RNA–Protein interactions for RNA: ENST00000399367.7

ITSN1-212, Transcript of intersectin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ITSN1, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-212ENST00000399367 PRDM10Q9NQV6 1147 aa17.06■□□□□ 0.32
ITSN1-212ENST00000399367 RNF113AO15541 343 aaKnown RBP17.05■□□□□ 0.32
ITSN1-212ENST00000399367 BMP15O95972 392 aa17.05■□□□□ 0.32
ITSN1-212ENST00000399367 ESYT1Q9BSJ8 1104 aa17.05■□□□□ 0.32
ITSN1-212ENST00000399367 GPATCH8Q9UKJ3 1502 aaKnown RBP17.05■□□□□ 0.32
ITSN1-212ENST00000399367 NCBP1Q09161 790 aaKnown RBP17.05■□□□□ 0.32
ITSN1-212ENST00000399367 RAB3GAP1Q15042 981 aa17.05■□□□□ 0.32
ITSN1-212ENST00000399367 GNAT2P19087 354 aa17.05■□□□□ 0.32
ITSN1-212ENST00000399367 MRVI1Q9Y6F6 885 aa17.05■□□□□ 0.32
ITSN1-212ENST00000399367 PABPN1LA6NDY0 278 aaKnown RBP17.05■□□□□ 0.32
ITSN1-212ENST00000399367 GCOM1H8Y6P7 765 aaPredicted RBP17.05■□□□□ 0.32
ITSN1-212ENST00000399367 UFL1O94874 794 aa17.05■□□□□ 0.32
ITSN1-212ENST00000399367 MYZAPP0CAP1 466 aa17.05■□□□□ 0.32
ITSN1-212ENST00000399367 UBE2HP62256 183 aa17.05■□□□□ 0.32
ITSN1-212ENST00000399367 TSPYL6Q8N831 410 aa17.05■□□□□ 0.32
ITSN1-212ENST00000399367 SAP30BPQ9UHR5 308 aaKnown RBP17.05■□□□□ 0.32
ITSN1-212ENST00000399367 RNMTO43148 476 aaKnown RBP17.05■□□□□ 0.32
ITSN1-212ENST00000399367 HOXC9P31274 260 aa17.05■□□□□ 0.32
ITSN1-212ENST00000399367 GIMAP6Q6P9H5 292 aa17.04■□□□□ 0.32
ITSN1-212ENST00000399367 NAA15Q9BXJ9 866 aaKnown RBP17.04■□□□□ 0.32
ITSN1-212ENST00000399367 ZSCAN22P10073 491 aaPredicted RBP17.04■□□□□ 0.32
ITSN1-212ENST00000399367 RXRAP19793 462 aa17.04■□□□□ 0.32
ITSN1-212ENST00000399367 THOC2Q8NI27 1593 aaKnown RBP17.04■□□□□ 0.32
ITSN1-212ENST00000399367 BACH1O14867 736 aa17.04■□□□□ 0.32
ITSN1-212ENST00000399367 CCDC172P0C7W6 258 aa17.04■□□□□ 0.32
ITSN1-212ENST00000399367 HCLS1P14317 486 aaPredicted RBP17.04■□□□□ 0.32
ITSN1-212ENST00000399367 IMPG2Q9BZV3 1241 aa17.04■□□□□ 0.32
ITSN1-212ENST00000399367 HOMER2Q9NSB8 354 aa17.04■□□□□ 0.32
ITSN1-212ENST00000399367 MAP3K5Q99683 1374 aa17.04■□□□□ 0.32
ITSN1-212ENST00000399367 GSDMDP57764 484 aa17.04■□□□□ 0.32
ITSN1-212ENST00000399367 PCDHB15Q9Y5E8 787 aa17.04■□□□□ 0.32
ITSN1-212ENST00000399367 MAPK8IP2Q13387 824 aaPredicted RBP17.03■□□□□ 0.32
ITSN1-212ENST00000399367 DHX58Q96C10 678 aa17.03■□□□□ 0.32
ITSN1-212ENST00000399367 HDAC1Q13547 482 aaPredicted RBP17.03■□□□□ 0.32
ITSN1-212ENST00000399367 FAM98CQ17RN3 349 aaKnown RBP17.03■□□□□ 0.32
ITSN1-212ENST00000399367 PKD2L1Q9P0L9 805 aa17.03■□□□□ 0.32
ITSN1-212ENST00000399367 KRT79Q5XKE5 535 aa17.03■□□□□ 0.32
ITSN1-212ENST00000399367 ZKSCAN3Q9BRR0 538 aa17.03■□□□□ 0.32
ITSN1-212ENST00000399367 RALGAPBQ86X10 1494 aa17.03■□□□□ 0.32
ITSN1-212ENST00000399367 ADCY5O95622 1261 aa17.03■□□□□ 0.32
ITSN1-212ENST00000399367 KCNG4Q8TDN1 519 aa17.03■□□□□ 0.32
ITSN1-212ENST00000399367 BICC1Q9H694 974 aaKnown RBP17.03■□□□□ 0.32
ITSN1-212ENST00000399367 MCM3P25205 808 aa17.02■□□□□ 0.32
ITSN1-212ENST00000399367 ZSWIM4Q9H7M6 989 aa17.02■□□□□ 0.32
ITSN1-212ENST00000399367 TRIM75PA6NK02 468 aa17.02■□□□□ 0.32
ITSN1-212ENST00000399367 CCDC24Q8N4L8 307 aa17.02■□□□□ 0.32
ITSN1-212ENST00000399367 IP6K1Q92551 441 aa17.02■□□□□ 0.32
ITSN1-212ENST00000399367 PHACTR3Q96KR7 559 aa17.02■□□□□ 0.32
ITSN1-212ENST00000399367 FSD2A1L4K1 749 aa17.02■□□□□ 0.31
ITSN1-212ENST00000399367 FAM13AO94988 1023 aa17.01■□□□□ 0.31
ITSN1-212ENST00000399367 TTC6Q86TZ1 520 aa17.01■□□□□ 0.31
ITSN1-212ENST00000399367 TEX11Q8IYF3 940 aa17.01■□□□□ 0.31
ITSN1-212ENST00000399367 CNPY2Q9Y2B0 182 aa17.01■□□□□ 0.31
ITSN1-212ENST00000399367 GJC1P36383 396 aa17.01■□□□□ 0.31
ITSN1-212ENST00000399367 ARID5AQ03989 594 aa17.01■□□□□ 0.31
ITSN1-212ENST00000399367 ORAI2Q96SN7 254 aa17.01■□□□□ 0.31
ITSN1-212ENST00000399367 STAMBPO95630 424 aa17.01■□□□□ 0.31
ITSN1-212ENST00000399367 MCM7P33993 719 aa17.01■□□□□ 0.31
ITSN1-212ENST00000399367 UBASH3AP57075 661 aa17.01■□□□□ 0.31
ITSN1-212ENST00000399367 APOBRQ0VD83 1088 aa17.01■□□□□ 0.31
ITSN1-212ENST00000399367 NPATQ14207 1427 aa17.01■□□□□ 0.31
ITSN1-212ENST00000399367 ZNF518AQ6AHZ1 1483 aa17.01■□□□□ 0.31
ITSN1-212ENST00000399367 PSMA7O14818 248 aa17.01■□□□□ 0.31
ITSN1-212ENST00000399367 CALML3P27482 149 aa17.01■□□□□ 0.31
ITSN1-212ENST00000399367 SMC1AQ14683 1233 aaKnown RBP17.01■□□□□ 0.31
ITSN1-212ENST00000399367 MAP3K19Q56UN5 1328 aa17.01■□□□□ 0.31
ITSN1-212ENST00000399367 RTL9Q8NET4 1388 aa17.01■□□□□ 0.31
ITSN1-212ENST00000399367 SHTN1A0MZ66 631 aa17.01■□□□□ 0.31
ITSN1-212ENST00000399367 KIAA0753Q2KHM9 967 aa17■□□□□ 0.31
ITSN1-212ENST00000399367 PLIN2Q99541 437 aa17■□□□□ 0.31
ITSN1-212ENST00000399367 ZMYM3Q14202 1370 aa17■□□□□ 0.31
ITSN1-212ENST00000399367 PRKG1Q13976 671 aa17■□□□□ 0.31
ITSN1-212ENST00000399367 MRPS27Q92552 414 aaKnown RBP17■□□□□ 0.31
ITSN1-212ENST00000399367 MBD4O95243 580 aa17■□□□□ 0.31
ITSN1-212ENST00000399367 EIF6P56537 245 aaKnown RBP17■□□□□ 0.31
ITSN1-212ENST00000399367 SSX2IPQ9Y2D8 614 aa17■□□□□ 0.31
ITSN1-212ENST00000399367 ATP10BO94823 1461 aa17■□□□□ 0.31
ITSN1-212ENST00000399367 NEMFO60524 1076 aa17■□□□□ 0.31
ITSN1-212ENST00000399367 ITGA6P23229 1130 aa16.99■□□□□ 0.31
ITSN1-212ENST00000399367 GNG11P61952 73 aa16.99■□□□□ 0.31
ITSN1-212ENST00000399367 INCENPQ9NQS7 918 aa16.99■□□□□ 0.31
ITSN1-212ENST00000399367 PTGS1P23219 599 aa16.99■□□□□ 0.31
ITSN1-212ENST00000399367 KRT2P35908 639 aa16.99■□□□□ 0.31
ITSN1-212ENST00000399367 ZYXQ15942 572 aaKnown RBP16.99■□□□□ 0.31
ITSN1-212ENST00000399367 TAF12Q16514 161 aa16.99■□□□□ 0.31
ITSN1-212ENST00000399367 PICK1Q9NRD5 415 aa16.99■□□□□ 0.31
ITSN1-212ENST00000399367 IKBKGQ9Y6K9 419 aa16.99■□□□□ 0.31
ITSN1-212ENST00000399367 TIMM10P62072 90 aa16.99■□□□□ 0.31
ITSN1-212ENST00000399367 DENND2AQ9ULE3 1009 aa16.99■□□□□ 0.31
ITSN1-212ENST00000399367 GNA11P29992 359 aa16.99■□□□□ 0.31
ITSN1-212ENST00000399367 IFI16Q16666 785 aaKnown RBP16.99■□□□□ 0.31
ITSN1-212ENST00000399367 MAATS1Q7Z4T9 603 aa16.99■□□□□ 0.31
ITSN1-212ENST00000399367 TSNARE1Q96NA8 513 aa16.99■□□□□ 0.31
ITSN1-212ENST00000399367 TBC1D32Q96NH3 1257 aa16.99■□□□□ 0.31
ITSN1-212ENST00000399367 GPCPD1Q9NPB8 672 aa16.98■□□□□ 0.31
ITSN1-212ENST00000399367 TNNQ9UQP3 1299 aa16.98■□□□□ 0.31
ITSN1-212ENST00000399367 VAMP4O75379 141 aa16.98■□□□□ 0.31
ITSN1-212ENST00000399367 HIBADHP31937 336 aaKnown RBP16.98■□□□□ 0.31
ITSN1-212ENST00000399367 PRIM1P49642 420 aaKnown RBP16.98■□□□□ 0.31
ITSN1-212ENST00000399367 SH3TC1Q8TE82 1336 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms