RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 FAM200AQ8TCP9 573 aa8.32□□□□□ -1.08
TNFRSF1A-206ENST00000535038 TRPM4Q8TD43 1214 aa8.32□□□□□ -1.08
TNFRSF1A-206ENST00000535038 IFT43Q96FT9 208 aa8.32□□□□□ -1.08
TNFRSF1A-206ENST00000535038 MBD5Q9P267 1494 aa8.32□□□□□ -1.08
TNFRSF1A-206ENST00000535038 SHANK2Q9UPX8 1470 aa8.32□□□□□ -1.08
TNFRSF1A-206ENST00000535038 PRG4Q92954 1404 aaPredicted RBP8.31□□□□□ -1.08
TNFRSF1A-206ENST00000535038 SASH3O75995 380 aa8.31□□□□□ -1.08
TNFRSF1A-206ENST00000535038 GPLD1P80108 840 aa8.31□□□□□ -1.08
TNFRSF1A-206ENST00000535038 MLLT1Q03111 559 aaPredicted RBP8.31□□□□□ -1.08
TNFRSF1A-206ENST00000535038 DDX10Q13206 875 aaKnown RBP8.31□□□□□ -1.08
TNFRSF1A-206ENST00000535038 PERM1Q5SV97 790 aa8.31□□□□□ -1.08
TNFRSF1A-206ENST00000535038 ELMSAN1Q6PJG2 1045 aa8.31□□□□□ -1.08
TNFRSF1A-206ENST00000535038 ILDR2Q71H61 639 aa8.31□□□□□ -1.08
TNFRSF1A-206ENST00000535038 DTWD1Q8N5C7 304 aa8.31□□□□□ -1.08
TNFRSF1A-206ENST00000535038 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.31□□□□□ -1.08
TNFRSF1A-206ENST00000535038 RRP7BPQ9NSQ0 103 aa8.31□□□□□ -1.08
TNFRSF1A-206ENST00000535038 NCOA1Q15788 1441 aa8.3□□□□□ -1.08
TNFRSF1A-206ENST00000535038 KDM5DQ9BY66 1539 aa8.3□□□□□ -1.08
TNFRSF1A-206ENST00000535038 ZBTB42B2RXF5 422 aa8.3□□□□□ -1.08
TNFRSF1A-206ENST00000535038 ARID4AP29374 1257 aaPredicted RBP8.3□□□□□ -1.08
TNFRSF1A-206ENST00000535038 GRIK5Q16478 980 aa8.3□□□□□ -1.08
TNFRSF1A-206ENST00000535038 CFAP70Q5T0N1 1121 aa8.3□□□□□ -1.08
TNFRSF1A-206ENST00000535038 WFDC8Q8IUA0 241 aa8.3□□□□□ -1.08
TNFRSF1A-206ENST00000535038 TP53INP1Q96A56 240 aa8.3□□□□□ -1.08
TNFRSF1A-206ENST00000535038 MPHOSPH9Q99550 1183 aa8.3□□□□□ -1.08
TNFRSF1A-206ENST00000535038 ERCC6Q03468 1493 aa8.3□□□□□ -1.08
TNFRSF1A-206ENST00000535038 SPATA31E1Q6ZUB1 1445 aa8.29□□□□□ -1.08
TNFRSF1A-206ENST00000535038 SUPT16HQ9Y5B9 1047 aaKnown RBP8.29□□□□□ -1.08
TNFRSF1A-206ENST00000535038 ARHGEF5Q12774 1597 aa8.29□□□□□ -1.08
TNFRSF1A-206ENST00000535038 SHROOM2Q13796 1616 aa8.29□□□□□ -1.08
TNFRSF1A-206ENST00000535038 CARMIL2Q6F5E8 1435 aa8.29□□□□□ -1.08
TNFRSF1A-206ENST00000535038 ZNF644Q9H582 1327 aaPredicted RBP8.29□□□□□ -1.08
TNFRSF1A-206ENST00000535038 ATP10BO94823 1461 aa8.28□□□□□ -1.08
TNFRSF1A-206ENST00000535038 RFX1P22670 979 aa8.28□□□□□ -1.08
TNFRSF1A-206ENST00000535038 FBXO11Q86XK2 927 aa8.28□□□□□ -1.08
TNFRSF1A-206ENST00000535038 TTC9Q92623 222 aa8.28□□□□□ -1.08
TNFRSF1A-206ENST00000535038 LRFN2Q9ULH4 789 aa8.28□□□□□ -1.08
TNFRSF1A-206ENST00000535038 CDK11AQ9UQ88 783 aaPredicted RBP8.28□□□□□ -1.08
TNFRSF1A-206ENST00000535038 USP20Q9Y2K6 914 aa8.28□□□□□ -1.08
TNFRSF1A-206ENST00000535038 RTCBQ9Y3I0 505 aaKnown RBP8.28□□□□□ -1.08
TNFRSF1A-206ENST00000535038 OPLAHO14841 1288 aa8.27□□□□□ -1.09
TNFRSF1A-206ENST00000535038 EIF2AK2P19525 551 aaKnown RBP8.27□□□□□ -1.09
TNFRSF1A-206ENST00000535038 NRLP54845 237 aa8.27□□□□□ -1.09
TNFRSF1A-206ENST00000535038 PLAURQ03405 335 aa8.27□□□□□ -1.09
TNFRSF1A-206ENST00000535038 CDCA8Q53HL2 280 aa8.27□□□□□ -1.09
TNFRSF1A-206ENST00000535038 ARTNQ5T4W7 220 aa8.27□□□□□ -1.09
TNFRSF1A-206ENST00000535038 HFE2Q6ZVN8 426 aa8.27□□□□□ -1.09
TNFRSF1A-206ENST00000535038 TREML1Q86YW5 311 aa8.27□□□□□ -1.09
TNFRSF1A-206ENST00000535038 RGL4Q8IZJ4 473 aa8.27□□□□□ -1.09
TNFRSF1A-206ENST00000535038 SMG9Q9H0W8 520 aaKnown RBP8.27□□□□□ -1.09
TNFRSF1A-206ENST00000535038 ZFP64Q9NPA5 681 aa8.27□□□□□ -1.09
TNFRSF1A-206ENST00000535038 XYLBO75191 536 aa8.26□□□□□ -1.09
TNFRSF1A-206ENST00000535038 EGFRP00533 1210 aa8.26□□□□□ -1.09
TNFRSF1A-206ENST00000535038 CMTR1Q8N1G2 835 aaKnown RBP8.26□□□□□ -1.09
TNFRSF1A-206ENST00000535038 SSBP4Q9BWG4 385 aaPredicted RBP8.26□□□□□ -1.09
TNFRSF1A-206ENST00000535038 TLR7Q9NYK1 1049 aaKnown RBP8.26□□□□□ -1.09
TNFRSF1A-206ENST00000535038 ZNF777Q9ULD5 760 aaPredicted RBP8.26□□□□□ -1.09
TNFRSF1A-206ENST00000535038 NOVA2Q9UNW9 492 aaKnown RBP8.26□□□□□ -1.09
TNFRSF1A-206ENST00000535038 PTPRGP23470 1445 aa8.26□□□□□ -1.09
TNFRSF1A-206ENST00000535038 WASHC2AQ641Q2 1341 aa8.26□□□□□ -1.09
TNFRSF1A-206ENST00000535038 HSPA5P11021 654 aaKnown RBP8.25□□□□□ -1.09
TNFRSF1A-206ENST00000535038 FKBP5Q13451 457 aaPredicted RBP8.25□□□□□ -1.09
TNFRSF1A-206ENST00000535038 WFDC12Q8WWY7 111 aa8.25□□□□□ -1.09
TNFRSF1A-206ENST00000535038 KRTAP4-8Q9BYQ9 185 aa8.25□□□□□ -1.09
TNFRSF1A-206ENST00000535038 KIAA1107Q9UPP5 1409 aa8.25□□□□□ -1.09
TNFRSF1A-206ENST00000535038 PREX2Q70Z35 1606 aa8.25□□□□□ -1.09
TNFRSF1A-206ENST00000535038 CDC42BPBQ9Y5S2 1711 aa8.24□□□□□ -1.09
TNFRSF1A-206ENST00000535038 MAST1Q9Y2H9 1570 aa8.24□□□□□ -1.09
TNFRSF1A-206ENST00000535038 UHRF1BP1Q6BDS2 1440 aa8.24□□□□□ -1.09
TNFRSF1A-206ENST00000535038 CNTLNQ9NXG0 1405 aa8.24□□□□□ -1.09
TNFRSF1A-206ENST00000535038 PSAPP07602 524 aa8.24□□□□□ -1.09
TNFRSF1A-206ENST00000535038 IREB2P48200 963 aaKnown RBP8.24□□□□□ -1.09
TNFRSF1A-206ENST00000535038 SWI5Q1ZZU3 235 aa8.24□□□□□ -1.09
TNFRSF1A-206ENST00000535038 COX20Q5RI15 118 aa8.24□□□□□ -1.09
TNFRSF1A-206ENST00000535038 IGF2-ASQ6U949 168 aa8.24□□□□□ -1.09
TNFRSF1A-206ENST00000535038 NBPF8Q3BBV2 869 aa8.23□□□□□ -1.09
TNFRSF1A-206ENST00000535038 PLD4Q96BZ4 506 aa8.23□□□□□ -1.09
TNFRSF1A-206ENST00000535038 PRIMPOLQ96LW4 560 aa8.23□□□□□ -1.09
TNFRSF1A-206ENST00000535038 PSMG3-AS1Q96PY0 264 aa8.23□□□□□ -1.09
TNFRSF1A-206ENST00000535038 HIRIP3Q9BW71 556 aaPredicted RBP8.23□□□□□ -1.09
TNFRSF1A-206ENST00000535038 CHD1O14646 1710 aa8.23□□□□□ -1.09
TNFRSF1A-206ENST00000535038 CCDC7Q96M83 1385 aa8.22□□□□□ -1.09
TNFRSF1A-206ENST00000535038 SAMD9LQ8IVG5 1584 aa8.22□□□□□ -1.09
TNFRSF1A-206ENST00000535038 LOC102724428A0A0B4J2F2 783 aa8.22□□□□□ -1.09
TNFRSF1A-206ENST00000535038 ANP32CO43423 234 aa8.22□□□□□ -1.09
TNFRSF1A-206ENST00000535038 PRMT3O60678 531 aa8.22□□□□□ -1.09
TNFRSF1A-206ENST00000535038 DEAF1O75398 565 aaPredicted RBP8.22□□□□□ -1.09
TNFRSF1A-206ENST00000535038 GHRHP01286 108 aa8.22□□□□□ -1.09
TNFRSF1A-206ENST00000535038 NOS3P29474 1203 aa8.22□□□□□ -1.09
TNFRSF1A-206ENST00000535038 SIK1P57059 783 aa8.22□□□□□ -1.09
TNFRSF1A-206ENST00000535038 NBPF11Q86T75 865 aa8.22□□□□□ -1.09
TNFRSF1A-206ENST00000535038 KCNMB2Q9Y691 235 aa8.22□□□□□ -1.09
TNFRSF1A-206ENST00000535038 ARHGEF12Q9NZN5 1544 aa8.22□□□□□ -1.09
TNFRSF1A-206ENST00000535038 ANKRD30AQ9BXX3 1397 aa8.22□□□□□ -1.09
TNFRSF1A-206ENST00000535038 J3QW42 95 aa8.21□□□□□ -1.1
TNFRSF1A-206ENST00000535038 MMP20O60882 483 aa8.21□□□□□ -1.1
TNFRSF1A-206ENST00000535038 SOX18P35713 384 aa8.21□□□□□ -1.1
TNFRSF1A-206ENST00000535038 LRP8Q14114 963 aa8.21□□□□□ -1.1
TNFRSF1A-206ENST00000535038 NSUN5Q96P11 429 aaKnown RBP8.21□□□□□ -1.1
TNFRSF1A-206ENST00000535038 RBSNQ9H1K0 784 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms