RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 PPME1Q9Y570 386 aa4.19□□□□□ -1.74
SNORA40.19-201ENST00000390846 HMX2A2RU54 273 aa4.18□□□□□ -1.74
SNORA40.19-201ENST00000390846 UBAP1LF5GYI3 381 aa4.18□□□□□ -1.74
SNORA40.19-201ENST00000390846 FSCN2O14926 492 aa4.18□□□□□ -1.74
SNORA40.19-201ENST00000390846 HOXA10P31260 410 aaPredicted RBP4.18□□□□□ -1.74
SNORA40.19-201ENST00000390846 CD68P34810 354 aaPredicted RBP4.18□□□□□ -1.74
SNORA40.19-201ENST00000390846 XKR5Q6UX68 686 aa4.18□□□□□ -1.74
SNORA40.19-201ENST00000390846 DTX1Q86Y01 620 aa4.18□□□□□ -1.74
SNORA40.19-201ENST00000390846 MAP4K3Q8IVH8 894 aa4.18□□□□□ -1.74
SNORA40.19-201ENST00000390846 TRIM42Q8IWZ5 723 aa4.18□□□□□ -1.74
SNORA40.19-201ENST00000390846 GPR152Q8TDT2 470 aa4.18□□□□□ -1.74
SNORA40.19-201ENST00000390846 MKNK1Q9BUB5 465 aa4.18□□□□□ -1.74
SNORA40.19-201ENST00000390846 NRSN2Q9GZP1 204 aa4.18□□□□□ -1.74
SNORA40.19-201ENST00000390846 A6NHS1 94 aa4.17□□□□□ -1.74
SNORA40.19-201ENST00000390846 C1orf127Q8N9H9 656 aa4.17□□□□□ -1.74
SNORA40.19-201ENST00000390846 MYRFLQ96LU7 910 aa4.17□□□□□ -1.74
SNORA40.19-201ENST00000390846 LACRTQ9GZZ8 138 aa4.17□□□□□ -1.74
SNORA40.19-201ENST00000390846 DZANK1Q9NVP4 752 aa4.17□□□□□ -1.74
SNORA40.19-201ENST00000390846 STIM2Q9P246 746 aa4.17□□□□□ -1.74
SNORA40.19-201ENST00000390846 SOX13Q9UN79 622 aa4.17□□□□□ -1.74
SNORA40.19-201ENST00000390846 GHRHP01286 108 aa4.16□□□□□ -1.74
SNORA40.19-201ENST00000390846 CDC27P30260 824 aa4.16□□□□□ -1.74
SNORA40.19-201ENST00000390846 PREPP48147 710 aa4.16□□□□□ -1.74
SNORA40.19-201ENST00000390846 NFIAQ12857 509 aa4.16□□□□□ -1.74
SNORA40.19-201ENST00000390846 CEP135Q66GS9 1140 aa4.16□□□□□ -1.74
SNORA40.19-201ENST00000390846 PHLDB3Q6NSJ2 640 aa4.16□□□□□ -1.74
SNORA40.19-201ENST00000390846 VN1R5Q7Z5H4 357 aa4.16□□□□□ -1.74
SNORA40.19-201ENST00000390846 FAM20CQ8IXL6 584 aa4.16□□□□□ -1.74
SNORA40.19-201ENST00000390846 GLB1P16278 677 aa4.15□□□□□ -1.75
SNORA40.19-201ENST00000390846 GP2P55259 537 aaKnown RBP4.15□□□□□ -1.75
SNORA40.19-201ENST00000390846 HYAL2Q12891 473 aa4.15□□□□□ -1.75
SNORA40.19-201ENST00000390846 ECM1Q16610 540 aa4.15□□□□□ -1.75
SNORA40.19-201ENST00000390846 PEAR1Q5VY43 1037 aaPredicted RBP4.15□□□□□ -1.75
SNORA40.19-201ENST00000390846 RNF43Q68DV7 783 aa4.15□□□□□ -1.75
SNORA40.19-201ENST00000390846 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.15□□□□□ -1.75
SNORA40.19-201ENST00000390846 ACAD11Q709F0 780 aa4.15□□□□□ -1.75
SNORA40.19-201ENST00000390846 WFDC3Q8IUB2 231 aa4.15□□□□□ -1.75
SNORA40.19-201ENST00000390846 CACTIN-AS1Q8N1I8 211 aa4.15□□□□□ -1.75
SNORA40.19-201ENST00000390846 GATA6Q92908 595 aa4.15□□□□□ -1.75
SNORA40.19-201ENST00000390846 NUDT16Q96DE0 195 aaKnown RBP4.15□□□□□ -1.75
SNORA40.19-201ENST00000390846 FAM83CQ9BQN1 747 aa4.15□□□□□ -1.75
SNORA40.19-201ENST00000390846 KRTAP4-7Q9BYR0 210 aa4.15□□□□□ -1.75
SNORA40.19-201ENST00000390846 ELP3Q9H9T3 547 aa4.15□□□□□ -1.75
SNORA40.19-201ENST00000390846 PCMTD2Q9NV79 361 aa4.15□□□□□ -1.75
SNORA40.19-201ENST00000390846 ABI2Q9NYB9 513 aaPredicted RBP4.15□□□□□ -1.75
SNORA40.19-201ENST00000390846 KANSL3Q9P2N6 904 aa4.15□□□□□ -1.75
SNORA40.19-201ENST00000390846 ADGRE2Q9UHX3 823 aa4.15□□□□□ -1.75
SNORA40.19-201ENST00000390846 MEGF11A6BM72 1044 aa4.14□□□□□ -1.75
SNORA40.19-201ENST00000390846 TMEM88BA6NKF7 163 aa4.14□□□□□ -1.75
SNORA40.19-201ENST00000390846 SOX1O00570 391 aaPredicted RBP4.14□□□□□ -1.75
SNORA40.19-201ENST00000390846 TIAF1O95411 115 aa4.14□□□□□ -1.75
SNORA40.19-201ENST00000390846 NPR3P17342 541 aa4.14□□□□□ -1.75
SNORA40.19-201ENST00000390846 TAL1P17542 331 aaPredicted RBP4.14□□□□□ -1.75
SNORA40.19-201ENST00000390846 CDC25BP30305 580 aa4.14□□□□□ -1.75
SNORA40.19-201ENST00000390846 LCE1DQ5T752 114 aa4.14□□□□□ -1.75
SNORA40.19-201ENST00000390846 PIK3R5Q8WYR1 880 aa4.14□□□□□ -1.75
SNORA40.19-201ENST00000390846 TMPRSS13Q9BYE2 586 aa4.14□□□□□ -1.75
SNORA40.19-201ENST00000390846 MUC3BQ9H195 1237 aa4.14□□□□□ -1.75
SNORA40.19-201ENST00000390846 STOML1Q9UBI4 398 aa4.14□□□□□ -1.75
SNORA40.19-201ENST00000390846 PDGFAP04085 211 aa4.13□□□□□ -1.75
SNORA40.19-201ENST00000390846 CTSBP07858 339 aa4.13□□□□□ -1.75
SNORA40.19-201ENST00000390846 MSMPQ1L6U9 139 aa4.13□□□□□ -1.75
SNORA40.19-201ENST00000390846 UVSSAQ2YD98 709 aa4.13□□□□□ -1.75
SNORA40.19-201ENST00000390846 PDE12Q6L8Q7 609 aaKnown RBP4.13□□□□□ -1.75
SNORA40.19-201ENST00000390846 CBLL1Q75N03 491 aa4.13□□□□□ -1.75
SNORA40.19-201ENST00000390846 HOMEZQ8IX15 550 aa4.13□□□□□ -1.75
SNORA40.19-201ENST00000390846 KLHL23Q8NBE8 558 aa4.13□□□□□ -1.75
SNORA40.19-201ENST00000390846 NXPE3Q969Y0 559 aa4.13□□□□□ -1.75
SNORA40.19-201ENST00000390846 VTI1AQ96AJ9 217 aa4.13□□□□□ -1.75
SNORA40.19-201ENST00000390846 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.13□□□□□ -1.75
SNORA40.19-201ENST00000390846 H3BRJ5 948 aa4.12□□□□□ -1.75
SNORA40.19-201ENST00000390846 DHX15O43143 795 aaKnown RBP4.12□□□□□ -1.75
SNORA40.19-201ENST00000390846 COBLO75128 1261 aa4.12□□□□□ -1.75
SNORA40.19-201ENST00000390846 F13BP05160 661 aa4.12□□□□□ -1.75
SNORA40.19-201ENST00000390846 ARID4AP29374 1257 aaPredicted RBP4.12□□□□□ -1.75
SNORA40.19-201ENST00000390846 ADMP35318 185 aa4.12□□□□□ -1.75
SNORA40.19-201ENST00000390846 CLEC10AQ8IUN9 316 aa4.12□□□□□ -1.75
SNORA40.19-201ENST00000390846 SHKBP1Q8TBC3 707 aa4.12□□□□□ -1.75
SNORA40.19-201ENST00000390846 DBNDD2Q9BQY9 259 aa4.12□□□□□ -1.75
SNORA40.19-201ENST00000390846 EREGO14944 169 aa4.11□□□□□ -1.75
SNORA40.19-201ENST00000390846 PTCD1O75127 700 aaKnown RBP4.11□□□□□ -1.75
SNORA40.19-201ENST00000390846 BMP3P12645 472 aa4.11□□□□□ -1.75
SNORA40.19-201ENST00000390846 DUOXA2Q1HG44 320 aa4.11□□□□□ -1.75
SNORA40.19-201ENST00000390846 SGO2Q562F6 1265 aa4.11□□□□□ -1.75
SNORA40.19-201ENST00000390846 LCE4AQ5TA78 99 aa4.11□□□□□ -1.75
SNORA40.19-201ENST00000390846 TMEM102Q8N9M5 508 aaPredicted RBP4.11□□□□□ -1.75
SNORA40.19-201ENST00000390846 EDEM1Q92611 657 aa4.11□□□□□ -1.75
SNORA40.19-201ENST00000390846 WNT8BQ93098 351 aa4.11□□□□□ -1.75
SNORA40.19-201ENST00000390846 UTP4Q969X6 686 aaKnown RBP4.11□□□□□ -1.75
SNORA40.19-201ENST00000390846 ZKSCAN3Q9BRR0 538 aa4.11□□□□□ -1.75
SNORA40.19-201ENST00000390846 OSGEPQ9NPF4 335 aa4.11□□□□□ -1.75
SNORA40.19-201ENST00000390846 SEC31BQ9NQW1 1179 aa4.11□□□□□ -1.75
SNORA40.19-201ENST00000390846 LATS2Q9NRM7 1088 aa4.11□□□□□ -1.75
SNORA40.19-201ENST00000390846 LOC100289279A0A1B0GTE1 492 aa4.1□□□□□ -1.75
SNORA40.19-201ENST00000390846 SUPT5HO00267 1087 aaKnown RBP4.1□□□□□ -1.75
SNORA40.19-201ENST00000390846 PDE2AO00408 941 aaPredicted RBP4.1□□□□□ -1.75
SNORA40.19-201ENST00000390846 FZD6O60353 706 aa4.1□□□□□ -1.75
SNORA40.19-201ENST00000390846 SMNDC1O75940 238 aaKnown RBP eCLIP4.1□□□□□ -1.75
SNORA40.19-201ENST00000390846 PIP4K2BP78356 416 aa4.1□□□□□ -1.75
SNORA40.19-201ENST00000390846 MTMR3Q13615 1198 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms