RNA–Protein interactions for RNA: ENST00000412052.4

ATRIP-204, Transcript of ATR interacting protein, humanhuman

TSL 1 (best) BASIC

Gene ATRIP, Length 2,721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-204ENST00000412052 IQCB1Q15051 598 aa16.73■□□□□ 0.27
ATRIP-204ENST00000412052 ATP2B3Q16720 1220 aa16.73■□□□□ 0.27
ATRIP-204ENST00000412052 ZNF330Q9Y3S2 320 aaPredicted RBP16.73■□□□□ 0.27
ATRIP-204ENST00000412052 EXOSC10Q01780 885 aaKnown RBP16.73■□□□□ 0.27
ATRIP-204ENST00000412052 SNW1Q13573 536 aaKnown RBP16.73■□□□□ 0.27
ATRIP-204ENST00000412052 GLI3P10071 1580 aa16.72■□□□□ 0.27
ATRIP-204ENST00000412052 ADORA1P30542 326 aa16.72■□□□□ 0.27
ATRIP-204ENST00000412052 CBX1P83916 185 aa16.72■□□□□ 0.27
ATRIP-204ENST00000412052 FKBP4Q02790 459 aaKnown RBP eCLIP16.72■□□□□ 0.27
ATRIP-204ENST00000412052 ZMYM1Q5SVZ6 1142 aa16.72■□□□□ 0.27
ATRIP-204ENST00000412052 PI16Q6UXB8 463 aa16.72■□□□□ 0.27
ATRIP-204ENST00000412052 OSBP2Q969R2 916 aa16.72■□□□□ 0.27
ATRIP-204ENST00000412052 CCDC94Q9BW85 323 aaPredicted RBP16.72■□□□□ 0.27
ATRIP-204ENST00000412052 A0A1B0GUL7 405 aa16.72■□□□□ 0.27
ATRIP-204ENST00000412052 USP27XA6NNY8 438 aa16.72■□□□□ 0.27
ATRIP-204ENST00000412052 H7C1W4 665 aa16.72■□□□□ 0.27
ATRIP-204ENST00000412052 PDIA3P30101 505 aaKnown RBP16.72■□□□□ 0.27
ATRIP-204ENST00000412052 PPP4R3BQ5MIZ7 849 aa16.72■□□□□ 0.27
ATRIP-204ENST00000412052 PALLDQ8WX93 1383 aa16.72■□□□□ 0.27
ATRIP-204ENST00000412052 IFIT1P09914 478 aaKnown RBP16.71■□□□□ 0.27
ATRIP-204ENST00000412052 FDPSP14324 419 aaKnown RBP16.71■□□□□ 0.27
ATRIP-204ENST00000412052 ZSCAN16Q9H4T2 348 aaPredicted RBP16.71■□□□□ 0.27
ATRIP-204ENST00000412052 CFAP45Q9UL16 551 aa16.71■□□□□ 0.27
ATRIP-204ENST00000412052 SPDYE4A6NLX3 237 aa16.71■□□□□ 0.27
ATRIP-204ENST00000412052 FOXP2O15409 715 aa16.71■□□□□ 0.27
ATRIP-204ENST00000412052 ME1P48163 572 aa16.71■□□□□ 0.27
ATRIP-204ENST00000412052 SCARF1Q14162 830 aa16.71■□□□□ 0.27
ATRIP-204ENST00000412052 TPM3P06753 285 aa16.7■□□□□ 0.26
ATRIP-204ENST00000412052 PDIA4P13667 645 aaKnown RBP16.7■□□□□ 0.26
ATRIP-204ENST00000412052 FSIP1Q8NA03 581 aa16.7■□□□□ 0.26
ATRIP-204ENST00000412052 ALS2Q96Q42 1657 aa16.7■□□□□ 0.26
ATRIP-204ENST00000412052 RCOR1Q9UKL0 485 aa16.7■□□□□ 0.26
ATRIP-204ENST00000412052 DENND2AQ9ULE3 1009 aa16.7■□□□□ 0.26
ATRIP-204ENST00000412052 SALL1Q9NSC2 1324 aa16.7■□□□□ 0.26
ATRIP-204ENST00000412052 MTERF4Q7Z6M4 381 aaKnown RBP16.7■□□□□ 0.26
ATRIP-204ENST00000412052 CWC25Q9NXE8 425 aaPredicted RBP16.7■□□□□ 0.26
ATRIP-204ENST00000412052 RFX7Q2KHR2 1363 aa16.7■□□□□ 0.26
ATRIP-204ENST00000412052 A0A1B0GVL5 298 aa16.69■□□□□ 0.26
ATRIP-204ENST00000412052 CHAF1AQ13111 956 aaPredicted RBP16.69■□□□□ 0.26
ATRIP-204ENST00000412052 NKX2-3Q8TAU0 364 aa16.69■□□□□ 0.26
ATRIP-204ENST00000412052 LMTK3Q96Q04 1460 aa16.69■□□□□ 0.26
ATRIP-204ENST00000412052 POLR3DP05423 398 aaPredicted RBP16.69■□□□□ 0.26
ATRIP-204ENST00000412052 NAA16Q6N069 864 aaPredicted RBP16.69■□□□□ 0.26
ATRIP-204ENST00000412052 DSCC1Q9BVC3 393 aa16.69■□□□□ 0.26
ATRIP-204ENST00000412052 C19orf44Q9H6X5 657 aa16.69■□□□□ 0.26
ATRIP-204ENST00000412052 HELLSQ9NRZ9 838 aa16.69■□□□□ 0.26
ATRIP-204ENST00000412052 ZNF142P52746 1687 aaPredicted RBP16.69■□□□□ 0.26
ATRIP-204ENST00000412052 CARMIL3Q8ND23 1372 aa16.69■□□□□ 0.26
ATRIP-204ENST00000412052 MYH15Q9Y2K3 1946 aa16.69■□□□□ 0.26
ATRIP-204ENST00000412052 GOLGA6L19H0YKK7 550 aa16.69■□□□□ 0.26
ATRIP-204ENST00000412052 EYA2O00167 538 aa16.69■□□□□ 0.26
ATRIP-204ENST00000412052 FILIP1Q7Z7B0 1213 aa16.69■□□□□ 0.26
ATRIP-204ENST00000412052 DHX40Q8IX18 779 aaKnown RBP16.69■□□□□ 0.26
ATRIP-204ENST00000412052 ENGASEQ8NFI3 743 aa16.69■□□□□ 0.26
ATRIP-204ENST00000412052 ZNF592Q92610 1267 aa16.69■□□□□ 0.26
ATRIP-204ENST00000412052 LLPHQ9BRT6 129 aaKnown RBP16.69■□□□□ 0.26
ATRIP-204ENST00000412052 RNF113AO15541 343 aaKnown RBP16.68■□□□□ 0.26
ATRIP-204ENST00000412052 TNNT1P13805 278 aa16.68■□□□□ 0.26
ATRIP-204ENST00000412052 U2AF2P26368 475 aaKnown RBP eCLIP16.68■□□□□ 0.26
ATRIP-204ENST00000412052 CCDC73Q6ZRK6 1079 aa16.68■□□□□ 0.26
ATRIP-204ENST00000412052 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.68■□□□□ 0.26
ATRIP-204ENST00000412052 COL18A1P39060 1754 aa16.68■□□□□ 0.26
ATRIP-204ENST00000412052 WASHC4Q2M389 1173 aa16.68■□□□□ 0.26
ATRIP-204ENST00000412052 SYNE4Q8N205 404 aa16.68■□□□□ 0.26
ATRIP-204ENST00000412052 AOPEPQ8N6M6 819 aa16.68■□□□□ 0.26
ATRIP-204ENST00000412052 AGXT2Q9BYV1 514 aa16.68■□□□□ 0.26
ATRIP-204ENST00000412052 PCDHA7Q9UN72 937 aa16.68■□□□□ 0.26
ATRIP-204ENST00000412052 CLIC4Q9Y696 253 aa16.68■□□□□ 0.26
ATRIP-204ENST00000412052 STX1AQ16623 288 aa16.67■□□□□ 0.26
ATRIP-204ENST00000412052 TJP1Q07157 1748 aa16.67■□□□□ 0.26
ATRIP-204ENST00000412052 KINO60870 393 aaKnown RBP16.67■□□□□ 0.26
ATRIP-204ENST00000412052 HMGB1P09429 215 aaKnown RBP16.67■□□□□ 0.26
ATRIP-204ENST00000412052 IL15P40933 162 aaPredicted RBP16.67■□□□□ 0.26
ATRIP-204ENST00000412052 KLHL34Q8N239 644 aa16.67■□□□□ 0.26
ATRIP-204ENST00000412052 TPD52L1Q16890 204 aaPredicted RBP16.66■□□□□ 0.26
ATRIP-204ENST00000412052 PDCL2Q8N4E4 241 aa16.66■□□□□ 0.26
ATRIP-204ENST00000412052 BIN1O00499 593 aa16.66■□□□□ 0.26
ATRIP-204ENST00000412052 NDUFA8P51970 172 aa16.66■□□□□ 0.26
ATRIP-204ENST00000412052 NCBP1Q09161 790 aaKnown RBP16.66■□□□□ 0.26
ATRIP-204ENST00000412052 LRRC8AQ8IWT6 810 aa16.66■□□□□ 0.26
ATRIP-204ENST00000412052 PUS7LQ9H0K6 701 aaKnown RBP16.66■□□□□ 0.26
ATRIP-204ENST00000412052 TRMT1Q9NXH9 659 aaKnown RBP16.66■□□□□ 0.26
ATRIP-204ENST00000412052 PRDM4Q9UKN5 801 aa16.66■□□□□ 0.26
ATRIP-204ENST00000412052 BECN2A8MW95 431 aa16.65■□□□□ 0.26
ATRIP-204ENST00000412052 CTIFO43310 598 aaKnown RBP16.65■□□□□ 0.26
ATRIP-204ENST00000412052 ATF3P18847 181 aa16.65■□□□□ 0.26
ATRIP-204ENST00000412052 FAM160A1Q05DH4 1040 aa16.65■□□□□ 0.26
ATRIP-204ENST00000412052 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.65■□□□□ 0.26
ATRIP-204ENST00000412052 KIF1AQ12756 1690 aa16.65■□□□□ 0.26
ATRIP-204ENST00000412052 AIFM3Q96NN9 605 aa16.65■□□□□ 0.26
ATRIP-204ENST00000412052 MST1RQ04912 1400 aa16.65■□□□□ 0.26
ATRIP-204ENST00000412052 NWD2Q9ULI1 1742 aa16.64■□□□□ 0.26
ATRIP-204ENST00000412052 KIF28PB7ZC32 967 aa16.64■□□□□ 0.25
ATRIP-204ENST00000412052 RXRAP19793 462 aa16.64■□□□□ 0.25
ATRIP-204ENST00000412052 ZAP70P43403 619 aa16.64■□□□□ 0.25
ATRIP-204ENST00000412052 ISM2Q6H9L7 571 aa16.64■□□□□ 0.25
ATRIP-204ENST00000412052 ANKRD7Q92527 254 aa16.64■□□□□ 0.25
ATRIP-204ENST00000412052 SYTL4Q96C24 671 aaPredicted RBP16.64■□□□□ 0.25
ATRIP-204ENST00000412052 FAM89AQ96GI7 184 aa16.64■□□□□ 0.25
ATRIP-204ENST00000412052 TMEM94Q12767 1356 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms