RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 SCN9AQ15858 1988 aa15.42■□□□□ 0.06
ATG3-209ENST00000496423 CEP290O15078 2479 aa15.41■□□□□ 0.06
ATG3-209ENST00000496423 IGF2BP3O00425 579 aaKnown RBP eCLIP15.41■□□□□ 0.06
ATG3-209ENST00000496423 UFL1O94874 794 aa15.41■□□□□ 0.06
ATG3-209ENST00000496423 KIF22Q14807 665 aa15.41■□□□□ 0.06
ATG3-209ENST00000496423 GMLQ99445 158 aa15.41■□□□□ 0.06
ATG3-209ENST00000496423 COL3A1P02461 1466 aaPredicted RBP15.4■□□□□ 0.06
ATG3-209ENST00000496423 U2AF1L5P0DN76 240 aaPredicted RBP15.4■□□□□ 0.06
ATG3-209ENST00000496423 HSP90B1P14625 803 aaKnown RBP15.4■□□□□ 0.06
ATG3-209ENST00000496423 U2AF1Q01081 240 aaKnown RBP eCLIP15.4■□□□□ 0.06
ATG3-209ENST00000496423 C1QBPQ07021 282 aaKnown RBP15.4■□□□□ 0.06
ATG3-209ENST00000496423 WNK4Q96J92 1243 aa15.4■□□□□ 0.06
ATG3-209ENST00000496423 PTCH2Q9Y6C5 1203 aa15.4■□□□□ 0.06
ATG3-209ENST00000496423 MYO3BQ8WXR4 1341 aa15.4■□□□□ 0.06
ATG3-209ENST00000496423 PSME4Q14997 1843 aa15.39■□□□□ 0.05
ATG3-209ENST00000496423 WNT10BO00744 389 aa15.39■□□□□ 0.05
ATG3-209ENST00000496423 MYCP01106 439 aaPredicted RBP15.39■□□□□ 0.05
ATG3-209ENST00000496423 THUMPD2Q9BTF0 503 aaKnown RBP15.39■□□□□ 0.05
ATG3-209ENST00000496423 SZT2Q5T011 3432 aa15.39■□□□□ 0.05
ATG3-209ENST00000496423 WTIPA6NIX2 430 aaPredicted RBP15.38■□□□□ 0.05
ATG3-209ENST00000496423 EIF2S2P20042 333 aaKnown RBP15.38■□□□□ 0.05
ATG3-209ENST00000496423 MAP3K11Q16584 847 aa15.38■□□□□ 0.05
ATG3-209ENST00000496423 GPR153Q6NV75 609 aa15.38■□□□□ 0.05
ATG3-209ENST00000496423 ZFYVE28Q9HCC9 887 aa15.38■□□□□ 0.05
ATG3-209ENST00000496423 CUL9Q8IWT3 2517 aa15.37■□□□□ 0.05
ATG3-209ENST00000496423 GNRH1P01148 92 aa15.37■□□□□ 0.05
ATG3-209ENST00000496423 PRMT2P55345 433 aa15.37■□□□□ 0.05
ATG3-209ENST00000496423 AIMP1Q12904 312 aaKnown RBP15.37■□□□□ 0.05
ATG3-209ENST00000496423 SUPT20HL1Q3ZLR7 823 aa15.37■□□□□ 0.05
ATG3-209ENST00000496423 COPS6Q7L5N1 327 aa15.37■□□□□ 0.05
ATG3-209ENST00000496423 PRO3102Q9H379 93 aa15.37■□□□□ 0.05
ATG3-209ENST00000496423 IREB2P48200 963 aaKnown RBP15.36■□□□□ 0.05
ATG3-209ENST00000496423 CENPFP49454 3210 aa15.36■□□□□ 0.05
ATG3-209ENST00000496423 HTTP42858 3142 aa15.35■□□□□ 0.05
ATG3-209ENST00000496423 COL1A1P02452 1464 aaPredicted RBP15.35■□□□□ 0.05
ATG3-209ENST00000496423 LAMB1P07942 1786 aa15.35■□□□□ 0.05
ATG3-209ENST00000496423 FBXW7Q969H0 707 aa15.35■□□□□ 0.05
ATG3-209ENST00000496423 COL25A1Q9BXS0 654 aaPredicted RBP15.35■□□□□ 0.05
ATG3-209ENST00000496423 STXBP5LQ9Y2K9 1186 aa15.35■□□□□ 0.05
ATG3-209ENST00000496423 PPP2R3BQ9Y5P8 575 aa15.35■□□□□ 0.05
ATG3-209ENST00000496423 A0A0C4DFX4 3053 aa15.35■□□□□ 0.05
ATG3-209ENST00000496423 TESPA1A2RU30 521 aaPredicted RBP15.34■□□□□ 0.05
ATG3-209ENST00000496423 ATP2B4P23634 1241 aa15.34■□□□□ 0.05
ATG3-209ENST00000496423 TAF1CQ15572 869 aaPredicted RBP15.34■□□□□ 0.05
ATG3-209ENST00000496423 DEFB123Q8N688 67 aa15.34■□□□□ 0.05
ATG3-209ENST00000496423 SH3TC2Q8TF17 1288 aa15.34■□□□□ 0.05
ATG3-209ENST00000496423 FAM89AQ96GI7 184 aa15.34■□□□□ 0.05
ATG3-209ENST00000496423 ZBTB7BO15156 539 aaPredicted RBP15.33■□□□□ 0.04
ATG3-209ENST00000496423 PER1O15534 1290 aaPredicted RBP15.33■□□□□ 0.04
ATG3-209ENST00000496423 CNGB1Q14028 1251 aaPredicted RBP15.33■□□□□ 0.04
ATG3-209ENST00000496423 PDIA6Q15084 440 aa15.33■□□□□ 0.04
ATG3-209ENST00000496423 STRIP1Q5VSL9 837 aa15.33■□□□□ 0.04
ATG3-209ENST00000496423 ANKRD13AQ8IZ07 590 aa15.33■□□□□ 0.04
ATG3-209ENST00000496423 XAGE3Q8WTP9 111 aa15.33■□□□□ 0.04
ATG3-209ENST00000496423 LRCH3Q96II8 777 aa15.33■□□□□ 0.04
ATG3-209ENST00000496423 DEFB129Q9H1M3 183 aa15.33■□□□□ 0.04
ATG3-209ENST00000496423 XDHP47989 1333 aa15.33■□□□□ 0.04
ATG3-209ENST00000496423 ZNF646O15015 1829 aaPredicted RBP15.32■□□□□ 0.04
ATG3-209ENST00000496423 EVI5O60447 810 aa15.32■□□□□ 0.04
ATG3-209ENST00000496423 SASH1O94885 1247 aa15.32■□□□□ 0.04
ATG3-209ENST00000496423 CAPN2P17655 700 aa15.32■□□□□ 0.04
ATG3-209ENST00000496423 LRP10Q7Z4F1 713 aa15.32■□□□□ 0.04
ATG3-209ENST00000496423 CLMNQ96JQ2 1002 aa15.32■□□□□ 0.04
ATG3-209ENST00000496423 IRS4O14654 1257 aaPredicted RBP15.31■□□□□ 0.04
ATG3-209ENST00000496423 MYO1BO43795 1136 aa15.31■□□□□ 0.04
ATG3-209ENST00000496423 HOXD10P28358 340 aa15.31■□□□□ 0.04
ATG3-209ENST00000496423 COL6A3P12111 3177 aa15.3■□□□□ 0.04
ATG3-209ENST00000496423 SOX1O00570 391 aaPredicted RBP15.3■□□□□ 0.04
ATG3-209ENST00000496423 ANXA1P04083 346 aa15.3■□□□□ 0.04
ATG3-209ENST00000496423 GJA8P48165 433 aa15.3■□□□□ 0.04
ATG3-209ENST00000496423 CCDC152Q4G0S7 254 aa15.3■□□□□ 0.04
ATG3-209ENST00000496423 DACT2Q5SW24 774 aa15.3■□□□□ 0.04
ATG3-209ENST00000496423 PTPN18Q99952 460 aa15.3■□□□□ 0.04
ATG3-209ENST00000496423 TSPYL4Q9UJ04 414 aa15.3■□□□□ 0.04
ATG3-209ENST00000496423 FZD1Q9UP38 647 aa15.3■□□□□ 0.04
ATG3-209ENST00000496423 GJB1P08034 283 aa15.29■□□□□ 0.04
ATG3-209ENST00000496423 GTF2A2P52657 109 aa15.29■□□□□ 0.04
ATG3-209ENST00000496423 UBXN2AP68543 259 aa15.29■□□□□ 0.04
ATG3-209ENST00000496423 DLGAP5Q15398 846 aa15.29■□□□□ 0.04
ATG3-209ENST00000496423 HELBQ8NG08 1087 aaPredicted RBP15.29■□□□□ 0.04
ATG3-209ENST00000496423 PROSER3Q2NL68 480 aa15.28■□□□□ 0.04
ATG3-209ENST00000496423 RTL5Q5HYW3 569 aaPredicted RBP15.28■□□□□ 0.04
ATG3-209ENST00000496423 TTLL5Q6EMB2 1281 aa15.28■□□□□ 0.04
ATG3-209ENST00000496423 ANKRD18AQ8IVF6 992 aa15.28■□□□□ 0.04
ATG3-209ENST00000496423 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.28■□□□□ 0.04
ATG3-209ENST00000496423 PLBD2Q8NHP8 589 aa15.28■□□□□ 0.04
ATG3-209ENST00000496423 COA1Q9GZY4 146 aa15.28■□□□□ 0.04
ATG3-209ENST00000496423 BIN2Q9UBW5 565 aaPredicted RBP15.28■□□□□ 0.04
ATG3-209ENST00000496423 STAP2Q9UGK3 403 aa15.28■□□□□ 0.04
ATG3-209ENST00000496423 BRCA2P51587 3418 aa15.27■□□□□ 0.04
ATG3-209ENST00000496423 LACTBP83111 547 aaPredicted RBP15.27■□□□□ 0.04
ATG3-209ENST00000496423 CAP1Q01518 475 aa15.27■□□□□ 0.04
ATG3-209ENST00000496423 RAET1EQ8TD07 263 aa15.27■□□□□ 0.04
ATG3-209ENST00000496423 ZNF428Q96B54 188 aa15.27■□□□□ 0.04
ATG3-209ENST00000496423 OPTNQ96CV9 577 aa15.27■□□□□ 0.04
ATG3-209ENST00000496423 SHISA4Q96DD7 197 aa15.27■□□□□ 0.04
ATG3-209ENST00000496423 TRIM47Q96LD4 638 aa15.27■□□□□ 0.04
ATG3-209ENST00000496423 ISCA1Q9BUE6 129 aa15.27■□□□□ 0.04
ATG3-209ENST00000496423 RNF208Q9H0X6 261 aa15.27■□□□□ 0.04
ATG3-209ENST00000496423 PNNQ9H307 717 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms