RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 TTC39AQ5SRH9 613 aa17.47■□□□□ 0.39
COL5A1-205ENST00000464187 DNAJC2Q99543 621 aaKnown RBP17.47■□□□□ 0.39
COL5A1-205ENST00000464187 NDUFB9Q9Y6M9 179 aa17.47■□□□□ 0.39
COL5A1-205ENST00000464187 IFIT1P09914 478 aaKnown RBP17.47■□□□□ 0.39
COL5A1-205ENST00000464187 SLC5A1P13866 664 aa17.47■□□□□ 0.39
COL5A1-205ENST00000464187 HSPA4P34932 840 aa17.47■□□□□ 0.39
COL5A1-205ENST00000464187 CLEC17AQ6ZS10 378 aa17.47■□□□□ 0.39
COL5A1-205ENST00000464187 EDC3Q96F86 508 aaKnown RBP17.47■□□□□ 0.39
COL5A1-205ENST00000464187 LSG1Q9H089 658 aaKnown RBP17.47■□□□□ 0.39
COL5A1-205ENST00000464187 TAF1P21675 1872 aa17.46■□□□□ 0.39
COL5A1-205ENST00000464187 CYP2E1P05181 493 aaPredicted RBP17.46■□□□□ 0.39
COL5A1-205ENST00000464187 QSER1Q2KHR3 1735 aa17.46■□□□□ 0.39
COL5A1-205ENST00000464187 ZGPATQ8N5A5 531 aaKnown RBP17.46■□□□□ 0.39
COL5A1-205ENST00000464187 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.46■□□□□ 0.39
COL5A1-205ENST00000464187 NRXN2Q9P2S2 1712 aa17.45■□□□□ 0.38
COL5A1-205ENST00000464187 MCM2P49736 904 aa17.45■□□□□ 0.38
COL5A1-205ENST00000464187 RBM17Q96I25 401 aaKnown RBP17.45■□□□□ 0.38
COL5A1-205ENST00000464187 CWC22Q9HCG8 908 aaKnown RBP17.45■□□□□ 0.38
COL5A1-205ENST00000464187 SPEF2Q9C093 1822 aa17.45■□□□□ 0.38
COL5A1-205ENST00000464187 HOXA10P31260 410 aaPredicted RBP17.44■□□□□ 0.38
COL5A1-205ENST00000464187 NUCB2P80303 420 aa17.44■□□□□ 0.38
COL5A1-205ENST00000464187 CCDC102BQ68D86 513 aa17.44■□□□□ 0.38
COL5A1-205ENST00000464187 UPF1Q92900 1129 aaKnown RBP eCLIP17.44■□□□□ 0.38
COL5A1-205ENST00000464187 TMX3Q96JJ7 454 aa17.44■□□□□ 0.38
COL5A1-205ENST00000464187 UBE4AQ14139 1066 aa17.44■□□□□ 0.38
COL5A1-205ENST00000464187 CWC27Q6UX04 472 aaKnown RBP17.44■□□□□ 0.38
COL5A1-205ENST00000464187 FSD1Q9BTV5 496 aa17.44■□□□□ 0.38
COL5A1-205ENST00000464187 WTIPA6NIX2 430 aaPredicted RBP17.43■□□□□ 0.38
COL5A1-205ENST00000464187 PDE6BP35913 854 aa17.43■□□□□ 0.38
COL5A1-205ENST00000464187 PHKA1P46020 1223 aa17.43■□□□□ 0.38
COL5A1-205ENST00000464187 SCARF1Q14162 830 aa17.43■□□□□ 0.38
COL5A1-205ENST00000464187 SLC16A10Q8TF71 515 aa17.43■□□□□ 0.38
COL5A1-205ENST00000464187 ZNF512BQ96KM6 892 aaPredicted RBP17.43■□□□□ 0.38
COL5A1-205ENST00000464187 ANKRD2Q9GZV1 360 aa17.43■□□□□ 0.38
COL5A1-205ENST00000464187 GZF1Q9H116 711 aaPredicted RBP17.43■□□□□ 0.38
COL5A1-205ENST00000464187 DIAPH3Q9NSV4 1193 aa17.43■□□□□ 0.38
COL5A1-205ENST00000464187 PAG1Q9NWQ8 432 aa17.43■□□□□ 0.38
COL5A1-205ENST00000464187 GOLIM4O00461 696 aa17.42■□□□□ 0.38
COL5A1-205ENST00000464187 SRGNP10124 158 aa17.42■□□□□ 0.38
COL5A1-205ENST00000464187 PTMSP20962 102 aa17.42■□□□□ 0.38
COL5A1-205ENST00000464187 FKBP4Q02790 459 aaKnown RBP eCLIP17.42■□□□□ 0.38
COL5A1-205ENST00000464187 PKP1Q13835 747 aa17.42■□□□□ 0.38
COL5A1-205ENST00000464187 CRAMP1Q96RY5 1269 aa17.42■□□□□ 0.38
COL5A1-205ENST00000464187 BAG4O95429 457 aaKnown RBP17.42■□□□□ 0.38
COL5A1-205ENST00000464187 MCAMP43121 646 aa17.42■□□□□ 0.38
COL5A1-205ENST00000464187 CUL4AQ13619 759 aa17.42■□□□□ 0.38
COL5A1-205ENST00000464187 UPF3BQ9BZI7 483 aaKnown RBP17.42■□□□□ 0.38
COL5A1-205ENST00000464187 SNRKQ9NRH2 765 aa17.42■□□□□ 0.38
COL5A1-205ENST00000464187 HIP1O00291 1037 aa17.41■□□□□ 0.38
COL5A1-205ENST00000464187 BBOX1O75936 387 aa17.41■□□□□ 0.38
COL5A1-205ENST00000464187 ARID4AP29374 1257 aaPredicted RBP17.41■□□□□ 0.38
COL5A1-205ENST00000464187 KCNJ4P48050 445 aa17.41■□□□□ 0.38
COL5A1-205ENST00000464187 PI16Q6UXB8 463 aa17.41■□□□□ 0.38
COL5A1-205ENST00000464187 SLC51AQ86UW1 340 aa17.41■□□□□ 0.38
COL5A1-205ENST00000464187 KBTBD3Q8NAB2 608 aa17.41■□□□□ 0.38
COL5A1-205ENST00000464187 RUFY2Q8WXA3 655 aa17.41■□□□□ 0.38
COL5A1-205ENST00000464187 BRPF3Q9ULD4 1205 aa17.41■□□□□ 0.38
COL5A1-205ENST00000464187 SNX14Q9Y5W7 946 aa17.41■□□□□ 0.38
COL5A1-205ENST00000464187 UQCRFS1P1P0C7P4 283 aa17.4■□□□□ 0.38
COL5A1-205ENST00000464187 ZAP70P43403 619 aa17.4■□□□□ 0.38
COL5A1-205ENST00000464187 BCAMP50895 628 aa17.4■□□□□ 0.38
COL5A1-205ENST00000464187 KIAA1211Q6ZU35 1233 aa17.4■□□□□ 0.38
COL5A1-205ENST00000464187 ANKRD31Q8N7Z5 1873 aa17.4■□□□□ 0.38
COL5A1-205ENST00000464187 FSD2A1L4K1 749 aa17.4■□□□□ 0.38
COL5A1-205ENST00000464187 NPR1P16066 1061 aa17.4■□□□□ 0.38
COL5A1-205ENST00000464187 ANKIB1Q9P2G1 1089 aa17.4■□□□□ 0.38
COL5A1-205ENST00000464187 NOL8Q76FK4 1167 aaKnown RBP17.39■□□□□ 0.37
COL5A1-205ENST00000464187 MASTLQ96GX5 879 aa17.39■□□□□ 0.37
COL5A1-205ENST00000464187 ZDHHC9Q9Y397 364 aa17.39■□□□□ 0.37
COL5A1-205ENST00000464187 ZNF804BA4D1E1 1349 aa17.38■□□□□ 0.37
COL5A1-205ENST00000464187 GYG1P46976 350 aa17.38■□□□□ 0.37
COL5A1-205ENST00000464187 SKOR2Q2VWA4 1001 aaPredicted RBP17.38■□□□□ 0.37
COL5A1-205ENST00000464187 CAVIN4Q5BKX8 364 aa17.38■□□□□ 0.37
COL5A1-205ENST00000464187 L1TD1Q5T7N2 865 aaKnown RBP17.38■□□□□ 0.37
COL5A1-205ENST00000464187 RASEFQ8IZ41 740 aa17.38■□□□□ 0.37
COL5A1-205ENST00000464187 FAM227BQ96M60 508 aa17.38■□□□□ 0.37
COL5A1-205ENST00000464187 XDHP47989 1333 aa17.38■□□□□ 0.37
COL5A1-205ENST00000464187 ARAP2Q8WZ64 1704 aa17.38■□□□□ 0.37
COL5A1-205ENST00000464187 GOLGA6L22H0YM25 854 aa17.37■□□□□ 0.37
COL5A1-205ENST00000464187 KLRK1P26718 216 aa17.37■□□□□ 0.37
COL5A1-205ENST00000464187 ALDH1B1P30837 517 aa17.37■□□□□ 0.37
COL5A1-205ENST00000464187 PTH1RQ03431 593 aa17.37■□□□□ 0.37
COL5A1-205ENST00000464187 NMIQ13287 307 aaPredicted RBP17.37■□□□□ 0.37
COL5A1-205ENST00000464187 RASGRF1Q13972 1273 aa17.37■□□□□ 0.37
COL5A1-205ENST00000464187 IL27Q8NEV9 243 aa17.37■□□□□ 0.37
COL5A1-205ENST00000464187 HMG20BQ9P0W2 317 aa17.37■□□□□ 0.37
COL5A1-205ENST00000464187 RFX7Q2KHR2 1363 aa17.37■□□□□ 0.37
COL5A1-205ENST00000464187 H0YIN7 160 aa17.37■□□□□ 0.37
COL5A1-205ENST00000464187 PPEF1O14829 653 aaPredicted RBP17.37■□□□□ 0.37
COL5A1-205ENST00000464187 TMC4Q7Z404 712 aa17.37■□□□□ 0.37
COL5A1-205ENST00000464187 VPS37DQ86XT2 251 aa17.37■□□□□ 0.37
COL5A1-205ENST00000464187 INTS4Q96HW7 963 aaKnown RBP17.37■□□□□ 0.37
COL5A1-205ENST00000464187 FAM84BQ96KN1 310 aaPredicted RBP17.37■□□□□ 0.37
COL5A1-205ENST00000464187 TTC14Q96N46 770 aa17.37■□□□□ 0.37
COL5A1-205ENST00000464187 NSFL1CQ9UNZ2 370 aaKnown RBP17.37■□□□□ 0.37
COL5A1-205ENST00000464187 GOLGB1Q14789 3259 aaKnown RBP17.37■□□□□ 0.37
COL5A1-205ENST00000464187 A0A1B0GUL6 1792 aa17.36■□□□□ 0.37
COL5A1-205ENST00000464187 A0A0D9SFI3 127 aa17.36■□□□□ 0.37
COL5A1-205ENST00000464187 GOLGA6L3A6NEY3 463 aa17.36■□□□□ 0.37
COL5A1-205ENST00000464187 CHGBP05060 677 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms