RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 NR1I2O75469 434 aa5.87□□□□□ -1.47
SSR1-202ENST00000397511 ATF3P18847 181 aa5.87□□□□□ -1.47
SSR1-202ENST00000397511 RPS6KB1P23443 525 aa5.87□□□□□ -1.47
SSR1-202ENST00000397511 PSMA5P28066 241 aa5.87□□□□□ -1.47
SSR1-202ENST00000397511 APOBRQ0VD83 1088 aa5.87□□□□□ -1.47
SSR1-202ENST00000397511 TTLL5Q6EMB2 1281 aa5.87□□□□□ -1.47
SSR1-202ENST00000397511 IFNL2Q8IZJ0 200 aa5.87□□□□□ -1.47
SSR1-202ENST00000397511 CHMP4CQ96CF2 233 aa5.87□□□□□ -1.47
SSR1-202ENST00000397511 NEK1Q96PY6 1258 aa5.87□□□□□ -1.47
SSR1-202ENST00000397511 MYCBPQ99417 103 aaPredicted RBP5.87□□□□□ -1.47
SSR1-202ENST00000397511 NFAT5O94916 1531 aa5.87□□□□□ -1.47
SSR1-202ENST00000397511 RGPD5Q99666 1765 aa5.87□□□□□ -1.47
SSR1-202ENST00000397511 SNRPA1P09661 255 aaKnown RBP5.87□□□□□ -1.47
SSR1-202ENST00000397511 TXLNBQ8N3L3 684 aa5.87□□□□□ -1.47
SSR1-202ENST00000397511 C16orf45Q96MC5 204 aaPredicted RBP5.87□□□□□ -1.47
SSR1-202ENST00000397511 PUS3Q9BZE2 481 aaKnown RBP5.87□□□□□ -1.47
SSR1-202ENST00000397511 TNMDQ9H2S6 317 aa5.87□□□□□ -1.47
SSR1-202ENST00000397511 GPHNQ9NQX3 736 aaPredicted RBP5.87□□□□□ -1.47
SSR1-202ENST00000397511 LOC102724159A0A0B4J2E5 919 aa5.87□□□□□ -1.47
SSR1-202ENST00000397511 DHX16O60231 1041 aaKnown RBP5.87□□□□□ -1.47
SSR1-202ENST00000397511 NOP2P46087 812 aaKnown RBP5.87□□□□□ -1.47
SSR1-202ENST00000397511 HSPA2P54652 639 aa5.87□□□□□ -1.47
SSR1-202ENST00000397511 BMS1Q14692 1282 aaKnown RBP5.87□□□□□ -1.47
SSR1-202ENST00000397511 PWP2Q15269 919 aaKnown RBP5.87□□□□□ -1.47
SSR1-202ENST00000397511 KMT5BQ4FZB7 885 aa5.87□□□□□ -1.47
SSR1-202ENST00000397511 ANO6Q4KMQ2 910 aa5.87□□□□□ -1.47
SSR1-202ENST00000397511 OTUD7BQ6GQQ9 843 aa5.87□□□□□ -1.47
SSR1-202ENST00000397511 PI16Q6UXB8 463 aa5.87□□□□□ -1.47
SSR1-202ENST00000397511 TOM1L2Q6ZVM7 507 aa5.87□□□□□ -1.47
SSR1-202ENST00000397511 STK11IPQ8N1F8 1099 aa5.87□□□□□ -1.47
SSR1-202ENST00000397511 SYNE4Q8N205 404 aa5.87□□□□□ -1.47
SSR1-202ENST00000397511 GOLGA6L1Q8N7Z2 621 aa5.87□□□□□ -1.47
SSR1-202ENST00000397511 ZSCAN31Q96LW9 406 aaPredicted RBP5.87□□□□□ -1.47
SSR1-202ENST00000397511 SH2B1Q9NRF2 756 aaPredicted RBP5.87□□□□□ -1.47
SSR1-202ENST00000397511 GJB4Q9NTQ9 266 aa5.87□□□□□ -1.47
SSR1-202ENST00000397511 NRBP1Q9UHY1 535 aa5.87□□□□□ -1.47
SSR1-202ENST00000397511 NAA30Q147X3 362 aaPredicted RBP5.86□□□□□ -1.47
SSR1-202ENST00000397511 MUM1L1Q5H9M0 696 aa5.86□□□□□ -1.47
SSR1-202ENST00000397511 ICE2Q659A1 982 aa5.86□□□□□ -1.47
SSR1-202ENST00000397511 STOX1Q6ZVD7 989 aa5.86□□□□□ -1.47
SSR1-202ENST00000397511 NUP62CLQ9H1M0 184 aa5.86□□□□□ -1.47
SSR1-202ENST00000397511 DNAJC25Q9H1X3 360 aa5.86□□□□□ -1.47
SSR1-202ENST00000397511 BRMS1Q9HCU9 246 aa5.86□□□□□ -1.47
SSR1-202ENST00000397511 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.86□□□□□ -1.47
SSR1-202ENST00000397511 KDM6AO15550 1401 aaPredicted RBP5.86□□□□□ -1.47
SSR1-202ENST00000397511 CCDC192P0DO97 292 aa5.86□□□□□ -1.47
SSR1-202ENST00000397511 DSG3P32926 999 aa5.86□□□□□ -1.47
SSR1-202ENST00000397511 SCRN1Q12765 414 aa5.86□□□□□ -1.47
SSR1-202ENST00000397511 LRMPQ12912 555 aa5.86□□□□□ -1.47
SSR1-202ENST00000397511 WASHC4Q2M389 1173 aa5.86□□□□□ -1.47
SSR1-202ENST00000397511 GORABQ5T7V8 394 aa5.86□□□□□ -1.47
SSR1-202ENST00000397511 FMNL2Q96PY5 1086 aa5.86□□□□□ -1.47
SSR1-202ENST00000397511 NCAPGQ9BPX3 1015 aa5.86□□□□□ -1.47
SSR1-202ENST00000397511 CWC15Q9P013 229 aaKnown RBP5.86□□□□□ -1.47
SSR1-202ENST00000397511 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.86□□□□□ -1.47
SSR1-202ENST00000397511 USP42Q9H9J4 1324 aaKnown RBP5.86□□□□□ -1.47
SSR1-202ENST00000397511 ADGRL3Q9HAR2 1447 aa5.86□□□□□ -1.47
SSR1-202ENST00000397511 NBPF26B4DH59 902 aa5.86□□□□□ -1.47
SSR1-202ENST00000397511 HIP1O00291 1037 aa5.86□□□□□ -1.47
SSR1-202ENST00000397511 MYCNP04198 464 aaPredicted RBP5.86□□□□□ -1.47
SSR1-202ENST00000397511 PTGS1P23219 599 aa5.86□□□□□ -1.47
SSR1-202ENST00000397511 CASQ1P31415 396 aa5.86□□□□□ -1.47
SSR1-202ENST00000397511 MAP3K11Q16584 847 aa5.86□□□□□ -1.47
SSR1-202ENST00000397511 TPD52L1Q16890 204 aaPredicted RBP5.86□□□□□ -1.47
SSR1-202ENST00000397511 NBPF14Q5TI25 921 aa5.86□□□□□ -1.47
SSR1-202ENST00000397511 NBPF10Q6P3W6 841 aaKnown RBP5.86□□□□□ -1.47
SSR1-202ENST00000397511 NBPF15Q8N660 670 aa5.86□□□□□ -1.47
SSR1-202ENST00000397511 FAM89AQ96GI7 184 aa5.86□□□□□ -1.47
SSR1-202ENST00000397511 TRIM5Q9C035 493 aa5.86□□□□□ -1.47
SSR1-202ENST00000397511 ZNF609O15014 1411 aa5.85□□□□□ -1.47
SSR1-202ENST00000397511 NPHP4O75161 1426 aaPredicted RBP5.85□□□□□ -1.47
SSR1-202ENST00000397511 MEGF6O75095 1541 aa5.85□□□□□ -1.47
SSR1-202ENST00000397511 KDM3BQ7LBC6 1761 aa5.85□□□□□ -1.47
SSR1-202ENST00000397511 POLR3DP05423 398 aaPredicted RBP5.85□□□□□ -1.47
SSR1-202ENST00000397511 RXRAP19793 462 aa5.85□□□□□ -1.47
SSR1-202ENST00000397511 GPTP24298 496 aa5.85□□□□□ -1.47
SSR1-202ENST00000397511 RFX5P48382 616 aaPredicted RBP5.85□□□□□ -1.47
SSR1-202ENST00000397511 TPM4P67936 248 aa5.85□□□□□ -1.47
SSR1-202ENST00000397511 RBM6P78332 1123 aaKnown RBP5.85□□□□□ -1.47
SSR1-202ENST00000397511 TYRO3Q06418 890 aa5.85□□□□□ -1.47
SSR1-202ENST00000397511 GPS2Q13227 327 aa5.85□□□□□ -1.47
SSR1-202ENST00000397511 MCMDC2Q4G0Z9 681 aa5.85□□□□□ -1.47
SSR1-202ENST00000397511 ISM2Q6H9L7 571 aa5.85□□□□□ -1.47
SSR1-202ENST00000397511 LEO1Q8WVC0 666 aaPredicted RBP5.85□□□□□ -1.47
SSR1-202ENST00000397511 ERO1AQ96HE7 468 aa5.85□□□□□ -1.47
SSR1-202ENST00000397511 PGBD1Q96JS3 809 aa5.85□□□□□ -1.47
SSR1-202ENST00000397511 TM6SF1Q9BZW5 370 aa5.85□□□□□ -1.47
SSR1-202ENST00000397511 C19orf44Q9H6X5 657 aa5.85□□□□□ -1.47
SSR1-202ENST00000397511 ST7Q9NRC1 585 aa5.85□□□□□ -1.47
SSR1-202ENST00000397511 UTRNP46939 3433 aa5.85□□□□□ -1.47
SSR1-202ENST00000397511 IFIT1P09914 478 aaKnown RBP5.85□□□□□ -1.47
SSR1-202ENST00000397511 CEP135Q66GS9 1140 aa5.85□□□□□ -1.47
SSR1-202ENST00000397511 FBXO38Q6PIJ6 1188 aa5.85□□□□□ -1.47
SSR1-202ENST00000397511 TMEM87AQ8NBN3 555 aa5.85□□□□□ -1.47
SSR1-202ENST00000397511 ZNF592Q92610 1267 aa5.85□□□□□ -1.47
SSR1-202ENST00000397511 SYTL4Q96C24 671 aaPredicted RBP5.85□□□□□ -1.47
SSR1-202ENST00000397511 PAG1Q9NWQ8 432 aa5.85□□□□□ -1.47
SSR1-202ENST00000397511 MRVI1Q9Y6F6 885 aa5.85□□□□□ -1.47
SSR1-202ENST00000397511 HEG1Q9ULI3 1381 aa5.84□□□□□ -1.47
SSR1-202ENST00000397511 A0A1B0GUL7 405 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms