RNA–Protein interactions for RNA: ENST00000527683.1

LINC01001-202, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 1 (best)

Gene LINC01001, Length 683 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-202ENST00000527683 ADCY9O60503 1353 aa7.73□□□□□ -1.17
LINC01001-202ENST00000527683 LILRA1O75019 489 aa7.73□□□□□ -1.17
LINC01001-202ENST00000527683 TGFB2P61812 414 aa7.73□□□□□ -1.17
LINC01001-202ENST00000527683 NFX1Q12986 1120 aaKnown RBP7.73□□□□□ -1.17
LINC01001-202ENST00000527683 Q6ZVU0 165 aa7.73□□□□□ -1.17
LINC01001-202ENST00000527683 AKAP12Q02952 1782 aa7.72□□□□□ -1.17
LINC01001-202ENST00000527683 A0A0G2JLW4 131 aa7.72□□□□□ -1.17
LINC01001-202ENST00000527683 ERVH48-1M5A8F1 160 aa7.72□□□□□ -1.17
LINC01001-202ENST00000527683 PPM1GO15355 546 aaPredicted RBP7.72□□□□□ -1.17
LINC01001-202ENST00000527683 MMP10P09238 476 aa7.72□□□□□ -1.17
LINC01001-202ENST00000527683 TRAPPC3LQ5T215 181 aa7.72□□□□□ -1.17
LINC01001-202ENST00000527683 NLGN1Q8N2Q7 840 aa7.72□□□□□ -1.17
LINC01001-202ENST00000527683 SLC4A9Q96Q91 983 aa7.72□□□□□ -1.17
LINC01001-202ENST00000527683 SENP2Q9HC62 589 aa7.72□□□□□ -1.17
LINC01001-202ENST00000527683 TMOD3Q9NYL9 352 aa7.72□□□□□ -1.17
LINC01001-202ENST00000527683 POLKQ9UBT6 870 aa7.72□□□□□ -1.17
LINC01001-202ENST00000527683 BTAF1O14981 1849 aa7.72□□□□□ -1.17
LINC01001-202ENST00000527683 ANKRD26Q9UPS8 1709 aa7.72□□□□□ -1.17
LINC01001-202ENST00000527683 FLT4P35916 1363 aa7.71□□□□□ -1.17
LINC01001-202ENST00000527683 KIF24Q5T7B8 1368 aa7.71□□□□□ -1.17
LINC01001-202ENST00000527683 KAT6BQ8WYB5 2073 aa7.71□□□□□ -1.17
LINC01001-202ENST00000527683 TOMM70O94826 608 aa7.71□□□□□ -1.18
LINC01001-202ENST00000527683 PHKG2P15735 406 aa7.71□□□□□ -1.18
LINC01001-202ENST00000527683 KCNA3P22001 575 aa7.71□□□□□ -1.18
LINC01001-202ENST00000527683 RAB15P59190 212 aa7.71□□□□□ -1.18
LINC01001-202ENST00000527683 MCM6Q14566 821 aa7.71□□□□□ -1.18
LINC01001-202ENST00000527683 C6orf118Q5T5N4 469 aa7.71□□□□□ -1.18
LINC01001-202ENST00000527683 DZIP3Q86Y13 1208 aaKnown RBP7.71□□□□□ -1.18
LINC01001-202ENST00000527683 IFNL2Q8IZJ0 200 aa7.71□□□□□ -1.18
LINC01001-202ENST00000527683 AGBL1Q96MI9 1066 aa7.71□□□□□ -1.18
LINC01001-202ENST00000527683 PANK3Q9H999 370 aa7.71□□□□□ -1.18
LINC01001-202ENST00000527683 GTF3C3Q9Y5Q9 886 aa7.71□□□□□ -1.18
LINC01001-202ENST00000527683 NDUFB9Q9Y6M9 179 aa7.71□□□□□ -1.18
LINC01001-202ENST00000527683 SHANK3Q9BYB0 1731 aa7.7□□□□□ -1.18
LINC01001-202ENST00000527683 DPEP1P16444 411 aa7.7□□□□□ -1.18
LINC01001-202ENST00000527683 HNRNPUQ00839 825 aaKnown RBP eCLIP7.7□□□□□ -1.18
LINC01001-202ENST00000527683 NR1H3Q13133 447 aa7.7□□□□□ -1.18
LINC01001-202ENST00000527683 TREML4Q6UXN2 200 aa7.7□□□□□ -1.18
LINC01001-202ENST00000527683 ARHGAP27Q6ZUM4 889 aa7.7□□□□□ -1.18
LINC01001-202ENST00000527683 LINC00528Q8N1L1 170 aa7.7□□□□□ -1.18
LINC01001-202ENST00000527683 BCS1LQ9Y276 419 aa7.7□□□□□ -1.18
LINC01001-202ENST00000527683 RTCBQ9Y3I0 505 aaKnown RBP7.7□□□□□ -1.18
LINC01001-202ENST00000527683 KNSTRNQ9Y448 316 aa7.7□□□□□ -1.18
LINC01001-202ENST00000527683 WNK3Q9BYP7 1800 aa7.7□□□□□ -1.18
LINC01001-202ENST00000527683 ZBED9Q6R2W3 1325 aa7.7□□□□□ -1.18
LINC01001-202ENST00000527683 SMG6Q86US8 1419 aaKnown RBP7.69□□□□□ -1.18
LINC01001-202ENST00000527683 MON2Q7Z3U7 1717 aa7.69□□□□□ -1.18
LINC01001-202ENST00000527683 ERVV-2B6SEH9 535 aa7.69□□□□□ -1.18
LINC01001-202ENST00000527683 RPS6KA4O75676 772 aa7.69□□□□□ -1.18
LINC01001-202ENST00000527683 GYS1P13807 737 aa7.69□□□□□ -1.18
LINC01001-202ENST00000527683 KIFC2Q96AC6 838 aa7.69□□□□□ -1.18
LINC01001-202ENST00000527683 GDPD2Q9HCC8 539 aa7.69□□□□□ -1.18
LINC01001-202ENST00000527683 NMRK2Q9NPI5 230 aa7.69□□□□□ -1.18
LINC01001-202ENST00000527683 CDV3Q9UKY7 258 aaKnown RBP7.69□□□□□ -1.18
LINC01001-202ENST00000527683 PCDHB9Q9Y5E1 797 aa7.69□□□□□ -1.18
LINC01001-202ENST00000527683 CHD4Q14839 1912 aa7.69□□□□□ -1.18
LINC01001-202ENST00000527683 USP54Q70EL1 1684 aa7.69□□□□□ -1.18
LINC01001-202ENST00000527683 NSD3Q9BZ95 1437 aa7.69□□□□□ -1.18
LINC01001-202ENST00000527683 KIF20BQ96Q89 1820 aa7.68□□□□□ -1.18
LINC01001-202ENST00000527683 VEGFBP49765 207 aa7.68□□□□□ -1.18
LINC01001-202ENST00000527683 EIF4A2Q14240 407 aaKnown RBP7.68□□□□□ -1.18
LINC01001-202ENST00000527683 TSGA10IPQ3SY00 556 aa7.68□□□□□ -1.18
LINC01001-202ENST00000527683 CCDC184Q52MB2 194 aa7.68□□□□□ -1.18
LINC01001-202ENST00000527683 FAM9BQ8IZU0 186 aa7.68□□□□□ -1.18
LINC01001-202ENST00000527683 DNMT3LQ9UJW3 386 aa7.68□□□□□ -1.18
LINC01001-202ENST00000527683 COL24A1Q17RW2 1714 aa7.68□□□□□ -1.18
LINC01001-202ENST00000527683 TERTO14746 1132 aaKnown RBP7.67□□□□□ -1.18
LINC01001-202ENST00000527683 RFC4P35249 363 aa7.67□□□□□ -1.18
LINC01001-202ENST00000527683 C9orf131Q5VYM1 1079 aa7.67□□□□□ -1.18
LINC01001-202ENST00000527683 PNMA1Q8ND90 353 aa7.67□□□□□ -1.18
LINC01001-202ENST00000527683 POM121Q96HA1 1249 aa7.67□□□□□ -1.18
LINC01001-202ENST00000527683 DCAF5Q96JK2 942 aa7.67□□□□□ -1.18
LINC01001-202ENST00000527683 CCDC87Q9NVE4 849 aa7.67□□□□□ -1.18
LINC01001-202ENST00000527683 PARP3Q9Y6F1 533 aa7.67□□□□□ -1.18
LINC01001-202ENST00000527683 NCAPD2Q15021 1401 aa7.67□□□□□ -1.18
LINC01001-202ENST00000527683 FAM208AQ9UK61 1670 aaKnown RBP7.67□□□□□ -1.18
LINC01001-202ENST00000527683 HSP90AB1P08238 724 aaKnown RBP7.66□□□□□ -1.18
LINC01001-202ENST00000527683 BMP2P12643 396 aa7.66□□□□□ -1.18
LINC01001-202ENST00000527683 TNNT2P45379 298 aaPredicted RBP7.66□□□□□ -1.18
LINC01001-202ENST00000527683 SCTRP47872 440 aa7.66□□□□□ -1.18
LINC01001-202ENST00000527683 CABP4P57796 275 aa7.66□□□□□ -1.18
LINC01001-202ENST00000527683 NBPF20Q3BBV1 942 aa7.66□□□□□ -1.18
LINC01001-202ENST00000527683 PLEKHO1Q53GL0 409 aaPredicted RBP7.66□□□□□ -1.18
LINC01001-202ENST00000527683 NFATC2IPQ8NCF5 419 aa7.66□□□□□ -1.18
LINC01001-202ENST00000527683 PNISRQ8TF01 805 aaKnown RBP7.66□□□□□ -1.18
LINC01001-202ENST00000527683 PIM2Q9P1W9 311 aa7.66□□□□□ -1.18
LINC01001-202ENST00000527683 SPINT1O43278 529 aa7.65□□□□□ -1.18
LINC01001-202ENST00000527683 LY75O60449 1722 aa7.65□□□□□ -1.18
LINC01001-202ENST00000527683 PTCD1O75127 700 aaKnown RBP7.65□□□□□ -1.18
LINC01001-202ENST00000527683 TM4SF1P30408 202 aa7.65□□□□□ -1.18
LINC01001-202ENST00000527683 MTHFSP49914 203 aa7.65□□□□□ -1.18
LINC01001-202ENST00000527683 HTRA3P83110 453 aa7.65□□□□□ -1.18
LINC01001-202ENST00000527683 SCARF1Q14162 830 aa7.65□□□□□ -1.18
LINC01001-202ENST00000527683 CC2D1BQ5T0F9 858 aaKnown RBP7.65□□□□□ -1.18
LINC01001-202ENST00000527683 INTS5Q6P9B9 1019 aaKnown RBP7.65□□□□□ -1.18
LINC01001-202ENST00000527683 CNTNAP4Q9C0A0 1308 aa7.65□□□□□ -1.18
LINC01001-202ENST00000527683 RRAGCQ9HB90 399 aa7.65□□□□□ -1.18
LINC01001-202ENST00000527683 CYLDQ9NQC7 956 aa7.65□□□□□ -1.18
LINC01001-202ENST00000527683 PGPEP1Q9NXJ5 209 aa7.65□□□□□ -1.18
LINC01001-202ENST00000527683 SRP68Q9UHB9 627 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms