RNA–Protein interactions for RNA: ENST00000448745.5

CPSF7-206, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CPSF7, Length 1,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-206ENST00000448745 DNAAF4Q8WXU2 420 aa9.9□□□□□ -0.82
CPSF7-206ENST00000448745 DACT1Q9NYF0 836 aa9.9□□□□□ -0.82
CPSF7-206ENST00000448745 HMG20BQ9P0W2 317 aa9.9□□□□□ -0.82
CPSF7-206ENST00000448745 TPCN1Q9ULQ1 816 aa9.9□□□□□ -0.82
CPSF7-206ENST00000448745 LAMB4A4D0S4 1761 aa9.9□□□□□ -0.82
CPSF7-206ENST00000448745 PTCD1O75127 700 aaKnown RBP9.9□□□□□ -0.83
CPSF7-206ENST00000448745 TRIM37O94972 964 aa9.9□□□□□ -0.83
CPSF7-206ENST00000448745 ZNF165P49910 485 aa9.9□□□□□ -0.83
CPSF7-206ENST00000448745 CAMK4Q16566 473 aa9.9□□□□□ -0.83
CPSF7-206ENST00000448745 NECAB1Q8N987 351 aa9.9□□□□□ -0.83
CPSF7-206ENST00000448745 BICD2Q8TD16 824 aa9.9□□□□□ -0.83
CPSF7-206ENST00000448745 UPF1Q92900 1129 aaKnown RBP eCLIP9.9□□□□□ -0.833e-8■■□□□ 11.9
CPSF7-206ENST00000448745 MRFAP1L1Q96HT8 127 aa9.9□□□□□ -0.83
CPSF7-206ENST00000448745 PALLDQ8WX93 1383 aa9.9□□□□□ -0.83
CPSF7-206ENST00000448745 MYH14Q7Z406 1995 aaKnown RBP9.89□□□□□ -0.83
CPSF7-206ENST00000448745 SLC27A2O14975 620 aa9.89□□□□□ -0.83
CPSF7-206ENST00000448745 ALDH1L1O75891 902 aa9.89□□□□□ -0.83
CPSF7-206ENST00000448745 RPS6KB1P23443 525 aa9.89□□□□□ -0.83
CPSF7-206ENST00000448745 LRMPQ12912 555 aa9.89□□□□□ -0.83
CPSF7-206ENST00000448745 KRT32Q14532 448 aa9.89□□□□□ -0.83
CPSF7-206ENST00000448745 DHX8Q14562 1220 aaKnown RBP9.89□□□□□ -0.83
CPSF7-206ENST00000448745 STX1AQ16623 288 aa9.89□□□□□ -0.83
CPSF7-206ENST00000448745 SLFNL1Q499Z3 407 aa9.89□□□□□ -0.83
CPSF7-206ENST00000448745 BEND3Q5T5X7 828 aa9.89□□□□□ -0.83
CPSF7-206ENST00000448745 CKAP2LQ8IYA6 745 aa9.89□□□□□ -0.83
CPSF7-206ENST00000448745 MAP4K1Q92918 833 aa9.89□□□□□ -0.83
CPSF7-206ENST00000448745 FMNL2Q96PY5 1086 aa9.89□□□□□ -0.83
CPSF7-206ENST00000448745 COL5A3P25940 1745 aaPredicted RBP9.89□□□□□ -0.83
CPSF7-206ENST00000448745 TAF1LQ8IZX4 1826 aa9.88□□□□□ -0.83
CPSF7-206ENST00000448745 CCDC66A2RUB6 948 aa9.88□□□□□ -0.83
CPSF7-206ENST00000448745 FERMT3Q86UX7 667 aa9.88□□□□□ -0.83
CPSF7-206ENST00000448745 TTC5Q8N0Z6 440 aa9.88□□□□□ -0.83
CPSF7-206ENST00000448745 KRT222Q8N1A0 295 aa9.88□□□□□ -0.83
CPSF7-206ENST00000448745 KIF18AQ8NI77 898 aa9.88□□□□□ -0.83
CPSF7-206ENST00000448745 ERO1AQ96HE7 468 aa9.88□□□□□ -0.83
CPSF7-206ENST00000448745 ZSCAN16Q9H4T2 348 aaPredicted RBP9.88□□□□□ -0.83
CPSF7-206ENST00000448745 PHAXQ9H814 394 aaKnown RBP9.88□□□□□ -0.83
CPSF7-206ENST00000448745 KCND1Q9NSA2 647 aa9.88□□□□□ -0.83
CPSF7-206ENST00000448745 CFAP45Q9UL16 551 aa9.88□□□□□ -0.83
CPSF7-206ENST00000448745 CHMP3Q9Y3E7 222 aa9.88□□□□□ -0.83
CPSF7-206ENST00000448745 USP16Q9Y5T5 823 aa9.88□□□□□ -0.83
CPSF7-206ENST00000448745 MED23Q9ULK4 1368 aa9.88□□□□□ -0.83
CPSF7-206ENST00000448745 LOC102724428A0A0B4J2F2 783 aa9.87□□□□□ -0.83
CPSF7-206ENST00000448745 SNRPA1P09661 255 aaKnown RBP9.87□□□□□ -0.83
CPSF7-206ENST00000448745 SIK1P57059 783 aa9.87□□□□□ -0.83
CPSF7-206ENST00000448745 NMIQ13287 307 aaPredicted RBP9.87□□□□□ -0.83
CPSF7-206ENST00000448745 ITPK1Q13572 414 aa9.87□□□□□ -0.83
CPSF7-206ENST00000448745 PDIA6Q15084 440 aa9.87□□□□□ -0.83
CPSF7-206ENST00000448745 PTPN14Q15678 1187 aa9.87□□□□□ -0.83
CPSF7-206ENST00000448745 LRP10Q7Z4F1 713 aa9.87□□□□□ -0.83
CPSF7-206ENST00000448745 PROM2Q8N271 834 aa9.87□□□□□ -0.83
CPSF7-206ENST00000448745 CACTINQ8WUQ7 758 aaKnown RBP9.87□□□□□ -0.83
CPSF7-206ENST00000448745 SMARCC1Q92922 1105 aaPredicted RBP9.87□□□□□ -0.83
CPSF7-206ENST00000448745 DNAJC25Q9H1X3 360 aa9.87□□□□□ -0.83
CPSF7-206ENST00000448745 NRBP1Q9UHY1 535 aa9.87□□□□□ -0.83
CPSF7-206ENST00000448745 RGPD3A6NKT7 1758 aaPredicted RBP9.87□□□□□ -0.83
CPSF7-206ENST00000448745 RGPD4Q7Z3J3 1758 aa9.87□□□□□ -0.83
CPSF7-206ENST00000448745 RFX7Q2KHR2 1363 aa9.87□□□□□ -0.83
CPSF7-206ENST00000448745 RREB1Q92766 1687 aa9.87□□□□□ -0.83
CPSF7-206ENST00000448745 NBPF7P0C2Y1 421 aaPredicted RBP9.87□□□□□ -0.83
CPSF7-206ENST00000448745 GSDMDP57764 484 aa9.87□□□□□ -0.83
CPSF7-206ENST00000448745 RESTQ13127 1097 aa9.87□□□□□ -0.83
CPSF7-206ENST00000448745 TSGA10IPQ3SY00 556 aa9.87□□□□□ -0.83
CPSF7-206ENST00000448745 AACSQ86V21 672 aa9.87□□□□□ -0.83
CPSF7-206ENST00000448745 LRRC8AQ8IWT6 810 aa9.87□□□□□ -0.83
CPSF7-206ENST00000448745 DNAJC10Q8IXB1 793 aa9.87□□□□□ -0.83
CPSF7-206ENST00000448745 NBPF26B4DH59 902 aa9.86□□□□□ -0.83
CPSF7-206ENST00000448745 TUBB4AP04350 444 aa9.86□□□□□ -0.83
CPSF7-206ENST00000448745 KCNQ4P56696 695 aa9.86□□□□□ -0.83
CPSF7-206ENST00000448745 PROSER3Q2NL68 480 aa9.86□□□□□ -0.83
CPSF7-206ENST00000448745 NBPF14Q5TI25 921 aa9.86□□□□□ -0.83
CPSF7-206ENST00000448745 ATL3Q6DD88 541 aa9.86□□□□□ -0.83
CPSF7-206ENST00000448745 NBPF10Q6P3W6 841 aaKnown RBP9.86□□□□□ -0.83
CPSF7-206ENST00000448745 NYAP1Q6ZVC0 841 aa9.86□□□□□ -0.83
CPSF7-206ENST00000448745 NBPF15Q8N660 670 aa9.86□□□□□ -0.83
CPSF7-206ENST00000448745 LRRC4BQ9NT99 713 aa9.86□□□□□ -0.83
CPSF7-206ENST00000448745 ANO10Q9NW15 660 aa9.86□□□□□ -0.83
CPSF7-206ENST00000448745 ADCY9O60503 1353 aa9.86□□□□□ -0.83
CPSF7-206ENST00000448745 H3BQV1 296 aa9.85□□□□□ -0.83
CPSF7-206ENST00000448745 PLSCR1O15162 318 aa9.85□□□□□ -0.83
CPSF7-206ENST00000448745 NR1I2O75469 434 aa9.85□□□□□ -0.83
CPSF7-206ENST00000448745 SLU7O95391 586 aaKnown RBP9.85□□□□□ -0.83
CPSF7-206ENST00000448745 CYP19A1P11511 503 aaPredicted RBP9.85□□□□□ -0.83
CPSF7-206ENST00000448745 IQCB1Q15051 598 aa9.85□□□□□ -0.83
CPSF7-206ENST00000448745 CCDC144BQ3MJ40 725 aa9.85□□□□□ -0.83
CPSF7-206ENST00000448745 IFFO2Q5TF58 517 aa9.85□□□□□ -0.83
CPSF7-206ENST00000448745 CCDC144CPQ8IYA2 1237 aa9.85□□□□□ -0.83
CPSF7-206ENST00000448745 ZNF592Q92610 1267 aa9.85□□□□□ -0.83
CPSF7-206ENST00000448745 GTF3C6Q969F1 213 aa9.85□□□□□ -0.83
CPSF7-206ENST00000448745 FSD1Q9BTV5 496 aa9.85□□□□□ -0.83
CPSF7-206ENST00000448745 NAT10Q9H0A0 1025 aaKnown RBP9.85□□□□□ -0.83
CPSF7-206ENST00000448745 CHPF2Q9P2E5 772 aa9.85□□□□□ -0.83
CPSF7-206ENST00000448745 LAMA4Q16363 1823 aa9.85□□□□□ -0.83
CPSF7-206ENST00000448745 PI4KAP2A4QPH2 592 aa9.85□□□□□ -0.83
CPSF7-206ENST00000448745 CCDC69A6NI79 296 aa9.85□□□□□ -0.83
CPSF7-206ENST00000448745 BECN2A8MW95 431 aa9.85□□□□□ -0.83
CPSF7-206ENST00000448745 NRDCO43847 1150 aa9.85□□□□□ -0.83
CPSF7-206ENST00000448745 SLFN14P0C7P3 912 aa9.85□□□□□ -0.83
CPSF7-206ENST00000448745 EIF2S2P20042 333 aaKnown RBP9.85□□□□□ -0.83
CPSF7-206ENST00000448745 G3BP1Q13283 466 aaKnown RBP eCLIP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms