RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 PGBD1Q96JS3 809 aa19.25■□□□□ 0.67
SLX4-202ENST00000466154 SH3TC1Q8TE82 1336 aa19.25■□□□□ 0.67
SLX4-202ENST00000466154 IDH1O75874 414 aaKnown RBP19.25■□□□□ 0.67
SLX4-202ENST00000466154 CARD10Q9BWT7 1032 aa19.25■□□□□ 0.67
SLX4-202ENST00000466154 SASS6Q6UVJ0 657 aa19.25■□□□□ 0.67
SLX4-202ENST00000466154 NSUN7Q8NE18 718 aaKnown RBP19.24■□□□□ 0.67
SLX4-202ENST00000466154 DNAJC25Q9H1X3 360 aa19.24■□□□□ 0.67
SLX4-202ENST00000466154 GREM2Q9H772 168 aa19.24■□□□□ 0.67
SLX4-202ENST00000466154 TRMT112Q9UI30 125 aaKnown RBP19.24■□□□□ 0.67
SLX4-202ENST00000466154 CPDO75976 1380 aa19.24■□□□□ 0.67
SLX4-202ENST00000466154 STARD3NLO95772 234 aa19.23■□□□□ 0.67
SLX4-202ENST00000466154 PUS7LQ9H0K6 701 aaKnown RBP19.23■□□□□ 0.67
SLX4-202ENST00000466154 POLR3DP05423 398 aaPredicted RBP19.23■□□□□ 0.67
SLX4-202ENST00000466154 HMGB1P09429 215 aaKnown RBP19.23■□□□□ 0.67
SLX4-202ENST00000466154 ITGA6P23229 1130 aa19.23■□□□□ 0.67
SLX4-202ENST00000466154 ME1P48163 572 aa19.23■□□□□ 0.67
SLX4-202ENST00000466154 RESTQ13127 1097 aa19.23■□□□□ 0.67
SLX4-202ENST00000466154 GLIPR1L2Q4G1C9 344 aa19.23■□□□□ 0.67
SLX4-202ENST00000466154 FUCA2Q9BTY2 467 aa19.23■□□□□ 0.67
SLX4-202ENST00000466154 GJB4Q9NTQ9 266 aa19.23■□□□□ 0.67
SLX4-202ENST00000466154 TPM2P07951 284 aa19.23■□□□□ 0.67
SLX4-202ENST00000466154 DSCC1Q9BVC3 393 aa19.23■□□□□ 0.67
SLX4-202ENST00000466154 MRVI1Q9Y6F6 885 aa19.23■□□□□ 0.67
SLX4-202ENST00000466154 SNAP23O00161 211 aa19.22■□□□□ 0.67
SLX4-202ENST00000466154 RXRAP19793 462 aa19.22■□□□□ 0.67
SLX4-202ENST00000466154 ATP2B3Q16720 1220 aa19.22■□□□□ 0.67
SLX4-202ENST00000466154 CTDNEP1O95476 244 aa19.22■□□□□ 0.67
SLX4-202ENST00000466154 IMMTQ16891 758 aaKnown RBP19.22■□□□□ 0.67
SLX4-202ENST00000466154 TRIM5Q9C035 493 aa19.22■□□□□ 0.67
SLX4-202ENST00000466154 AKAP2Q9Y2D5 859 aa19.22■□□□□ 0.67
SLX4-202ENST00000466154 ARFGEF2Q9Y6D5 1785 aa19.21■□□□□ 0.67
SLX4-202ENST00000466154 PFKFB2O60825 505 aa19.21■□□□□ 0.67
SLX4-202ENST00000466154 RALYLQ86SE5 291 aaKnown RBP19.21■□□□□ 0.67
SLX4-202ENST00000466154 FGAP02671 866 aa19.21■□□□□ 0.67
SLX4-202ENST00000466154 CCDC144CPQ8IYA2 1237 aa19.21■□□□□ 0.67
SLX4-202ENST00000466154 FAM200AQ8TCP9 573 aa19.21■□□□□ 0.67
SLX4-202ENST00000466154 CFAP45Q9UL16 551 aa19.21■□□□□ 0.67
SLX4-202ENST00000466154 CPLX1O14810 134 aa19.21■□□□□ 0.67
SLX4-202ENST00000466154 PDIA3P30101 505 aaKnown RBP19.21■□□□□ 0.67
SLX4-202ENST00000466154 ISCA1Q9BUE6 129 aa19.21■□□□□ 0.67
SLX4-202ENST00000466154 STRCP1A6NGW2 1772 aa19.2■□□□□ 0.66
SLX4-202ENST00000466154 COL18A1P39060 1754 aa19.2■□□□□ 0.66
SLX4-202ENST00000466154 KLF18A0A0U1RQI7 1052 aa19.2■□□□□ 0.66
SLX4-202ENST00000466154 GOLGA8BA8MQT2 603 aa19.2■□□□□ 0.66
SLX4-202ENST00000466154 MCM5P33992 734 aa19.2■□□□□ 0.66
SLX4-202ENST00000466154 CCAR1Q8IX12 1150 aaKnown RBP19.2■□□□□ 0.66
SLX4-202ENST00000466154 USP28Q96RU2 1077 aa19.2■□□□□ 0.66
SLX4-202ENST00000466154 CBX8Q9HC52 389 aa19.2■□□□□ 0.66
SLX4-202ENST00000466154 ATG3Q9NT62 314 aa19.2■□□□□ 0.66
SLX4-202ENST00000466154 ADAMTS7Q9UKP4 1686 aa19.2■□□□□ 0.66
SLX4-202ENST00000466154 COL5A2P05997 1499 aaPredicted RBP19.2■□□□□ 0.66
SLX4-202ENST00000466154 SLC9C2Q5TAH2 1124 aa19.2■□□□□ 0.66
SLX4-202ENST00000466154 ALDH8A1Q9H2A2 487 aaPredicted RBP19.2■□□□□ 0.66
SLX4-202ENST00000466154 DENND2AQ9ULE3 1009 aa19.2■□□□□ 0.66
SLX4-202ENST00000466154 ZBTB1Q9Y2K1 713 aa19.2■□□□□ 0.66
SLX4-202ENST00000466154 PRC1O43663 620 aa19.19■□□□□ 0.66
SLX4-202ENST00000466154 BCL11BQ9C0K0 894 aaPredicted RBP19.19■□□□□ 0.66
SLX4-202ENST00000466154 PALLDQ8WX93 1383 aa19.19■□□□□ 0.66
SLX4-202ENST00000466154 JCADQ9P266 1359 aa19.19■□□□□ 0.66
SLX4-202ENST00000466154 NOLC1Q14978 699 aaKnown RBP eCLIP19.19■□□□□ 0.66
SLX4-202ENST00000466154 SF3A1Q15459 793 aaKnown RBP19.19■□□□□ 0.66
SLX4-202ENST00000466154 TSC1Q92574 1164 aa19.19■□□□□ 0.66
SLX4-202ENST00000466154 GPR108Q9NPR9 543 aa19.19■□□□□ 0.66
SLX4-202ENST00000466154 DDX19AQ9NUU7 478 aaKnown RBP19.19■□□□□ 0.66
SLX4-202ENST00000466154 MRC1P22897 1456 aa19.19■□□□□ 0.66
SLX4-202ENST00000466154 IRS4O14654 1257 aaPredicted RBP19.19■□□□□ 0.66
SLX4-202ENST00000466154 GPAA1O43292 621 aa19.19■□□□□ 0.66
SLX4-202ENST00000466154 ZNF165P49910 485 aa19.19■□□□□ 0.66
SLX4-202ENST00000466154 ZBTB38Q8NAP3 1195 aaPredicted RBP19.19■□□□□ 0.66
SLX4-202ENST00000466154 KIF3AQ9Y496 699 aa19.19■□□□□ 0.66
SLX4-202ENST00000466154 ELP1O95163 1332 aa19.19■□□□□ 0.66
SLX4-202ENST00000466154 DCCP43146 1447 aa19.18■□□□□ 0.66
SLX4-202ENST00000466154 ZNF213O14771 459 aa19.18■□□□□ 0.66
SLX4-202ENST00000466154 ZSCAN16Q9H4T2 348 aaPredicted RBP19.18■□□□□ 0.66
SLX4-202ENST00000466154 CIAO1O76071 339 aa19.18■□□□□ 0.66
SLX4-202ENST00000466154 PTGS1P23219 599 aa19.18■□□□□ 0.66
SLX4-202ENST00000466154 CLSTN2Q9H4D0 955 aa19.18■□□□□ 0.66
SLX4-202ENST00000466154 EXOSC10Q01780 885 aaKnown RBP19.17■□□□□ 0.66
SLX4-202ENST00000466154 CCDC73Q6ZRK6 1079 aa19.17■□□□□ 0.66
SLX4-202ENST00000466154 TOMM22Q9NS69 142 aa19.17■□□□□ 0.66
SLX4-202ENST00000466154 ANKRD18BA2A2Z9 1011 aa19.17■□□□□ 0.66
SLX4-202ENST00000466154 PCCAP05165 728 aaPredicted RBP19.17■□□□□ 0.66
SLX4-202ENST00000466154 MCAMP43121 646 aa19.17■□□□□ 0.66
SLX4-202ENST00000466154 HMGN5P82970 282 aaKnown RBP19.17■□□□□ 0.66
SLX4-202ENST00000466154 ACSBG1Q96GR2 724 aa19.17■□□□□ 0.66
SLX4-202ENST00000466154 PDIA4P13667 645 aaKnown RBP19.17■□□□□ 0.66
SLX4-202ENST00000466154 NKX1-1Q15270 411 aaPredicted RBP19.17■□□□□ 0.66
SLX4-202ENST00000466154 LRRFIP1Q32MZ4 808 aaKnown RBP19.17■□□□□ 0.66
SLX4-202ENST00000466154 NRBP1Q9UHY1 535 aa19.16■□□□□ 0.66
SLX4-202ENST00000466154 CTNNA3Q9UI47 895 aa19.16■□□□□ 0.66
SLX4-202ENST00000466154 PYCARDQ9ULZ3 195 aa19.16■□□□□ 0.66
SLX4-202ENST00000466154 NLRP10Q86W26 655 aa19.16■□□□□ 0.66
SLX4-202ENST00000466154 INCENPQ9NQS7 918 aa19.16■□□□□ 0.66
SLX4-202ENST00000466154 SOS2Q07890 1332 aaPredicted RBP19.15■□□□□ 0.66
SLX4-202ENST00000466154 TRDNQ13061 729 aa19.15■□□□□ 0.66
SLX4-202ENST00000466154 GIGYF2Q6Y7W6 1299 aaKnown RBP19.15■□□□□ 0.66
SLX4-202ENST00000466154 FSIP1Q8NA03 581 aa19.15■□□□□ 0.66
SLX4-202ENST00000466154 TTLL11Q8NHH1 800 aa19.15■□□□□ 0.66
SLX4-202ENST00000466154 SMARCC2Q8TAQ2 1214 aa19.15■□□□□ 0.66
SLX4-202ENST00000466154 ORC3Q9UBD5 711 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms