□ -0.19
RFC5-209ENST00000543153 COL23A1Q86Y22 540 aaPredicted RBP13.86□□□□□ -0.19
RFC5-209ENST00000543153 PCGF6Q9BYE7 350 aa13.86□□□□□ -0.19
RFC5-209ENST00000543153 SPG7Q9UQ90 795 aa13.86□□□□□ -0.19
RFC5-209ENST00000543153 CYP27B1O15528 508 aa13.85□□□□□ -0.19
RFC5-209ENST00000543153 TNNT2P45379 298 aaPredicted RBP13.85□□□□□ -0.19
RFC5-209ENST00000543153 FLAD1Q8NFF5 587 aa13.85□□□□□ -0.19
RFC5-209ENST00000543153 SMARCC1Q92922 1105 aaPredicted RBP13.85□□□□□ -0.19
RFC5-209ENST00000543153 PGPEP1Q9NXJ5 209 aa13.85□□□□□ -0.19
RFC5-209ENST00000543153 TUBGCP6Q96RT7 1819 aa13.85□□□□□ -0.19
RFC5-209ENST00000543153 UTRNP46939 3433 aa13.84□□□□□ -0.19
RFC5-209ENST00000543153 ATP1A2P50993 1020 aa13.84□□□□□ -0.19
RFC5-209ENST00000543153 PRR20EP86478 221 aa13.84□□□□□ -0.19
RFC5-209ENST00000543153 PRR20CP86479 221 aa13.84□□□□□ -0.19
RFC5-209ENST00000543153 PRR20DP86480 221 aa13.84□□□□□ -0.19
RFC5-209ENST00000543153 PRR20BP86481 221 aa13.84□□□□□ -0.19
RFC5-209ENST00000543153 PRR20AP86496 221 aa13.84□□□□□ -0.19
RFC5-209ENST00000543153 C5P01031 1676 aa13.84□□□□□ -0.19
RFC5-209ENST00000543153 SENP3-EIF4A1A0A087X0R7 540 aa13.83□□□□□ -0.2
RFC5-209ENST00000543153 RASA1P20936 1047 aa13.83□□□□□ -0.2
RFC5-209ENST00000543153 PDE4CQ08493 712 aa13.83□□□□□ -0.2
RFC5-209ENST00000543153 PPP1R26Q5T8A7 1209 aaPredicted RBP13.83□□□□□ -0.2
RFC5-209ENST00000543153 TMOD3Q9NYL9 352 aa13.83□□□□□ -0.2
RFC5-209ENST00000543153 GRIN3BO60391 1043 aa13.82□□□□□ -0.2
RFC5-209ENST00000543153 ATG7O95352 703 aa13.82□□□□□ -0.2
RFC5-209ENST00000543153 NNTQ13423 1086 aa13.82□□□□□ -0.2
RFC5-209ENST00000543153 CC2D2BQ6DHV5 1058 aa13.81□□□□□ -0.2
RFC5-209ENST00000543153 TOR4AQ9NXH8 423 aa13.81□□□□□ -0.2
RFC5-209ENST00000543153 WASHC2AQ641Q2 1341 aa13.81□□□□□ -0.2
RFC5-209ENST00000543153 NR3C2P08235 984 aa13.8□□□□□ -0.2
RFC5-209ENST00000543153 OGFOD1Q8N543 542 aa13.8□□□□□ -0.2
RFC5-209ENST00000543153 PIGBQ92521 554 aa13.8□□□□□ -0.2
RFC5-209ENST00000543153 TMPRSS4Q9NRS4 437 aa13.8□□□□□ -0.2
RFC5-209ENST00000543153 CHD4Q14839 1912 aa13.8□□□□□ -0.2
RFC5-209ENST00000543153 PKD1L3Q7Z443 1732 aa13.79□□□□□ -0.2
RFC5-209ENST00000543153 FAM196BA6NMK8 535 aa13.79□□□□□ -0.2
RFC5-209ENST00000543153 J3QL48 77 aa13.79□□□□□ -0.2
RFC5-209ENST00000543153 YBX3P16989 372 aaKnown RBP eCLIP13.79□□□□□ -0.2
RFC5-209ENST00000543153 C1QTNF8P60827 252 aa13.79□□□□□ -0.2
RFC5-209ENST00000543153 ERVK-9P63128 1117 aa13.79□□□□□ -0.2
RFC5-209ENST00000543153 GTF2IP78347 998 aa13.79□□□□□ -0.2
RFC5-209ENST00000543153 IFNL2Q8IZJ0 200 aa13.79□□□□□ -0.2
RFC5-209ENST00000543153 DNAAF2Q9NVR5 837 aaKnown RBP13.79□□□□□ -0.2
RFC5-209ENST00000543153 RBM19Q9Y4C8 960 aaKnown RBP13.79□□□□□ -0.2
RFC5-209ENST00000543153 C4BP0C0L5 1744 aa13.78□□□□□ -0.2
RFC5-209ENST00000543153 TOGARAM1Q9Y4F4 1720 aa13.78□□□□□ -0.2
RFC5-209ENST00000543153 LOC102724428A0A0B4J2F2 783 aa13.78□□□□□ -0.2
RFC5-209ENST00000543153 SIK1P57059 783 aa13.78□□□□□ -0.2
RFC5-209ENST00000543153 CYLDQ9NQC7 956 aa13.78□□□□□ -0.2
RFC5-209ENST00000543153 POLKQ9UBT6 870 aa13.78□□□□□ -0.2
RFC5-209ENST00000543153 CD2APQ9Y5K6 639 aa13.78□□□□□ -0.2
RFC5-209ENST00000543153 CLSPNQ9HAW4 1339 aa13.78□□□□□ -0.2
RFC5-209ENST00000543153 PHKG2P15735 406 aa13.77□□□□□ -0.21
RFC5-209ENST00000543153 NCAPD2Q15021 1401 aa13.77□□□□□ -0.21
RFC5-209ENST00000543153 COL24A1Q17RW2 1714 aa13.77□□□□□ -0.21
RFC5-209ENST00000543153 TRIM67Q6ZTA4 783 aa13.77□□□□□ -0.21
RFC5-209ENST00000543153 LARGE2Q8N3Y3 721 aa13.77□□□□□ -0.21
RFC5-209ENST00000543153 WWC3Q9ULE0 1092 aa13.77□□□□□ -0.21
RFC5-209ENST00000543153 PDZRN3Q9UPQ7 1066 aa13.77□□□□□ -0.21
RFC5-209ENST00000543153 ANKRD26Q9UPS8 1709 aa13.77□□□□□ -0.21
RFC5-209ENST00000543153 USP17L15C9J2P7 530 aa13.76□□□□□ -0.21
RFC5-209ENST00000543153 USP17L10C9JJH3 530 aa13.76□□□□□ -0.21
RFC5-209ENST00000543153 USP17L13C9JLJ4 530 aa13.76□□□□□ -0.21
RFC5-209ENST00000543153 USP17L12C9JPN9 530 aa13.76□□□□□ -0.21
RFC5-209ENST00000543153 USP17L11C9JVI0 530 aa13.76□□□□□ -0.21
RFC5-209ENST00000543153 USP17L21D6R901 530 aa13.76□□□□□ -0.21
RFC5-209ENST00000543153 USP17L18D6R9N7 530 aa13.76□□□□□ -0.21
RFC5-209ENST00000543153 USP17L22D6RA61 530 aa13.76□□□□□ -0.21
RFC5-209ENST00000543153 USP17L17D6RBQ6 530 aa13.76□□□□□ -0.21
RFC5-209ENST00000543153 USP17L19D6RCP7 530 aa13.76□□□□□ -0.21
RFC5-209ENST00000543153 USP17L20D6RJB6 530 aa13.76□□□□□ -0.21
RFC5-209ENST00000543153 SSFA2P28290 1259 aa13.76□□□□□ -0.21
RFC5-209ENST00000543153 USP17L24Q0WX57 530 aa13.76□□□□□ -0.21
RFC5-209ENST00000543153 EIF4A2Q14240 407 aaKnown RBP13.76□□□□□ -0.21
RFC5-209ENST00000543153 ELOAQ14241 798 aaKnown RBP13.76□□□□□ -0.21
RFC5-209ENST00000543153 SMIM5Q71RC9 77 aa13.76□□□□□ -0.21
RFC5-209ENST00000543153 LINC00116Q8NCU8 138 aa13.76□□□□□ -0.21
RFC5-209ENST00000543153 ASAP1Q9ULH1 1129 aa13.76□□□□□ -0.21
RFC5-209ENST00000543153 SMPD1P17405 629 aa13.75□□□□□ -0.21
RFC5-209ENST00000543153 SCTRP47872 440 aa13.75□□□□□ -0.21
RFC5-209ENST00000543153 RETREG2Q8NC44 543 aa13.75□□□□□ -0.21
RFC5-209ENST00000543153 NOVA2Q9UNW9 492 aaKnown RBP13.75□□□□□ -0.21
RFC5-209ENST00000543153 PDIA4P13667 645 aaKnown RBP13.74□□□□□ -0.21
RFC5-209ENST00000543153 CLDN10P78369 228 aa13.74□□□□□ -0.21
RFC5-209ENST00000543153 PTK7Q13308 1070 aa13.74□□□□□ -0.21
RFC5-209ENST00000543153 CRTC2Q53ET0 693 aaPredicted RBP13.74□□□□□ -0.21
RFC5-209ENST00000543153 AMIGO3Q86WK7 504 aa13.74□□□□□ -0.21
RFC5-209ENST00000543153 ITGB4P16144 1822 aa13.74□□□□□ -0.21
RFC5-209ENST00000543153 TAF1LQ8IZX4 1826 aa13.74□□□□□ -0.21
RFC5-209ENST00000543153 IGSF1Q8N6C5 1336 aa13.73□□□□□ -0.21
RFC5-209ENST00000543153 HSP90AB1P08238 724 aaKnown RBP13.73□□□□□ -0.21
RFC5-209ENST00000543153 HSPA5P11021 654 aaKnown RBP13.73□□□□□ -0.21
RFC5-209ENST00000543153 WDR4P57081 412 aaKnown RBP13.73□□□□□ -0.21
RFC5-209ENST00000543153 MORC1Q86VD1 984 aa13.73□□□□□ -0.21
RFC5-209ENST00000543153 CCER1Q8TC90 406 aaPredicted RBP13.73□□□□□ -0.21
RFC5-209ENST00000543153 ZNF526Q8TF50 670 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms