RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 BRD4O60885 1362 aaPredicted RBP8.68□□□□□ -1.02
NCL-208ENST00000466274 KIF1BO60333 1816 aa8.67□□□□□ -1.02
NCL-208ENST00000466274 PIK3C2GO75747 1445 aa8.67□□□□□ -1.02
NCL-208ENST00000466274 COL5A2P05997 1499 aaPredicted RBP8.67□□□□□ -1.02
NCL-208ENST00000466274 THBS1P07996 1170 aa8.67□□□□□ -1.02
NCL-208ENST00000466274 FSTL1Q12841 308 aa8.67□□□□□ -1.02
NCL-208ENST00000466274 PHTF2Q8N3S3 785 aa8.67□□□□□ -1.02
NCL-208ENST00000466274 ZSCAN10Q96SZ4 725 aaPredicted RBP8.67□□□□□ -1.02
NCL-208ENST00000466274 ENAMQ9NRM1 1142 aa8.67□□□□□ -1.02
NCL-208ENST00000466274 ALS2Q96Q42 1657 aa8.66□□□□□ -1.02
NCL-208ENST00000466274 GOLGB1Q14789 3259 aaKnown RBP8.66□□□□□ -1.02
NCL-208ENST00000466274 CNTNAP5Q8WYK1 1306 aa8.66□□□□□ -1.02
NCL-208ENST00000466274 PRR36Q9H6K5 1346 aa8.66□□□□□ -1.02
NCL-208ENST00000466274 ZBTB7CA1YPR0 619 aa8.66□□□□□ -1.02
NCL-208ENST00000466274 BCRP11274 1271 aa8.66□□□□□ -1.02
NCL-208ENST00000466274 MX2P20592 715 aa8.66□□□□□ -1.02
NCL-208ENST00000466274 HMGB2P26583 209 aaKnown RBP8.66□□□□□ -1.02
NCL-208ENST00000466274 EIF4G2P78344 907 aaKnown RBP eCLIP8.66□□□□□ -1.02
NCL-208ENST00000466274 GPAT2Q6NUI2 795 aa8.66□□□□□ -1.02
NCL-208ENST00000466274 KANK3Q6NY19 840 aa8.66□□□□□ -1.02
NCL-208ENST00000466274 TRPM3Q9HCF6 1732 aaPredicted RBP8.66□□□□□ -1.02
NCL-208ENST00000466274 USP19O94966 1318 aa8.65□□□□□ -1.02
NCL-208ENST00000466274 PNPLA7Q6ZV29 1317 aa8.65□□□□□ -1.02
NCL-208ENST00000466274 HSPA1AP0DMV8 641 aaKnown RBP8.65□□□□□ -1.02
NCL-208ENST00000466274 HSPA1BP0DMV9 641 aaKnown RBP8.65□□□□□ -1.02
NCL-208ENST00000466274 CSB-PGBD3P0DP91 1061 aa8.65□□□□□ -1.02
NCL-208ENST00000466274 CFAP70Q5T0N1 1121 aa8.65□□□□□ -1.02
NCL-208ENST00000466274 TMEM214Q6NUQ4 689 aaKnown RBP8.65□□□□□ -1.02
NCL-208ENST00000466274 NUDT16Q96DE0 195 aaKnown RBP8.65□□□□□ -1.02
NCL-208ENST00000466274 ACSBG1Q96GR2 724 aa8.65□□□□□ -1.02
NCL-208ENST00000466274 DOLKQ9UPQ8 538 aa8.65□□□□□ -1.02
NCL-208ENST00000466274 DNMT3AQ9Y6K1 912 aaPredicted RBP8.65□□□□□ -1.02
NCL-208ENST00000466274 KNDC1Q76NI1 1749 aa8.65□□□□□ -1.03
NCL-208ENST00000466274 PARP4Q9UKK3 1724 aaKnown RBP8.65□□□□□ -1.03
NCL-208ENST00000466274 WDR17Q8IZU2 1322 aa8.64□□□□□ -1.03
NCL-208ENST00000466274 PEAK1Q9H792 1746 aa8.64□□□□□ -1.03
NCL-208ENST00000466274 VAC14Q08AM6 782 aa8.64□□□□□ -1.03
NCL-208ENST00000466274 USP4Q13107 963 aa8.64□□□□□ -1.03
NCL-208ENST00000466274 SLFNL1Q499Z3 407 aa8.64□□□□□ -1.03
NCL-208ENST00000466274 C4orf17Q53FE4 359 aa8.64□□□□□ -1.03
NCL-208ENST00000466274 RNF135Q8IUD6 432 aa8.64□□□□□ -1.03
NCL-208ENST00000466274 NEDD1Q8NHV4 660 aa8.64□□□□□ -1.03
NCL-208ENST00000466274 CARD10Q9BWT7 1032 aa8.64□□□□□ -1.03
NCL-208ENST00000466274 PRM3Q9NNZ6 103 aa8.64□□□□□ -1.03
NCL-208ENST00000466274 LRRC4BQ9NT99 713 aa8.64□□□□□ -1.03
NCL-208ENST00000466274 TULP4Q9NRJ4 1543 aa8.64□□□□□ -1.03
NCL-208ENST00000466274 LOC100996750A0A140TA64 210 aa8.63□□□□□ -1.03
NCL-208ENST00000466274 OXLD1Q5BKU9 147 aa8.63□□□□□ -1.03
NCL-208ENST00000466274 GNASQ5JWF2 1037 aa8.63□□□□□ -1.03
NCL-208ENST00000466274 KRTAP4-6Q9BYQ5 205 aa8.63□□□□□ -1.03
NCL-208ENST00000466274 ETNK1Q9HBU6 452 aa8.63□□□□□ -1.03
NCL-208ENST00000466274 GDPD2Q9HCC8 539 aa8.63□□□□□ -1.03
NCL-208ENST00000466274 TRAK1Q9UPV9 953 aa8.63□□□□□ -1.03
NCL-208ENST00000466274 ACEP12821 1306 aa8.62□□□□□ -1.03
NCL-208ENST00000466274 A0A1B0GTH6 734 aa8.62□□□□□ -1.03
NCL-208ENST00000466274 GTF2E1P29083 439 aaPredicted RBP8.62□□□□□ -1.03
NCL-208ENST00000466274 HTRA3P83110 453 aa8.62□□□□□ -1.03
NCL-208ENST00000466274 CFHR5Q9BXR6 569 aa8.62□□□□□ -1.03
NCL-208ENST00000466274 RUBCNLQ9H714 662 aa8.62□□□□□ -1.03
NCL-208ENST00000466274 NSFL1CQ9UNZ2 370 aaKnown RBP8.62□□□□□ -1.03
NCL-208ENST00000466274 IFT172Q9UG01 1749 aa8.62□□□□□ -1.03
NCL-208ENST00000466274 USP6P35125 1406 aa8.62□□□□□ -1.03
NCL-208ENST00000466274 PPLO60437 1756 aa8.61□□□□□ -1.03
NCL-208ENST00000466274 MSX1P28360 303 aa8.61□□□□□ -1.03
NCL-208ENST00000466274 ABL2P42684 1182 aa8.61□□□□□ -1.03
NCL-208ENST00000466274 POLR3AO14802 1390 aaPredicted RBP8.61□□□□□ -1.03
NCL-208ENST00000466274 CCDC7Q96M83 1385 aa8.61□□□□□ -1.03
NCL-208ENST00000466274 UBAP2LQ14157 1087 aaKnown RBP8.6□□□□□ -1.03
NCL-208ENST00000466274 BEND7Q8N7W2 519 aaPredicted RBP8.6□□□□□ -1.03
NCL-208ENST00000466274 FLAD1Q8NFF5 587 aa8.6□□□□□ -1.03
NCL-208ENST00000466274 OXCT2Q9BYC2 517 aaPredicted RBP8.6□□□□□ -1.03
NCL-208ENST00000466274 SPATA31E1Q6ZUB1 1445 aa8.6□□□□□ -1.03
NCL-208ENST00000466274 IGSF1Q8N6C5 1336 aa8.59□□□□□ -1.03
NCL-208ENST00000466274 LOC105371045A0A1W2PR82 267 aa8.59□□□□□ -1.03
NCL-208ENST00000466274 OIP5O43482 229 aa8.59□□□□□ -1.03
NCL-208ENST00000466274 TLR1Q15399 786 aa8.59□□□□□ -1.03
NCL-208ENST00000466274 MSL1Q68DK7 614 aa8.59□□□□□ -1.03
NCL-208ENST00000466274 PPARGC1BQ86YN6 1023 aaKnown RBP8.59□□□□□ -1.03
NCL-208ENST00000466274 SMC1BQ8NDV3 1235 aa8.59□□□□□ -1.03
NCL-208ENST00000466274 NMRK2Q9NPI5 230 aa8.59□□□□□ -1.03
NCL-208ENST00000466274 LMO7Q8WWI1 1683 aa8.59□□□□□ -1.03
NCL-208ENST00000466274 RGPD8O14715 1765 aaPredicted RBP8.58□□□□□ -1.04
NCL-208ENST00000466274 LRRC37A3O60309 1634 aa8.58□□□□□ -1.04
NCL-208ENST00000466274 KDM2BQ8NHM5 1336 aa8.58□□□□□ -1.04
NCL-208ENST00000466274 CRYBG1Q9Y4K1 1723 aa8.58□□□□□ -1.04
NCL-208ENST00000466274 PHF20L1A8MW92 1017 aa8.58□□□□□ -1.04
NCL-208ENST00000466274 MAP2K3P46734 347 aa8.58□□□□□ -1.04
NCL-208ENST00000466274 COL23A1Q86Y22 540 aaPredicted RBP8.58□□□□□ -1.04
NCL-208ENST00000466274 PGBD3Q8N328 593 aa8.58□□□□□ -1.04
NCL-208ENST00000466274 KCNH5Q8NCM2 988 aa8.58□□□□□ -1.04
NCL-208ENST00000466274 CDK19Q9BWU1 502 aa8.58□□□□□ -1.04
NCL-208ENST00000466274 PHRF1Q9P1Y6 1649 aaKnown RBP8.58□□□□□ -1.04
NCL-208ENST00000466274 TNS2Q63HR2 1409 aa8.57□□□□□ -1.04
NCL-208ENST00000466274 TOPAZ1Q8N9V7 1692 aa8.57□□□□□ -1.04
NCL-208ENST00000466274 IGHA1P01876 353 aa8.57□□□□□ -1.04
NCL-208ENST00000466274 SCNN1DP51172 638 aa8.57□□□□□ -1.04
NCL-208ENST00000466274 C1orf229Q6ZS94 237 aaPredicted RBP8.57□□□□□ -1.04
NCL-208ENST00000466274 PODNQ7Z5L7 613 aa8.57□□□□□ -1.04
NCL-208ENST00000466274 RHBDD1Q8TEB9 315 aa8.57□□□□□ -1.04
NCL-208ENST00000466274 DCAF5Q96JK2 942 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms