RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 SYMPKQ92797 1274 aaKnown RBP7.03□□□□□ -1.28
SPTLC3-205ENST00000476791 SMARCC1Q92922 1105 aaPredicted RBP7.03□□□□□ -1.28
SPTLC3-205ENST00000476791 KCNN1Q92952 543 aa7.03□□□□□ -1.28
SPTLC3-205ENST00000476791 NACC2Q96BF6 587 aa7.03□□□□□ -1.28
SPTLC3-205ENST00000476791 NAP1L4Q99733 375 aaKnown RBP7.03□□□□□ -1.28
SPTLC3-205ENST00000476791 PPCSQ9HAB8 311 aa7.03□□□□□ -1.28
SPTLC3-205ENST00000476791 BRD4O60885 1362 aaPredicted RBP7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 KRT38O76015 456 aa7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 NDUFV2P19404 249 aa7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 AMPD3Q01432 767 aa7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 ESCO1Q5FWF5 840 aa7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 MSL1Q68DK7 614 aa7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 LCA5Q86VQ0 697 aa7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 SNX32Q86XE0 403 aa7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 ANKLE1Q8NAG6 615 aa7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 FRS2Q8WU20 508 aa7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 SH3KBP1Q96B97 665 aa7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 IER2Q9BTL4 223 aa7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 IRX2Q9BZI1 471 aaPredicted RBP7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 VEZTQ9HBM0 779 aa7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 TMEM165Q9HC07 324 aa7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 PTPRHQ9HD43 1115 aa7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 ACAD8Q9UKU7 415 aa7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 ZNF652Q9Y2D9 606 aa7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 CC2D2AQ9P2K1 1620 aa7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 POM121CA8CG34 1229 aa7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 F8VZ95 297 aa7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 MAN1A1P33908 653 aa7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 TRDNQ13061 729 aa7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 ATP2B3Q16720 1220 aa7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 PLA2G2CQ5R387 149 aa7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 FKBP15Q5T1M5 1219 aa7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 FAAH2Q6GMR7 532 aa7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 RASGRP2Q7LDG7 609 aa7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 USP48Q86UV5 1035 aa7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 TBC1D31Q96DN5 1066 aa7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 BICD1Q96G01 975 aa7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 UNC45AQ9H3U1 944 aa7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 DCAF16Q9NXF7 216 aa7.02□□□□□ -1.29
SPTLC3-205ENST00000476791 GTF2F1P35269 517 aaKnown RBP eCLIP7.01□□□□□ -1.29
SPTLC3-205ENST00000476791 SAFB2Q14151 953 aaKnown RBP eCLIP7.01□□□□□ -1.29
SPTLC3-205ENST00000476791 MAPRE1Q15691 268 aaKnown RBP7.01□□□□□ -1.29
SPTLC3-205ENST00000476791 TSGA10IPQ3SY00 556 aa7.01□□□□□ -1.29
SPTLC3-205ENST00000476791 HPS3Q969F9 1004 aa7.01□□□□□ -1.29
SPTLC3-205ENST00000476791 EMID1Q96A84 441 aaPredicted RBP7.01□□□□□ -1.29
SPTLC3-205ENST00000476791 MAP3K14Q99558 947 aa7.01□□□□□ -1.29
SPTLC3-205ENST00000476791 ASAP1Q9ULH1 1129 aa7.01□□□□□ -1.29
SPTLC3-205ENST00000476791 USTQ9Y2C2 406 aa7.01□□□□□ -1.29
SPTLC3-205ENST00000476791 ZNF330Q9Y3S2 320 aaPredicted RBP7.01□□□□□ -1.29
SPTLC3-205ENST00000476791 LINC00854A0A1B0GVQ3 168 aa7.01□□□□□ -1.29
SPTLC3-205ENST00000476791 MOXD2PA6NHM9 499 aa7.01□□□□□ -1.29
SPTLC3-205ENST00000476791 FDX1P10109 184 aa7.01□□□□□ -1.29
SPTLC3-205ENST00000476791 ERCC5P28715 1186 aaPredicted RBP7.01□□□□□ -1.29
SPTLC3-205ENST00000476791 ADCY2Q08462 1091 aa7.01□□□□□ -1.29
SPTLC3-205ENST00000476791 CHAF1AQ13111 956 aaPredicted RBP7.01□□□□□ -1.29
SPTLC3-205ENST00000476791 SART3Q15020 963 aaKnown RBP7.01□□□□□ -1.29
SPTLC3-205ENST00000476791 RABL6Q3YEC7 729 aaPredicted RBP7.01□□□□□ -1.29
SPTLC3-205ENST00000476791 SFMBT2Q5VUG0 894 aa7.01□□□□□ -1.29
SPTLC3-205ENST00000476791 MCTP2Q6DN12 878 aa7.01□□□□□ -1.29
SPTLC3-205ENST00000476791 ZNF449Q6P9G9 518 aa7.01□□□□□ -1.29
SPTLC3-205ENST00000476791 WDR75Q8IWA0 830 aaKnown RBP7.01□□□□□ -1.29
SPTLC3-205ENST00000476791 CHPFQ8IZ52 775 aa7.01□□□□□ -1.29
SPTLC3-205ENST00000476791 LILRB2Q8N423 598 aa7.01□□□□□ -1.29
SPTLC3-205ENST00000476791 TRERF1Q96PN7 1200 aa7.01□□□□□ -1.29
SPTLC3-205ENST00000476791 USB1Q9BQ65 265 aaKnown RBP7.01□□□□□ -1.29
SPTLC3-205ENST00000476791 SLC39A3Q9BRY0 314 aa7.01□□□□□ -1.29
SPTLC3-205ENST00000476791 RPAP3Q9H6T3 665 aaPredicted RBP7.01□□□□□ -1.29
SPTLC3-205ENST00000476791 ZSWIM4Q9H7M6 989 aa7.01□□□□□ -1.29
SPTLC3-205ENST00000476791 FCF1Q9Y324 198 aaKnown RBP7.01□□□□□ -1.29
SPTLC3-205ENST00000476791 H0Y3Z8 333 aa7□□□□□ -1.29
SPTLC3-205ENST00000476791 DYNC1I1O14576 645 aa7□□□□□ -1.29
SPTLC3-205ENST00000476791 FOSP01100 380 aaPredicted RBP7□□□□□ -1.29
SPTLC3-205ENST00000476791 TSPY4P0CV99 314 aa7□□□□□ -1.29
SPTLC3-205ENST00000476791 TSPY10P0CW01 314 aa7□□□□□ -1.29
SPTLC3-205ENST00000476791 HSPA5P11021 654 aaKnown RBP7□□□□□ -1.29
SPTLC3-205ENST00000476791 IBSPP21815 317 aaPredicted RBP7□□□□□ -1.29
SPTLC3-205ENST00000476791 SLC19A1P41440 591 aa7□□□□□ -1.29
SPTLC3-205ENST00000476791 POU5F1BQ06416 359 aa7□□□□□ -1.29
SPTLC3-205ENST00000476791 TRIM29Q14134 588 aa7□□□□□ -1.29
SPTLC3-205ENST00000476791 SHROOM1Q2M3G4 852 aaPredicted RBP7□□□□□ -1.29
SPTLC3-205ENST00000476791 PAF1Q8N7H5 531 aa7□□□□□ -1.29
SPTLC3-205ENST00000476791 IPCEF1Q8WWN9 437 aaPredicted RBP7□□□□□ -1.29
SPTLC3-205ENST00000476791 ABCG4Q9H172 646 aa7□□□□□ -1.29
SPTLC3-205ENST00000476791 CALCOCO1Q9P1Z2 691 aa7□□□□□ -1.29
SPTLC3-205ENST00000476791 EVLQ9UI08 416 aaPredicted RBP7□□□□□ -1.29
SPTLC3-205ENST00000476791 PCDHGC3Q9UN70 934 aa7□□□□□ -1.29
SPTLC3-205ENST00000476791 TMEM98Q9Y2Y6 226 aa7□□□□□ -1.29
SPTLC3-205ENST00000476791 V9GY48 417 aaPredicted RBP7□□□□□ -1.29
SPTLC3-205ENST00000476791 TMEM238LA0A1B0GVL6 79 aa7□□□□□ -1.29
SPTLC3-205ENST00000476791 TNFRSF10BO14763 440 aa7□□□□□ -1.29
SPTLC3-205ENST00000476791 OFD1O75665 1012 aa7□□□□□ -1.29
SPTLC3-205ENST00000476791 INMTO95050 263 aa7□□□□□ -1.29
SPTLC3-205ENST00000476791 GNALP38405 381 aa7□□□□□ -1.29
SPTLC3-205ENST00000476791 ODR4Q5SWX8 454 aa7□□□□□ -1.29
SPTLC3-205ENST00000476791 NAIF1Q69YI7 327 aaPredicted RBP7□□□□□ -1.29
SPTLC3-205ENST00000476791 WWC2Q6AWC2 1192 aa7□□□□□ -1.29
SPTLC3-205ENST00000476791 PACS1Q6VY07 963 aa7□□□□□ -1.29
SPTLC3-205ENST00000476791 VPS52Q8N1B4 723 aa7□□□□□ -1.29
SPTLC3-205ENST00000476791 CCDC89Q8N998 374 aa7□□□□□ -1.29
SPTLC3-205ENST00000476791 RUNDC1Q96C34 613 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms