RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 FAM117BQ6P1L5 589 aa8.14□□□□□ -1.11
CNOT4-209ENST00000473470 DMRTC2Q8IXT2 367 aaPredicted RBP8.14□□□□□ -1.11
CNOT4-209ENST00000473470 FAM229AH3BQW9 127 aa8.13□□□□□ -1.11
CNOT4-209ENST00000473470 MSTNO14793 375 aa8.13□□□□□ -1.11
CNOT4-209ENST00000473470 ZSCAN29Q8IWY8 852 aaPredicted RBP8.13□□□□□ -1.11
CNOT4-209ENST00000473470 IL22RA1Q8N6P7 574 aa8.13□□□□□ -1.11
CNOT4-209ENST00000473470 TMEM102Q8N9M5 508 aaPredicted RBP8.13□□□□□ -1.11
CNOT4-209ENST00000473470 ZFYVE28Q9HCC9 887 aa8.13□□□□□ -1.11
CNOT4-209ENST00000473470 DZANK1Q9NVP4 752 aa8.13□□□□□ -1.11
CNOT4-209ENST00000473470 PPME1Q9Y570 386 aa8.13□□□□□ -1.11
CNOT4-209ENST00000473470 PDE2AO00408 941 aaPredicted RBP8.12□□□□□ -1.11
CNOT4-209ENST00000473470 ILDR2Q71H61 639 aa8.12□□□□□ -1.11
CNOT4-209ENST00000473470 FBXO11Q86XK2 927 aa8.12□□□□□ -1.11
CNOT4-209ENST00000473470 H3BRJ5 948 aa8.11□□□□□ -1.11
CNOT4-209ENST00000473470 EIF4EBP3O60516 100 aaPredicted RBP8.11□□□□□ -1.11
CNOT4-209ENST00000473470 CHRNA4P43681 627 aa8.11□□□□□ -1.11
CNOT4-209ENST00000473470 BAG6P46379 1132 aa8.11□□□□□ -1.11
CNOT4-209ENST00000473470 GALNT12Q8IXK2 581 aa8.11□□□□□ -1.11
CNOT4-209ENST00000473470 WNT8BQ93098 351 aa8.11□□□□□ -1.11
CNOT4-209ENST00000473470 OSMRQ99650 979 aa8.11□□□□□ -1.11
CNOT4-209ENST00000473470 ZKSCAN3Q9BRR0 538 aa8.11□□□□□ -1.11
CNOT4-209ENST00000473470 BHLHE41Q9C0J9 482 aaPredicted RBP8.11□□□□□ -1.11
CNOT4-209ENST00000473470 LACRTQ9GZZ8 138 aa8.11□□□□□ -1.11
CNOT4-209ENST00000473470 ADAM19Q9H013 955 aa8.11□□□□□ -1.11
CNOT4-209ENST00000473470 TMC7Q7Z402 723 aa8.1□□□□□ -1.11
CNOT4-209ENST00000473470 CD163Q86VB7 1156 aa8.1□□□□□ -1.11
CNOT4-209ENST00000473470 AEBP1Q8IUX7 1158 aa8.1□□□□□ -1.11
CNOT4-209ENST00000473470 SPOCK3Q9BQ16 436 aa8.1□□□□□ -1.11
CNOT4-209ENST00000473470 NISCHQ9Y2I1 1504 aa8.09□□□□□ -1.11
CNOT4-209ENST00000473470 C1QTNF9BB2RNN3 333 aa8.09□□□□□ -1.11
CNOT4-209ENST00000473470 IGHA2P01877 340 aa8.09□□□□□ -1.11
CNOT4-209ENST00000473470 PIP4K2BP78356 416 aa8.09□□□□□ -1.11
CNOT4-209ENST00000473470 SND1Q7KZF4 910 aaKnown RBP eCLIP8.09□□□□□ -1.11
CNOT4-209ENST00000473470 KLHL23Q8NBE8 558 aa8.09□□□□□ -1.11
CNOT4-209ENST00000473470 LENG1Q96BZ8 264 aaPredicted RBP8.09□□□□□ -1.11
CNOT4-209ENST00000473470 NFKBIEO00221 500 aa8.08□□□□□ -1.12
CNOT4-209ENST00000473470 EIF1AYO14602 144 aaKnown RBP8.08□□□□□ -1.12
CNOT4-209ENST00000473470 PROCP04070 461 aa8.08□□□□□ -1.12
CNOT4-209ENST00000473470 ACPPP15309 386 aa8.08□□□□□ -1.12
CNOT4-209ENST00000473470 GATA4P43694 442 aa8.08□□□□□ -1.12
CNOT4-209ENST00000473470 ORC1Q13415 861 aa8.08□□□□□ -1.12
CNOT4-209ENST00000473470 IGF2-ASQ6U949 168 aa8.08□□□□□ -1.12
CNOT4-209ENST00000473470 BSNDQ8WZ55 320 aa8.08□□□□□ -1.12
CNOT4-209ENST00000473470 ASB16Q96NS5 453 aa8.08□□□□□ -1.12
CNOT4-209ENST00000473470 CSRNP1Q96S65 589 aa8.08□□□□□ -1.12
CNOT4-209ENST00000473470 POP1Q99575 1024 aaKnown RBP8.08□□□□□ -1.12
CNOT4-209ENST00000473470 MRPL18Q9H0U6 180 aaKnown RBP8.08□□□□□ -1.12
CNOT4-209ENST00000473470 USP21Q9UK80 565 aa8.08□□□□□ -1.12
CNOT4-209ENST00000473470 TREHO43280 583 aa8.07□□□□□ -1.12
CNOT4-209ENST00000473470 DEAF1O75398 565 aaPredicted RBP8.07□□□□□ -1.12
CNOT4-209ENST00000473470 ITGB2P05107 769 aa8.07□□□□□ -1.12
CNOT4-209ENST00000473470 EPHA1P21709 976 aa8.07□□□□□ -1.12
CNOT4-209ENST00000473470 ADGRE1Q14246 886 aa8.07□□□□□ -1.12
CNOT4-209ENST00000473470 MBTPS1Q14703 1052 aa8.07□□□□□ -1.12
CNOT4-209ENST00000473470 GRIK4Q16099 956 aa8.07□□□□□ -1.12
CNOT4-209ENST00000473470 PEAR1Q5VY43 1037 aaPredicted RBP8.07□□□□□ -1.12
CNOT4-209ENST00000473470 TXNRD3Q86VQ6 643 aa8.07□□□□□ -1.12
CNOT4-209ENST00000473470 NIF3L1Q9GZT8 377 aa8.07□□□□□ -1.12
CNOT4-209ENST00000473470 NPHS2Q9NP85 383 aa8.07□□□□□ -1.12
CNOT4-209ENST00000473470 OSGEPQ9NPF4 335 aa8.07□□□□□ -1.12
CNOT4-209ENST00000473470 SOX13Q9UN79 622 aa8.07□□□□□ -1.12
CNOT4-209ENST00000473470 DLL1O00548 723 aa8.06□□□□□ -1.12
CNOT4-209ENST00000473470 SELPP16109 830 aa8.06□□□□□ -1.12
CNOT4-209ENST00000473470 ARL4DP49703 201 aa8.06□□□□□ -1.12
CNOT4-209ENST00000473470 SETDB1Q15047 1291 aa8.06□□□□□ -1.12
CNOT4-209ENST00000473470 FBF1Q8TES7 1133 aa8.06□□□□□ -1.12
CNOT4-209ENST00000473470 LIN7BQ9HAP6 207 aa8.06□□□□□ -1.12
CNOT4-209ENST00000473470 SEC31BQ9NQW1 1179 aa8.06□□□□□ -1.12
CNOT4-209ENST00000473470 TRAK1Q9UPV9 953 aa8.06□□□□□ -1.12
CNOT4-209ENST00000473470 LINC01387J3KSC0 135 aa8.05□□□□□ -1.12
CNOT4-209ENST00000473470 ATP2B2Q01814 1243 aa8.05□□□□□ -1.12
CNOT4-209ENST00000473470 FMR1Q06787 632 aaKnown RBP eCLIP8.05□□□□□ -1.12
CNOT4-209ENST00000473470 KIAA0319Q5VV43 1072 aa8.05□□□□□ -1.12
CNOT4-209ENST00000473470 CCNJLQ8IV13 435 aa8.05□□□□□ -1.12
CNOT4-209ENST00000473470 ASAP3Q8TDY4 903 aa8.05□□□□□ -1.12
CNOT4-209ENST00000473470 NXPE3Q969Y0 559 aa8.05□□□□□ -1.12
CNOT4-209ENST00000473470 LATS2Q9NRM7 1088 aa8.05□□□□□ -1.12
CNOT4-209ENST00000473470 A0A1W2PP55 124 aa8.04□□□□□ -1.12
CNOT4-209ENST00000473470 FSCN2O14926 492 aa8.04□□□□□ -1.12
CNOT4-209ENST00000473470 POLR3DP05423 398 aaPredicted RBP8.04□□□□□ -1.12
CNOT4-209ENST00000473470 PRPF40BQ6NWY9 871 aaKnown RBP8.04□□□□□ -1.12
CNOT4-209ENST00000473470 CCDC74AQ96AQ1 378 aa8.04□□□□□ -1.12
CNOT4-209ENST00000473470 HHIPQ96QV1 700 aa8.04□□□□□ -1.12
CNOT4-209ENST00000473470 EHD4Q9H223 541 aa8.04□□□□□ -1.12
CNOT4-209ENST00000473470 SOX17Q9H6I2 414 aaPredicted RBP8.04□□□□□ -1.12
CNOT4-209ENST00000473470 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.04□□□□□ -1.12
CNOT4-209ENST00000473470 PNMA6FA0A0J9YX94 578 aa8.03□□□□□ -1.12
CNOT4-209ENST00000473470 CD68P34810 354 aaPredicted RBP8.03□□□□□ -1.12
CNOT4-209ENST00000473470 FGD1P98174 961 aa8.03□□□□□ -1.12
CNOT4-209ENST00000473470 IKBKEQ14164 716 aa8.03□□□□□ -1.12
CNOT4-209ENST00000473470 DSC3Q14574 896 aa8.03□□□□□ -1.12
CNOT4-209ENST00000473470 ENOX2Q16206 610 aaKnown RBP8.03□□□□□ -1.12
CNOT4-209ENST00000473470 USPL1Q5W0Q7 1092 aa8.03□□□□□ -1.12
CNOT4-209ENST00000473470 TXNDC11Q6PKC3 985 aa8.03□□□□□ -1.12
CNOT4-209ENST00000473470 SHISA2Q6UWI4 295 aa8.03□□□□□ -1.12
CNOT4-209ENST00000473470 NLRP2Q9NX02 1062 aa8.03□□□□□ -1.12
CNOT4-209ENST00000473470 GADD45BO75293 160 aaPredicted RBP8.02□□□□□ -1.13
CNOT4-209ENST00000473470 PTPN12Q05209 780 aaKnown RBP8.02□□□□□ -1.13
CNOT4-209ENST00000473470 CLEC4MQ9H2X3 399 aaPredicted RBP8.02□□□□□ -1.13
CNOT4-209ENST00000473470 SH2B1Q9NRF2 756 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms