RNA–Protein interactions for RNA: ENST00000494829.1

RUNX1-217, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 3,622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-217ENST00000494829 HDAC5Q9UQL6 1122 aa6.89□□□□□ -1.31
RUNX1-217ENST00000494829 CNPY2Q9Y2B0 182 aa6.89□□□□□ -1.31
RUNX1-217ENST00000494829 LAMB2P55268 1798 aa6.88□□□□□ -1.31
RUNX1-217ENST00000494829 CDHR2Q9BYE9 1310 aa6.88□□□□□ -1.31
RUNX1-217ENST00000494829 IFIT1P09914 478 aaKnown RBP6.88□□□□□ -1.31
RUNX1-217ENST00000494829 HSPD1P10809 573 aaKnown RBP6.88□□□□□ -1.31
RUNX1-217ENST00000494829 GJB2P29033 226 aa6.88□□□□□ -1.31
RUNX1-217ENST00000494829 IL6STP40189 918 aaPredicted RBP6.88□□□□□ -1.31
RUNX1-217ENST00000494829 PHKA1P46020 1223 aa6.88□□□□□ -1.31
RUNX1-217ENST00000494829 BCL2L12Q9HB09 334 aa6.88□□□□□ -1.31
RUNX1-217ENST00000494829 PIH1D3Q9NQM4 214 aaKnown RBP6.88□□□□□ -1.31
RUNX1-217ENST00000494829 BTAF1O14981 1849 aa6.88□□□□□ -1.31
RUNX1-217ENST00000494829 ARAP2Q8WZ64 1704 aa6.88□□□□□ -1.31
RUNX1-217ENST00000494829 SH3TC1Q8TE82 1336 aa6.88□□□□□ -1.31
RUNX1-217ENST00000494829 CAPN15O75808 1086 aa6.88□□□□□ -1.31
RUNX1-217ENST00000494829 KLHL40Q2TBA0 621 aa6.88□□□□□ -1.31
RUNX1-217ENST00000494829 MCMDC2Q4G0Z9 681 aa6.88□□□□□ -1.31
RUNX1-217ENST00000494829 RUFY2Q8WXA3 655 aa6.88□□□□□ -1.31
RUNX1-217ENST00000494829 TM6SF1Q9BZW5 370 aa6.88□□□□□ -1.31
RUNX1-217ENST00000494829 GPR108Q9NPR9 543 aa6.88□□□□□ -1.31
RUNX1-217ENST00000494829 INCENPQ9NQS7 918 aa6.88□□□□□ -1.31
RUNX1-217ENST00000494829 MTMR6Q9Y217 621 aa6.88□□□□□ -1.31
RUNX1-217ENST00000494829 DDX49Q9Y6V7 483 aaKnown RBP6.88□□□□□ -1.31
RUNX1-217ENST00000494829 NTSR2O95665 410 aa6.88□□□□□ -1.31
RUNX1-217ENST00000494829 IFIT5Q13325 482 aaKnown RBP6.88□□□□□ -1.31
RUNX1-217ENST00000494829 ZSCAN23Q3MJ62 389 aa6.88□□□□□ -1.31
RUNX1-217ENST00000494829 CDC37L1Q7L3B6 337 aa6.88□□□□□ -1.31
RUNX1-217ENST00000494829 CCDC87Q9NVE4 849 aa6.88□□□□□ -1.31
RUNX1-217ENST00000494829 CTDNEP1O95476 244 aa6.87□□□□□ -1.31
RUNX1-217ENST00000494829 MCM2P49736 904 aa6.87□□□□□ -1.31
RUNX1-217ENST00000494829 LDHAL6AQ6ZMR3 332 aa6.87□□□□□ -1.31
RUNX1-217ENST00000494829 USP48Q86UV5 1035 aa6.87□□□□□ -1.31
RUNX1-217ENST00000494829 TEX13AQ9BXU3 409 aaPredicted RBP6.87□□□□□ -1.31
RUNX1-217ENST00000494829 CYP46A1Q9Y6A2 500 aa6.87□□□□□ -1.31
RUNX1-217ENST00000494829 GOLGA6L3A6NEY3 463 aa6.87□□□□□ -1.31
RUNX1-217ENST00000494829 KCNJ4P48050 445 aa6.87□□□□□ -1.31
RUNX1-217ENST00000494829 HAND2P61296 217 aa6.87□□□□□ -1.31
RUNX1-217ENST00000494829 TSGA10IPQ3SY00 556 aa6.87□□□□□ -1.31
RUNX1-217ENST00000494829 BARGINQ6ZT62 677 aa6.87□□□□□ -1.31
RUNX1-217ENST00000494829 SGIP1Q9BQI5 828 aa6.87□□□□□ -1.31
RUNX1-217ENST00000494829 GRPEL1Q9HAV7 217 aa6.87□□□□□ -1.31
RUNX1-217ENST00000494829 RRAGDQ9NQL2 400 aaPredicted RBP6.87□□□□□ -1.31
RUNX1-217ENST00000494829 SRP68Q9UHB9 627 aaKnown RBP6.87□□□□□ -1.31
RUNX1-217ENST00000494829 WWC3Q9ULE0 1092 aa6.87□□□□□ -1.31
RUNX1-217ENST00000494829 COL1A1P02452 1464 aaPredicted RBP6.87□□□□□ -1.31
RUNX1-217ENST00000494829 FGFR2P21802 821 aa6.87□□□□□ -1.31
RUNX1-217ENST00000494829 Q6ZUG5 572 aa6.87□□□□□ -1.31
RUNX1-217ENST00000494829 RBSNQ9H1K0 784 aa6.87□□□□□ -1.31
RUNX1-217ENST00000494829 CEP126Q9P2H0 1117 aa6.87□□□□□ -1.31
RUNX1-217ENST00000494829 THSD7AQ9UPZ6 1657 aa6.86□□□□□ -1.31
RUNX1-217ENST00000494829 DOCK2Q92608 1830 aa6.86□□□□□ -1.31
RUNX1-217ENST00000494829 ERVV-1B6SEH8 477 aa6.86□□□□□ -1.31
RUNX1-217ENST00000494829 UBAP1LF5GYI3 381 aa6.86□□□□□ -1.31
RUNX1-217ENST00000494829 NCLP19338 710 aaKnown RBP6.86□□□□□ -1.31
RUNX1-217ENST00000494829 METTL24Q5JXM2 366 aa6.86□□□□□ -1.31
RUNX1-217ENST00000494829 FERMT3Q86UX7 667 aa6.86□□□□□ -1.31
RUNX1-217ENST00000494829 RAB11FIP4Q86YS3 637 aa6.86□□□□□ -1.31
RUNX1-217ENST00000494829 DDX11Q96FC9 970 aa6.86□□□□□ -1.31
RUNX1-217ENST00000494829 SENP2Q9HC62 589 aa6.86□□□□□ -1.31
RUNX1-217ENST00000494829 TAOK2Q9UL54 1235 aa6.86□□□□□ -1.31
RUNX1-217ENST00000494829 THRAP3Q9Y2W1 955 aaKnown RBP6.86□□□□□ -1.31
RUNX1-217ENST00000494829 ABCC12Q96J65 1359 aa6.86□□□□□ -1.31
RUNX1-217ENST00000494829 TNRC6CQ9HCJ0 1690 aaKnown RBP6.86□□□□□ -1.31
RUNX1-217ENST00000494829 RGL2O15211 777 aa6.86□□□□□ -1.31
RUNX1-217ENST00000494829 RNF113AO15541 343 aaKnown RBP6.86□□□□□ -1.31
RUNX1-217ENST00000494829 STX6O43752 255 aa6.86□□□□□ -1.31
RUNX1-217ENST00000494829 KLRK1P26718 216 aa6.86□□□□□ -1.31
RUNX1-217ENST00000494829 EVX2Q03828 476 aa6.86□□□□□ -1.31
RUNX1-217ENST00000494829 DNM1Q05193 864 aaKnown RBP6.86□□□□□ -1.31
RUNX1-217ENST00000494829 SCRN1Q12765 414 aa6.86□□□□□ -1.31
RUNX1-217ENST00000494829 ATP2B3Q16720 1220 aa6.86□□□□□ -1.31
RUNX1-217ENST00000494829 NCOA5Q9HCD5 579 aaKnown RBP6.86□□□□□ -1.31
RUNX1-217ENST00000494829 SBF2Q86WG5 1849 aa6.86□□□□□ -1.31
RUNX1-217ENST00000494829 RFX7Q2KHR2 1363 aa6.86□□□□□ -1.31
RUNX1-217ENST00000494829 E7EWF7 191 aa6.86□□□□□ -1.31
RUNX1-217ENST00000494829 PDE8AO60658 829 aa6.86□□□□□ -1.31
RUNX1-217ENST00000494829 PDE8BO95263 885 aa6.86□□□□□ -1.31
RUNX1-217ENST00000494829 ZSCAN22P10073 491 aaPredicted RBP6.86□□□□□ -1.31
RUNX1-217ENST00000494829 ERFEQ4G0M1 354 aa6.86□□□□□ -1.31
RUNX1-217ENST00000494829 CCDC102BQ68D86 513 aa6.86□□□□□ -1.31
RUNX1-217ENST00000494829 BLOC1S2Q6QNY1 142 aa6.86□□□□□ -1.31
RUNX1-217ENST00000494829 TAF1LQ8IZX4 1826 aa6.85□□□□□ -1.31
RUNX1-217ENST00000494829 C4AP0C0L4 1744 aa6.85□□□□□ -1.31
RUNX1-217ENST00000494829 TCRBV5S4A2TA0A5A2 114 aa6.85□□□□□ -1.31
RUNX1-217ENST00000494829 HIP1O00291 1037 aa6.85□□□□□ -1.31
RUNX1-217ENST00000494829 EIF5BO60841 1220 aaKnown RBP6.85□□□□□ -1.31
RUNX1-217ENST00000494829 F13A1P00488 732 aa6.85□□□□□ -1.31
RUNX1-217ENST00000494829 ANTXR2P58335 489 aa6.85□□□□□ -1.31
RUNX1-217ENST00000494829 EXOSC10Q01780 885 aaKnown RBP6.85□□□□□ -1.31
RUNX1-217ENST00000494829 APOBRQ0VD83 1088 aa6.85□□□□□ -1.31
RUNX1-217ENST00000494829 TTC39AQ5SRH9 613 aa6.85□□□□□ -1.31
RUNX1-217ENST00000494829 TBC1D9BQ66K14 1250 aa6.85□□□□□ -1.31
RUNX1-217ENST00000494829 NEK1Q96PY6 1258 aa6.85□□□□□ -1.31
RUNX1-217ENST00000494829 NIP7Q9Y221 180 aaKnown RBP eCLIP6.85□□□□□ -1.31
RUNX1-217ENST00000494829 SCN7AQ01118 1682 aa6.85□□□□□ -1.31
RUNX1-217ENST00000494829 C4BP0C0L5 1744 aa6.85□□□□□ -1.31
RUNX1-217ENST00000494829 SYCE3A1L190 88 aa6.85□□□□□ -1.31
RUNX1-217ENST00000494829 FGAP02671 866 aa6.85□□□□□ -1.31
RUNX1-217ENST00000494829 BCAMP50895 628 aa6.85□□□□□ -1.31
RUNX1-217ENST00000494829 FOSBP53539 338 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms