RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 KINO60870 393 aaKnown RBP17.48■□□□□ 0.39
CACTIN-203ENST00000429344 RPS6KB1P23443 525 aa17.48■□□□□ 0.39
CACTIN-203ENST00000429344 MTX1Q13505 466 aa17.48■□□□□ 0.39
CACTIN-203ENST00000429344 CCAR1Q8IX12 1150 aaKnown RBP17.48■□□□□ 0.39
CACTIN-203ENST00000429344 CNNM1Q9NRU3 951 aa17.48■□□□□ 0.39
CACTIN-203ENST00000429344 USP27XA6NNY8 438 aa17.48■□□□□ 0.39
CACTIN-203ENST00000429344 SMC2O95347 1197 aa17.48■□□□□ 0.39
CACTIN-203ENST00000429344 SKILP12757 684 aa17.48■□□□□ 0.39
CACTIN-203ENST00000429344 ANKRD1Q15327 319 aa17.48■□□□□ 0.39
CACTIN-203ENST00000429344 PIGBQ92521 554 aa17.48■□□□□ 0.39
CACTIN-203ENST00000429344 PGBD1Q96JS3 809 aa17.48■□□□□ 0.39
CACTIN-203ENST00000429344 TRMT112Q9UI30 125 aaKnown RBP17.48■□□□□ 0.39
CACTIN-203ENST00000429344 PXDNLA1KZ92 1463 aa17.48■□□□□ 0.39
CACTIN-203ENST00000429344 NCBP1Q09161 790 aaKnown RBP17.48■□□□□ 0.39
CACTIN-203ENST00000429344 GTF2E1P29083 439 aaPredicted RBP17.47■□□□□ 0.39
CACTIN-203ENST00000429344 PTPN14Q15678 1187 aa17.47■□□□□ 0.39
CACTIN-203ENST00000429344 TNNI3KQ59H18 835 aa17.47■□□□□ 0.39
CACTIN-203ENST00000429344 FPGT-TNNI3KV9GXZ4 949 aa17.47■□□□□ 0.39
CACTIN-203ENST00000429344 MED1Q15648 1581 aaPredicted RBP17.47■□□□□ 0.39
CACTIN-203ENST00000429344 C11orf57Q6ZUT1 292 aaPredicted RBP17.47■□□□□ 0.39
CACTIN-203ENST00000429344 NEK1Q96PY6 1258 aa17.47■□□□□ 0.39
CACTIN-203ENST00000429344 DDB1Q16531 1140 aa17.47■□□□□ 0.39
CACTIN-203ENST00000429344 MAP4K1Q92918 833 aa17.47■□□□□ 0.39
CACTIN-203ENST00000429344 CLSTN2Q9H4D0 955 aa17.47■□□□□ 0.39
CACTIN-203ENST00000429344 IFIT5Q13325 482 aaKnown RBP17.46■□□□□ 0.39
CACTIN-203ENST00000429344 OTUD7BQ6GQQ9 843 aa17.46■□□□□ 0.39
CACTIN-203ENST00000429344 CPDO75976 1380 aa17.46■□□□□ 0.39
CACTIN-203ENST00000429344 STK11IPQ8N1F8 1099 aa17.46■□□□□ 0.39
CACTIN-203ENST00000429344 APOBRQ0VD83 1088 aa17.46■□□□□ 0.38
CACTIN-203ENST00000429344 FAM177A1Q8N128 213 aaPredicted RBP17.46■□□□□ 0.38
CACTIN-203ENST00000429344 AOPEPQ8N6M6 819 aa17.46■□□□□ 0.38
CACTIN-203ENST00000429344 IFIT1P09914 478 aaKnown RBP17.45■□□□□ 0.38
CACTIN-203ENST00000429344 GTF2F1P35269 517 aaKnown RBP eCLIP17.45■□□□□ 0.38
CACTIN-203ENST00000429344 PTPN12Q05209 780 aaKnown RBP17.45■□□□□ 0.38
CACTIN-203ENST00000429344 TOB2Q14106 344 aaPredicted RBP17.45■□□□□ 0.38
CACTIN-203ENST00000429344 TTC39AQ5SRH9 613 aa17.45■□□□□ 0.38
CACTIN-203ENST00000429344 TEX13AQ9BXU3 409 aaPredicted RBP17.45■□□□□ 0.38
CACTIN-203ENST00000429344 VGLL3A8MV65 326 aa17.45■□□□□ 0.38
CACTIN-203ENST00000429344 FSIP1Q8NA03 581 aa17.45■□□□□ 0.38
CACTIN-203ENST00000429344 TM6SF1Q9BZW5 370 aa17.45■□□□□ 0.38
CACTIN-203ENST00000429344 DBNLQ9UJU6 430 aaKnown RBP17.45■□□□□ 0.38
CACTIN-203ENST00000429344 POLR3DP05423 398 aaPredicted RBP17.45■□□□□ 0.38
CACTIN-203ENST00000429344 METTL24Q5JXM2 366 aa17.45■□□□□ 0.38
CACTIN-203ENST00000429344 HOMER1Q86YM7 354 aa17.45■□□□□ 0.38
CACTIN-203ENST00000429344 CCDC69A6NI79 296 aa17.44■□□□□ 0.38
CACTIN-203ENST00000429344 ZNF215Q9UL58 517 aaPredicted RBP17.44■□□□□ 0.38
CACTIN-203ENST00000429344 KIF1AQ12756 1690 aa17.44■□□□□ 0.38
CACTIN-203ENST00000429344 SMTNL1A8MU46 457 aa17.44■□□□□ 0.38
CACTIN-203ENST00000429344 PTPN21Q16825 1174 aa17.44■□□□□ 0.38
CACTIN-203ENST00000429344 CCDC158Q5M9N0 1113 aa17.44■□□□□ 0.38
CACTIN-203ENST00000429344 CCDC191Q8NCU4 936 aa17.44■□□□□ 0.38
CACTIN-203ENST00000429344 TRERF1Q96PN7 1200 aa17.44■□□□□ 0.38
CACTIN-203ENST00000429344 LRRC24Q50LG9 513 aa17.44■□□□□ 0.38
CACTIN-203ENST00000429344 LDHAL6AQ6ZMR3 332 aa17.44■□□□□ 0.38
CACTIN-203ENST00000429344 TMX1Q9H3N1 280 aa17.43■□□□□ 0.38
CACTIN-203ENST00000429344 NGLY1Q96IV0 654 aa17.43■□□□□ 0.38
CACTIN-203ENST00000429344 COPRSQ9NQ92 184 aa17.43■□□□□ 0.38
CACTIN-203ENST00000429344 CFAP45Q9UL16 551 aa17.43■□□□□ 0.38
CACTIN-203ENST00000429344 ELF2Q15723 593 aa17.42■□□□□ 0.38
CACTIN-203ENST00000429344 A0A1B0GVL5 298 aa17.42■□□□□ 0.38
CACTIN-203ENST00000429344 HAND2P61296 217 aa17.42■□□□□ 0.38
CACTIN-203ENST00000429344 HSP90AA4PQ58FG1 418 aa17.42■□□□□ 0.38
CACTIN-203ENST00000429344 AEBP2Q6ZN18 517 aaPredicted RBP17.42■□□□□ 0.38
CACTIN-203ENST00000429344 PUS3Q9BZE2 481 aaKnown RBP17.42■□□□□ 0.38
CACTIN-203ENST00000429344 IL15P40933 162 aaPredicted RBP17.42■□□□□ 0.38
CACTIN-203ENST00000429344 OVOS2A0A0G2JMS6 1433 aa17.42■□□□□ 0.38
CACTIN-203ENST00000429344 EPB41L2O43491 1005 aaKnown RBP17.41■□□□□ 0.38
CACTIN-203ENST00000429344 APPP05067 770 aa17.41■□□□□ 0.38
CACTIN-203ENST00000429344 ATP6V1AP38606 617 aa17.41■□□□□ 0.38
CACTIN-203ENST00000429344 BICDL1Q6ZP65 573 aa17.41■□□□□ 0.38
CACTIN-203ENST00000429344 SYNE4Q8N205 404 aa17.41■□□□□ 0.38
CACTIN-203ENST00000429344 C8orf37Q96NL8 207 aa17.41■□□□□ 0.38
CACTIN-203ENST00000429344 ZBTB1Q9Y2K1 713 aa17.41■□□□□ 0.38
CACTIN-203ENST00000429344 TCIRG1Q13488 830 aa17.41■□□□□ 0.38
CACTIN-203ENST00000429344 DZIP3Q86Y13 1208 aaKnown RBP17.41■□□□□ 0.38
CACTIN-203ENST00000429344 USP28Q96RU2 1077 aa17.41■□□□□ 0.38
CACTIN-203ENST00000429344 HSP90AB3PQ58FF7 597 aa17.4■□□□□ 0.38
CACTIN-203ENST00000429344 A0A1B0GUL7 405 aa17.4■□□□□ 0.38
CACTIN-203ENST00000429344 EYA2O00167 538 aa17.4■□□□□ 0.38
CACTIN-203ENST00000429344 GTPBP4Q9BZE4 634 aaKnown RBP17.4■□□□□ 0.38
CACTIN-203ENST00000429344 ATG3Q9NT62 314 aa17.4■□□□□ 0.38
CACTIN-203ENST00000429344 CAMTA1Q9Y6Y1 1673 aa17.4■□□□□ 0.38
CACTIN-203ENST00000429344 PTPDC1A2A3K4 754 aa17.4■□□□□ 0.38
CACTIN-203ENST00000429344 TAF5LO75529 589 aa17.4■□□□□ 0.38
CACTIN-203ENST00000429344 SCRN1Q12765 414 aa17.4■□□□□ 0.38
CACTIN-203ENST00000429344 TMC6Q7Z403 805 aa17.4■□□□□ 0.38
CACTIN-203ENST00000429344 STK38Q15208 465 aa17.39■□□□□ 0.37
CACTIN-203ENST00000429344 STX1AQ16623 288 aa17.39■□□□□ 0.37
CACTIN-203ENST00000429344 LRRC8AQ8IWT6 810 aa17.39■□□□□ 0.37
CACTIN-203ENST00000429344 CEP57L1Q8IYX8 460 aa17.39■□□□□ 0.37
CACTIN-203ENST00000429344 HELBQ8NG08 1087 aaPredicted RBP17.39■□□□□ 0.37
CACTIN-203ENST00000429344 GTF3C6Q969F1 213 aa17.39■□□□□ 0.37
CACTIN-203ENST00000429344 UBAP1LF5GYI3 381 aa17.39■□□□□ 0.37
CACTIN-203ENST00000429344 CYP21A2P08686 494 aa17.39■□□□□ 0.37
CACTIN-203ENST00000429344 PDIA4P13667 645 aaKnown RBP17.39■□□□□ 0.37
CACTIN-203ENST00000429344 TDRD7Q8NHU6 1098 aaKnown RBP17.39■□□□□ 0.37
CACTIN-203ENST00000429344 COL5A2P05997 1499 aaPredicted RBP17.38■□□□□ 0.37
CACTIN-203ENST00000429344 A0A0G2JLW4 131 aa17.38■□□□□ 0.37
CACTIN-203ENST00000429344 ST7Q9NRC1 585 aa17.38■□□□□ 0.37
CACTIN-203ENST00000429344 ANKRD7Q92527 254 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms