RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 CABP1Q9NZU7 370 aa4.26□□□□□ -1.73
SMC4-203ENST00000462668 CILPO75339 1184 aa4.26□□□□□ -1.73
SMC4-203ENST00000462668 TBX4P57082 545 aa4.26□□□□□ -1.73
SMC4-203ENST00000462668 TYRO3Q06418 890 aa4.26□□□□□ -1.73
SMC4-203ENST00000462668 TKFCQ3LXA3 575 aa4.26□□□□□ -1.73
SMC4-203ENST00000462668 RELL1Q8IUW5 271 aa4.26□□□□□ -1.73
SMC4-203ENST00000462668 CCNJLQ8IV13 435 aa4.26□□□□□ -1.73
SMC4-203ENST00000462668 IER2Q9BTL4 223 aa4.26□□□□□ -1.73
SMC4-203ENST00000462668 ZNF700Q9H0M5 742 aa4.26□□□□□ -1.73
SMC4-203ENST00000462668 NFKBIEO00221 500 aa4.26□□□□□ -1.73
SMC4-203ENST00000462668 SMAD7O15105 426 aaKnown RBP4.26□□□□□ -1.73
SMC4-203ENST00000462668 PDPK1O15530 556 aa4.26□□□□□ -1.73
SMC4-203ENST00000462668 PHACTR2O75167 634 aa4.26□□□□□ -1.73
SMC4-203ENST00000462668 KANK3Q6NY19 840 aa4.26□□□□□ -1.73
SMC4-203ENST00000462668 NLRP13Q86W25 1043 aa4.26□□□□□ -1.73
SMC4-203ENST00000462668 TRIM42Q8IWZ5 723 aa4.26□□□□□ -1.73
SMC4-203ENST00000462668 NEUROD4Q9HD90 331 aa4.26□□□□□ -1.73
SMC4-203ENST00000462668 CCSAPQ6IQ19 270 aaPredicted RBP4.25□□□□□ -1.73
SMC4-203ENST00000462668 LIAT1Q6ZQX7 453 aa4.25□□□□□ -1.73
SMC4-203ENST00000462668 OR13H1Q8NG92 308 aa4.25□□□□□ -1.73
SMC4-203ENST00000462668 ZSCAN10Q96SZ4 725 aaPredicted RBP4.25□□□□□ -1.73
SMC4-203ENST00000462668 SRRTQ9BXP5 876 aaKnown RBP4.25□□□□□ -1.73
SMC4-203ENST00000462668 SSBP05455 408 aaKnown RBP eCLIP4.25□□□□□ -1.73
SMC4-203ENST00000462668 CAMK2GQ13555 558 aaPredicted RBP4.25□□□□□ -1.73
SMC4-203ENST00000462668 NFE2Q16621 373 aaPredicted RBP4.25□□□□□ -1.73
SMC4-203ENST00000462668 HSP90AB2PQ58FF8 381 aa4.25□□□□□ -1.73
SMC4-203ENST00000462668 IFFO2Q5TF58 517 aa4.25□□□□□ -1.73
SMC4-203ENST00000462668 NECAB3Q96P71 396 aaPredicted RBP4.25□□□□□ -1.73
SMC4-203ENST00000462668 PLAAQ9Y263 795 aa4.25□□□□□ -1.73
SMC4-203ENST00000462668 SOX18P35713 384 aa4.25□□□□□ -1.73
SMC4-203ENST00000462668 CDKN1CP49918 316 aaPredicted RBP4.25□□□□□ -1.73
SMC4-203ENST00000462668 RAB15P59190 212 aa4.25□□□□□ -1.73
SMC4-203ENST00000462668 MPP2Q14168 576 aa4.25□□□□□ -1.73
SMC4-203ENST00000462668 RHPN1Q8TCX5 695 aa4.25□□□□□ -1.73
SMC4-203ENST00000462668 MARVELD3Q96A59 401 aa4.25□□□□□ -1.73
SMC4-203ENST00000462668 PARP3Q9Y6F1 533 aa4.25□□□□□ -1.73
SMC4-203ENST00000462668 A0A087X0B3 334 aa4.24□□□□□ -1.73
SMC4-203ENST00000462668 EFSO43281 561 aa4.24□□□□□ -1.73
SMC4-203ENST00000462668 PF4P02776 101 aa4.24□□□□□ -1.73
SMC4-203ENST00000462668 ZC3H12BQ5HYM0 836 aaKnown RBP4.24□□□□□ -1.73
SMC4-203ENST00000462668 PMM1Q92871 262 aa4.24□□□□□ -1.73
SMC4-203ENST00000462668 ABI2Q9NYB9 513 aaPredicted RBP4.24□□□□□ -1.73
SMC4-203ENST00000462668 LEMD3Q9Y2U8 911 aa4.24□□□□□ -1.73
SMC4-203ENST00000462668 BMP6P22004 513 aa4.24□□□□□ -1.73
SMC4-203ENST00000462668 UBAP2LQ14157 1087 aaKnown RBP4.24□□□□□ -1.73
SMC4-203ENST00000462668 EHBP1Q8NDI1 1231 aa4.24□□□□□ -1.73
SMC4-203ENST00000462668 UBAP1LF5GYI3 381 aa4.24□□□□□ -1.73
SMC4-203ENST00000462668 EYA4O95677 639 aa4.24□□□□□ -1.73
SMC4-203ENST00000462668 RASIP1Q5U651 963 aa4.24□□□□□ -1.73
SMC4-203ENST00000462668 RNF180Q86T96 592 aa4.24□□□□□ -1.73
SMC4-203ENST00000462668 GATAD2BQ8WXI9 593 aa4.24□□□□□ -1.73
SMC4-203ENST00000462668 ESF1Q9H501 851 aaKnown RBP4.24□□□□□ -1.73
SMC4-203ENST00000462668 FAM83GA6ND36 823 aa4.23□□□□□ -1.73
SMC4-203ENST00000462668 C8orf34Q49A92 452 aa4.23□□□□□ -1.73
SMC4-203ENST00000462668 LSRQ86X29 649 aaPredicted RBP4.23□□□□□ -1.73
SMC4-203ENST00000462668 KISS1RQ969F8 398 aaPredicted RBP4.23□□□□□ -1.73
SMC4-203ENST00000462668 PLD4Q96BZ4 506 aa4.23□□□□□ -1.73
SMC4-203ENST00000462668 CAMKK2Q96RR4 588 aa4.23□□□□□ -1.73
SMC4-203ENST00000462668 EFCC1Q9HA90 598 aa4.23□□□□□ -1.73
SMC4-203ENST00000462668 PKD2L1Q9P0L9 805 aa4.23□□□□□ -1.73
SMC4-203ENST00000462668 TIMP2P16035 220 aa4.23□□□□□ -1.73
SMC4-203ENST00000462668 SELPP16109 830 aa4.23□□□□□ -1.73
SMC4-203ENST00000462668 MEIOBQ8N635 442 aa4.23□□□□□ -1.73
SMC4-203ENST00000462668 FBXO41Q8TF61 875 aa4.23□□□□□ -1.73
SMC4-203ENST00000462668 FAM126AQ9BYI3 521 aaPredicted RBP4.23□□□□□ -1.73
SMC4-203ENST00000462668 GSX2Q9BZM3 304 aa4.23□□□□□ -1.73
SMC4-203ENST00000462668 PGBD3Q8N328 593 aa4.23□□□□□ -1.73
SMC4-203ENST00000462668 PRPF38AQ8NAV1 312 aaKnown RBP4.23□□□□□ -1.73
SMC4-203ENST00000462668 NKD1Q969G9 470 aa4.23□□□□□ -1.73
SMC4-203ENST00000462668 LATS2Q9NRM7 1088 aa4.23□□□□□ -1.73
SMC4-203ENST00000462668 ZMYM5Q9UJ78 669 aa4.23□□□□□ -1.73
SMC4-203ENST00000462668 PPP1R12AO14974 1030 aaPredicted RBP4.22□□□□□ -1.73
SMC4-203ENST00000462668 ADCY3O60266 1144 aa4.22□□□□□ -1.73
SMC4-203ENST00000462668 STAT3P40763 770 aa4.22□□□□□ -1.73
SMC4-203ENST00000462668 EXOC8Q8IYI6 725 aa4.22□□□□□ -1.73
SMC4-203ENST00000462668 TMEM102Q8N9M5 508 aaPredicted RBP4.22□□□□□ -1.73
SMC4-203ENST00000462668 NINJ1Q92982 152 aa4.22□□□□□ -1.73
SMC4-203ENST00000462668 MRGPRX2Q96LB1 330 aa4.22□□□□□ -1.73
SMC4-203ENST00000462668 APBA2Q99767 749 aa4.22□□□□□ -1.73
SMC4-203ENST00000462668 UBP1Q9NZI7 540 aa4.22□□□□□ -1.73
SMC4-203ENST00000462668 ZNF232Q9UNY5 417 aa4.22□□□□□ -1.73
SMC4-203ENST00000462668 SPINT1O43278 529 aa4.22□□□□□ -1.73
SMC4-203ENST00000462668 MAP3K6O95382 1288 aa4.22□□□□□ -1.73
SMC4-203ENST00000462668 THBS1P07996 1170 aa4.22□□□□□ -1.73
SMC4-203ENST00000462668 BRDTQ58F21 947 aaPredicted RBP4.22□□□□□ -1.73
SMC4-203ENST00000462668 TMED8Q6PL24 325 aaPredicted RBP4.22□□□□□ -1.73
SMC4-203ENST00000462668 AFAP1L2Q8N4X5 818 aa4.22□□□□□ -1.73
SMC4-203ENST00000462668 OXCT2Q9BYC2 517 aaPredicted RBP4.22□□□□□ -1.73
SMC4-203ENST00000462668 TNKS2Q9H2K2 1166 aa4.22□□□□□ -1.73
SMC4-203ENST00000462668 POLR3DP05423 398 aaPredicted RBP4.22□□□□□ -1.73
SMC4-203ENST00000462668 GBP2P32456 591 aaPredicted RBP4.22□□□□□ -1.73
SMC4-203ENST00000462668 NNTQ13423 1086 aa4.22□□□□□ -1.73
SMC4-203ENST00000462668 HSH2DQ96JZ2 352 aa4.22□□□□□ -1.73
SMC4-203ENST00000462668 PRDM16Q9HAZ2 1276 aa4.22□□□□□ -1.73
SMC4-203ENST00000462668 TLR6Q9Y2C9 796 aa4.22□□□□□ -1.73
SMC4-203ENST00000462668 TRIM55Q9BYV6 548 aa4.22□□□□□ -1.73
SMC4-203ENST00000462668 CEP44Q9C0F1 390 aa4.22□□□□□ -1.73
SMC4-203ENST00000462668 ZNF576Q9H609 170 aa4.22□□□□□ -1.73
SMC4-203ENST00000462668 LIN7BQ9HAP6 207 aa4.22□□□□□ -1.73
SMC4-203ENST00000462668 ACTR10Q9NZ32 417 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms