RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 MAPKAPK5Q8IW41 473 aa13.43□□□□□ -0.26
SNX13-202ENST00000409604 CAVIN1Q6NZI2 390 aaKnown RBP13.43□□□□□ -0.26
SNX13-202ENST00000409604 SDR42E1Q8WUS8 393 aa13.43□□□□□ -0.26
SNX13-202ENST00000409604 SPATA31A6Q5VVP1 1343 aa13.43□□□□□ -0.26
SNX13-202ENST00000409604 IBSPP21815 317 aaPredicted RBP13.42□□□□□ -0.26
SNX13-202ENST00000409604 MFSD14BQ5SR56 506 aa13.42□□□□□ -0.26
SNX13-202ENST00000409604 TTLL11Q8NHH1 800 aa13.42□□□□□ -0.26
SNX13-202ENST00000409604 LPIN2Q92539 896 aa13.42□□□□□ -0.26
SNX13-202ENST00000409604 CRNKL1Q9BZJ0 848 aaKnown RBP13.42□□□□□ -0.26
SNX13-202ENST00000409604 SLC12A7Q9Y666 1083 aa13.42□□□□□ -0.26
SNX13-202ENST00000409604 ARHGAP23Q9P227 1491 aa13.42□□□□□ -0.26
SNX13-202ENST00000409604 RAD17O75943 681 aa13.42□□□□□ -0.26
SNX13-202ENST00000409604 NUCB2P80303 420 aa13.42□□□□□ -0.26
SNX13-202ENST00000409604 SDF4Q9BRK5 362 aa13.42□□□□□ -0.26
SNX13-202ENST00000409604 PTPN12Q05209 780 aaKnown RBP13.42□□□□□ -0.26
SNX13-202ENST00000409604 KLF18A0A0U1RQI7 1052 aa13.41□□□□□ -0.26
SNX13-202ENST00000409604 NFIXQ14938 502 aa13.41□□□□□ -0.26
SNX13-202ENST00000409604 PANK2Q9BZ23 570 aa13.41□□□□□ -0.26
SNX13-202ENST00000409604 ANKRD2Q9GZV1 360 aa13.41□□□□□ -0.26
SNX13-202ENST00000409604 MEGF6O75095 1541 aa13.41□□□□□ -0.26
SNX13-202ENST00000409604 SASH1O94885 1247 aa13.41□□□□□ -0.26
SNX13-202ENST00000409604 ME1P48163 572 aa13.41□□□□□ -0.26
SNX13-202ENST00000409604 KRT32Q14532 448 aa13.41□□□□□ -0.26
SNX13-202ENST00000409604 SPATA5Q8NB90 893 aa13.41□□□□□ -0.26
SNX13-202ENST00000409604 ZNF532Q9HCE3 1301 aa13.41□□□□□ -0.26
SNX13-202ENST00000409604 IQGAP1P46940 1657 aa13.41□□□□□ -0.26
SNX13-202ENST00000409604 GPAA1O43292 621 aa13.41□□□□□ -0.26
SNX13-202ENST00000409604 HMGB2P26583 209 aaKnown RBP13.41□□□□□ -0.26
SNX13-202ENST00000409604 PDE4CQ08493 712 aa13.41□□□□□ -0.26
SNX13-202ENST00000409604 MYL10Q9BUA6 226 aa13.41□□□□□ -0.26
SNX13-202ENST00000409604 CHGBP05060 677 aa13.41□□□□□ -0.26
SNX13-202ENST00000409604 DHX8Q14562 1220 aaKnown RBP13.41□□□□□ -0.26
SNX13-202ENST00000409604 STK38Q15208 465 aa13.41□□□□□ -0.26
SNX13-202ENST00000409604 TEX11Q8IYF3 940 aa13.41□□□□□ -0.26
SNX13-202ENST00000409604 A0A0D9SFI3 127 aa13.4□□□□□ -0.26
SNX13-202ENST00000409604 hCG_1642624A0A1W2PR95 340 aa13.4□□□□□ -0.26
SNX13-202ENST00000409604 B4E1Z4 1266 aa13.4□□□□□ -0.26
SNX13-202ENST00000409604 PDE8BO95263 885 aa13.4□□□□□ -0.26
SNX13-202ENST00000409604 CTDSPL2Q05D32 466 aa13.4□□□□□ -0.26
SNX13-202ENST00000409604 SPTY2D1Q68D10 685 aaPredicted RBP13.4□□□□□ -0.26
SNX13-202ENST00000409604 TBC1D32Q96NH3 1257 aa13.4□□□□□ -0.26
SNX13-202ENST00000409604 RNF123Q5XPI4 1314 aa13.4□□□□□ -0.26
SNX13-202ENST00000409604 KDM2BQ8NHM5 1336 aa13.4□□□□□ -0.26
SNX13-202ENST00000409604 GOLGA8AA7E2F4 631 aa13.4□□□□□ -0.26
SNX13-202ENST00000409604 SLIT1O75093 1534 aa13.4□□□□□ -0.26
SNX13-202ENST00000409604 SSFA2P28290 1259 aa13.4□□□□□ -0.26
SNX13-202ENST00000409604 APOBRQ0VD83 1088 aa13.4□□□□□ -0.26
SNX13-202ENST00000409604 UIMC1Q96RL1 719 aa13.4□□□□□ -0.26
SNX13-202ENST00000409604 SCAF8Q9UPN6 1271 aaKnown RBP13.4□□□□□ -0.26
SNX13-202ENST00000409604 LAMC1P11047 1609 aa13.4□□□□□ -0.26
SNX13-202ENST00000409604 XBP1P17861 261 aa13.4□□□□□ -0.26
SNX13-202ENST00000409604 Q6ZUG5 572 aa13.4□□□□□ -0.26
SNX13-202ENST00000409604 SYAP1Q96A49 352 aaPredicted RBP13.4□□□□□ -0.26
SNX13-202ENST00000409604 TTF2Q9UNY4 1162 aaKnown RBP13.4□□□□□ -0.26
SNX13-202ENST00000409604 TSPY3P0CV98 308 aa13.39□□□□□ -0.27
SNX13-202ENST00000409604 TSPY8P0CW00 308 aa13.39□□□□□ -0.27
SNX13-202ENST00000409604 CTCFLQ8NI51 663 aaPredicted RBP13.39□□□□□ -0.27
SNX13-202ENST00000409604 TGFBRAP1Q8WUH2 860 aa13.39□□□□□ -0.27
SNX13-202ENST00000409604 A0A0G2JLW4 131 aa13.39□□□□□ -0.27
SNX13-202ENST00000409604 GOLGA6L3A6NEY3 463 aa13.39□□□□□ -0.27
SNX13-202ENST00000409604 SSBP05455 408 aaKnown RBP eCLIP13.39□□□□□ -0.27
SNX13-202ENST00000409604 RAB3GAP1Q15042 981 aa13.39□□□□□ -0.27
SNX13-202ENST00000409604 DIXDC1Q155Q3 683 aa13.39□□□□□ -0.27
SNX13-202ENST00000409604 CREB3L3Q68CJ9 461 aa13.39□□□□□ -0.27
SNX13-202ENST00000409604 ZHX3Q9H4I2 956 aa13.39□□□□□ -0.27
SNX13-202ENST00000409604 MYO1BO43795 1136 aa13.38□□□□□ -0.27
SNX13-202ENST00000409604 ANKRD1Q15327 319 aa13.38□□□□□ -0.27
SNX13-202ENST00000409604 EAPPQ56P03 285 aaPredicted RBP13.38□□□□□ -0.27
SNX13-202ENST00000409604 SOGA3Q5TF21 947 aa13.38□□□□□ -0.27
SNX13-202ENST00000409604 SLC26A6Q9BXS9 759 aa13.38□□□□□ -0.27
SNX13-202ENST00000409604 COL15A1P39059 1388 aa13.38□□□□□ -0.27
SNX13-202ENST00000409604 TTC41PQ6P2S7 1318 aa13.38□□□□□ -0.27
SNX13-202ENST00000409604 ZGPATQ8N5A5 531 aaKnown RBP13.38□□□□□ -0.27
SNX13-202ENST00000409604 NCOA7Q8NI08 942 aa13.38□□□□□ -0.27
SNX13-202ENST00000409604 NCOA5Q9HCD5 579 aaKnown RBP13.38□□□□□ -0.27
SNX13-202ENST00000409604 LIMCH1Q9UPQ0 1083 aa13.38□□□□□ -0.27
SNX13-202ENST00000409604 CLRN2A0PK11 232 aa13.38□□□□□ -0.27
SNX13-202ENST00000409604 CCDC43Q96MW1 224 aaKnown RBP13.38□□□□□ -0.27
SNX13-202ENST00000409604 EYA3Q99504 573 aa13.38□□□□□ -0.27
SNX13-202ENST00000409604 BRMS1Q9HCU9 246 aa13.38□□□□□ -0.27
SNX13-202ENST00000409604 NARFQ9UHQ1 456 aa13.38□□□□□ -0.27
SNX13-202ENST00000409604 DDX11L8A8MPP1 907 aa13.37□□□□□ -0.27
SNX13-202ENST00000409604 BECN2A8MW95 431 aa13.37□□□□□ -0.27
SNX13-202ENST00000409604 PDE6BP35913 854 aa13.37□□□□□ -0.27
SNX13-202ENST00000409604 PTH1RQ03431 593 aa13.37□□□□□ -0.27
SNX13-202ENST00000409604 ADCY9O60503 1353 aa13.37□□□□□ -0.27
SNX13-202ENST00000409604 ZNF804BA4D1E1 1349 aa13.37□□□□□ -0.27
SNX13-202ENST00000409604 CACNB3P54284 484 aa13.37□□□□□ -0.27
SNX13-202ENST00000409604 PDE4BQ07343 736 aa13.37□□□□□ -0.27
SNX13-202ENST00000409604 TPD52L1Q16890 204 aaPredicted RBP13.37□□□□□ -0.27
SNX13-202ENST00000409604 CSPP1Q1MSJ5 1256 aa13.37□□□□□ -0.27
SNX13-202ENST00000409604 OLFM4Q6UX06 510 aa13.37□□□□□ -0.27
SNX13-202ENST00000409604 CCDC73Q6ZRK6 1079 aa13.37□□□□□ -0.27
SNX13-202ENST00000409604 TMX3Q96JJ7 454 aa13.37□□□□□ -0.27
SNX13-202ENST00000409604 ERBB4Q15303 1308 aa13.37□□□□□ -0.27
SNX13-202ENST00000409604 PRC1O43663 620 aa13.37□□□□□ -0.27
SNX13-202ENST00000409604 MCM2P49736 904 aa13.37□□□□□ -0.27
SNX13-202ENST00000409604 SLF2Q8IX21 1173 aa13.37□□□□□ -0.27
SNX13-202ENST00000409604 VSIG10Q8N0Z9 540 aa13.37□□□□□ -0.27
SNX13-202ENST00000409604 KBTBD3Q8NAB2 608 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms