RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 ANKLE1Q8NAG6 615 aa3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 GPATCH3Q96I76 525 aa3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 HS3ST6Q96QI5 342 aa3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 OSBPL7Q9BZF2 842 aa3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 METTL14Q9HCE5 456 aaKnown RBP3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 FAM8A1Q9UBU6 413 aa3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 STRIP2Q9ULQ0 834 aa3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 INPP5FQ9Y2H2 1132 aa3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 USP3Q9Y6I4 520 aa3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 BIVM-ERCC5R4GMW8 1640 aa3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 DLC1Q96QB1 1528 aa3.54□□□□□ -1.84
CKS1BP2-201ENST00000497342 MIA2Q96PC5 1412 aa3.53□□□□□ -1.84
CKS1BP2-201ENST00000497342 SERTM1A2A2V5 107 aa3.53□□□□□ -1.84
CKS1BP2-201ENST00000497342 PLEKHD1A6NEE1 506 aa3.53□□□□□ -1.84
CKS1BP2-201ENST00000497342 GOLGA8CPA6NN73 597 aa3.53□□□□□ -1.84
CKS1BP2-201ENST00000497342 OPLAHO14841 1288 aa3.53□□□□□ -1.84
CKS1BP2-201ENST00000497342 TOMM70O94826 608 aa3.53□□□□□ -1.84
CKS1BP2-201ENST00000497342 ADH1CP00326 375 aa3.53□□□□□ -1.84
CKS1BP2-201ENST00000497342 NOS2P35228 1153 aa3.53□□□□□ -1.84
CKS1BP2-201ENST00000497342 GTF2F1P35269 517 aaKnown RBP eCLIP3.53□□□□□ -1.84
CKS1BP2-201ENST00000497342 SOX9P48436 509 aa3.53□□□□□ -1.84
CKS1BP2-201ENST00000497342 AGERQ15109 404 aa3.53□□□□□ -1.84
CKS1BP2-201ENST00000497342 TCEAL1Q15170 157 aa3.53□□□□□ -1.84
CKS1BP2-201ENST00000497342 TAF1CQ15572 869 aaPredicted RBP3.53□□□□□ -1.84
CKS1BP2-201ENST00000497342 HIF1AQ16665 826 aa3.53□□□□□ -1.84
CKS1BP2-201ENST00000497342 ZNF394Q53GI3 561 aa3.53□□□□□ -1.84
CKS1BP2-201ENST00000497342 PDE12Q6L8Q7 609 aaKnown RBP3.53□□□□□ -1.84
CKS1BP2-201ENST00000497342 Q6ZVU0 165 aa3.53□□□□□ -1.84
CKS1BP2-201ENST00000497342 ZNF526Q8TF50 670 aaPredicted RBP3.53□□□□□ -1.84
CKS1BP2-201ENST00000497342 EDEM1Q92611 657 aa3.53□□□□□ -1.84
CKS1BP2-201ENST00000497342 GPRASP2Q96D09 838 aa3.53□□□□□ -1.84
CKS1BP2-201ENST00000497342 BCS1LQ9Y276 419 aa3.53□□□□□ -1.84
CKS1BP2-201ENST00000497342 MSRB2Q9Y3D2 182 aa3.53□□□□□ -1.84
CKS1BP2-201ENST00000497342 CHMP3Q9Y3E7 222 aa3.53□□□□□ -1.84
CKS1BP2-201ENST00000497342 GLI3P10071 1580 aa3.53□□□□□ -1.84
CKS1BP2-201ENST00000497342 MYOM1P52179 1685 aa3.52□□□□□ -1.85
CKS1BP2-201ENST00000497342 ADCY9O60503 1353 aa3.52□□□□□ -1.85
CKS1BP2-201ENST00000497342 MAP3K5Q99683 1374 aa3.52□□□□□ -1.85
CKS1BP2-201ENST00000497342 MAST1Q9Y2H9 1570 aa3.52□□□□□ -1.85
CKS1BP2-201ENST00000497342 CCDC85CA6NKD9 419 aa3.52□□□□□ -1.85
CKS1BP2-201ENST00000497342 TGFBR3LH3BV60 316 aa3.52□□□□□ -1.85
CKS1BP2-201ENST00000497342 KLF4O43474 513 aa3.52□□□□□ -1.85
CKS1BP2-201ENST00000497342 STAU1O95793 577 aaKnown RBP3.52□□□□□ -1.85
CKS1BP2-201ENST00000497342 ITGBL1O95965 494 aaPredicted RBP3.52□□□□□ -1.85
CKS1BP2-201ENST00000497342 S1PR4O95977 384 aa3.52□□□□□ -1.85
CKS1BP2-201ENST00000497342 EGFRP00533 1210 aa3.52□□□□□ -1.85
CKS1BP2-201ENST00000497342 DNAJA1P31689 397 aaKnown RBP3.52□□□□□ -1.85
CKS1BP2-201ENST00000497342 GPC1P35052 558 aa3.52□□□□□ -1.85
CKS1BP2-201ENST00000497342 ADD1P35611 737 aaKnown RBP3.52□□□□□ -1.85
CKS1BP2-201ENST00000497342 HNRNPMP52272 730 aaKnown RBP eCLIP3.52□□□□□ -1.85
CKS1BP2-201ENST00000497342 MAP3K10Q02779 954 aa3.52□□□□□ -1.85
CKS1BP2-201ENST00000497342 ORC1Q13415 861 aa3.52□□□□□ -1.85
CKS1BP2-201ENST00000497342 GGT6Q6P531 493 aa3.52□□□□□ -1.85
CKS1BP2-201ENST00000497342 ATCAYQ86WG3 371 aa3.52□□□□□ -1.85
CKS1BP2-201ENST00000497342 CCDC116Q8IYX3 515 aa3.52□□□□□ -1.85
CKS1BP2-201ENST00000497342 TMC1Q8TDI8 760 aa3.52□□□□□ -1.85
CKS1BP2-201ENST00000497342 IFT43Q96FT9 208 aa3.52□□□□□ -1.85
CKS1BP2-201ENST00000497342 GGNBP2Q9H3C7 697 aa3.52□□□□□ -1.85
CKS1BP2-201ENST00000497342 TMPRSS4Q9NRS4 437 aa3.52□□□□□ -1.85
CKS1BP2-201ENST00000497342 ZDHHC3Q9NYG2 299 aa3.52□□□□□ -1.85
CKS1BP2-201ENST00000497342 SIRPGQ9P1W8 387 aa3.52□□□□□ -1.85
CKS1BP2-201ENST00000497342 NOP58Q9Y2X3 529 aaKnown RBP3.52□□□□□ -1.85
CKS1BP2-201ENST00000497342 PRKAB1Q9Y478 270 aa3.52□□□□□ -1.85
CKS1BP2-201ENST00000497342 NKTRP30414 1462 aaKnown RBP3.52□□□□□ -1.85
CKS1BP2-201ENST00000497342 KDM5AP29375 1690 aaKnown RBP3.52□□□□□ -1.85
CKS1BP2-201ENST00000497342 CACNA1GO43497 2377 aa3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 RGPD1P0DJD0 1748 aa3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 FAM205CA6NFA0 338 aa3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 TNFRSF21O75509 655 aa3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 STK10O94804 968 aaKnown RBP3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 ZBTB7AO95365 584 aa3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 ADH1AP07327 375 aa3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 PCSK2P16519 638 aa3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 PAK2Q13177 524 aa3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 PWP1Q13610 501 aa3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 PTPROQ16827 1216 aa3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 PPP1R26Q5T8A7 1209 aaPredicted RBP3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 CCDC181Q5TID7 509 aa3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 PRPF40BQ6NWY9 871 aaKnown RBP3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 TREML1Q86YW5 311 aa3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 UNC5CLQ8IV45 518 aa3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 GALNT12Q8IXK2 581 aa3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 C3orf58Q8NDZ4 430 aa3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 ZCRB1Q8TBF4 217 aaKnown RBP3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 SNX29Q8TEQ0 813 aa3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 ZNF516Q92618 1163 aa3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 CNKSR1Q969H4 720 aa3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 L3MBTL2Q969R5 705 aa3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 CCDC74AQ96AQ1 378 aa3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 NUDT16Q96DE0 195 aaKnown RBP3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 PDGFDQ9GZP0 370 aaPredicted RBP3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 ZSWIM4Q9H7M6 989 aa3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 ZFYVE28Q9HCC9 887 aa3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 TYW1Q9NV66 732 aaKnown RBP3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 SERTAD1Q9UHV2 236 aa3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 PPM1HQ9ULR3 514 aa3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 GOLGA3Q08378 1498 aa3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 ARHGAP35Q9NRY4 1499 aa3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 MROH1Q8NDA8 1641 aa3.51□□□□□ -1.85
CKS1BP2-201ENST00000497342 NCOA2Q15596 1464 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms