RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 NCAPD2Q15021 1401 aa15.15■□□□□ 0.02
USP11-204ENST00000377107 NPHP1O15259 732 aa15.15■□□□□ 0.02
USP11-204ENST00000377107 TPD52L1Q16890 204 aaPredicted RBP15.15■□□□□ 0.02
USP11-204ENST00000377107 IMMTQ16891 758 aaKnown RBP15.15■□□□□ 0.02
USP11-204ENST00000377107 KIF6Q6ZMV9 814 aa15.15■□□□□ 0.02
USP11-204ENST00000377107 IL17RAQ96F46 866 aa15.15■□□□□ 0.02
USP11-204ENST00000377107 CLSTN2Q9H4D0 955 aa15.15■□□□□ 0.02
USP11-204ENST00000377107 MAST3O60307 1309 aa15.15■□□□□ 0.02
USP11-204ENST00000377107 SCARF1Q14162 830 aa15.15■□□□□ 0.02
USP11-204ENST00000377107 SYNE3Q6ZMZ3 975 aa15.15■□□□□ 0.02
USP11-204ENST00000377107 CADPS2Q86UW7 1296 aa15.15■□□□□ 0.02
USP11-204ENST00000377107 NSUN7Q8NE18 718 aaKnown RBP15.15■□□□□ 0.02
USP11-204ENST00000377107 KCNB2Q92953 911 aa15.15■□□□□ 0.02
USP11-204ENST00000377107 ASAP1Q9ULH1 1129 aa15.15■□□□□ 0.02
USP11-204ENST00000377107 TRDNQ13061 729 aa15.14■□□□□ 0.01
USP11-204ENST00000377107 C8orf76Q96K31 380 aa15.14■□□□□ 0.01
USP11-204ENST00000377107 ORC3Q9UBD5 711 aaPredicted RBP15.14■□□□□ 0.01
USP11-204ENST00000377107 TBC1D2BQ9UPU7 963 aa15.14■□□□□ 0.01
USP11-204ENST00000377107 C1orf167Q5SNV9 1468 aa15.14■□□□□ 0.01
USP11-204ENST00000377107 SNAP23O00161 211 aa15.14■□□□□ 0.01
USP11-204ENST00000377107 MARCKSP29966 332 aaPredicted RBP15.14■□□□□ 0.01
USP11-204ENST00000377107 RESTQ13127 1097 aa15.14■□□□□ 0.01
USP11-204ENST00000377107 FUCA2Q9BTY2 467 aa15.14■□□□□ 0.01
USP11-204ENST00000377107 KCNF1Q9H3M0 494 aa15.14■□□□□ 0.01
USP11-204ENST00000377107 HEG1Q9ULI3 1381 aa15.14■□□□□ 0.01
USP11-204ENST00000377107 PRC1O43663 620 aa15.14■□□□□ 0.01
USP11-204ENST00000377107 ARID5BQ14865 1188 aa15.14■□□□□ 0.01
USP11-204ENST00000377107 MICU3Q86XE3 530 aa15.13■□□□□ 0.01
USP11-204ENST00000377107 ZNF396Q96N95 335 aaPredicted RBP15.13■□□□□ 0.01
USP11-204ENST00000377107 CACNA1FO60840 1977 aa15.13■□□□□ 0.01
USP11-204ENST00000377107 HMGB1P09429 215 aaKnown RBP15.13■□□□□ 0.01
USP11-204ENST00000377107 C11orf57Q6ZUT1 292 aaPredicted RBP15.13■□□□□ 0.01
USP11-204ENST00000377107 CHMP4CQ96CF2 233 aa15.13■□□□□ 0.01
USP11-204ENST00000377107 ZSCAN16Q9H4T2 348 aaPredicted RBP15.13■□□□□ 0.01
USP11-204ENST00000377107 H7C1W4 665 aa15.13■□□□□ 0.01
USP11-204ENST00000377107 DYNC1I1O14576 645 aa15.13■□□□□ 0.01
USP11-204ENST00000377107 ZNF213O14771 459 aa15.13■□□□□ 0.01
USP11-204ENST00000377107 PDIA3P30101 505 aaKnown RBP15.13■□□□□ 0.01
USP11-204ENST00000377107 MYL10Q9BUA6 226 aa15.13■□□□□ 0.01
USP11-204ENST00000377107 IQSEC3Q9UPP2 1182 aaPredicted RBP15.13■□□□□ 0.01
USP11-204ENST00000377107 SMC2O95347 1197 aa15.12■□□□□ 0.01
USP11-204ENST00000377107 RABL6Q3YEC7 729 aaPredicted RBP15.12■□□□□ 0.01
USP11-204ENST00000377107 SLC9C2Q5TAH2 1124 aa15.12■□□□□ 0.01
USP11-204ENST00000377107 ZMYND15Q9H091 742 aa15.12■□□□□ 0.01
USP11-204ENST00000377107 TRMT112Q9UI30 125 aaKnown RBP15.12■□□□□ 0.01
USP11-204ENST00000377107 LRRC37A3O60309 1634 aa15.12■□□□□ 0.01
USP11-204ENST00000377107 FGAP02671 866 aa15.12■□□□□ 0.01
USP11-204ENST00000377107 IL2RBP14784 551 aa15.12■□□□□ 0.01
USP11-204ENST00000377107 HMGN5P82970 282 aaKnown RBP15.12■□□□□ 0.01
USP11-204ENST00000377107 HSP90AA4PQ58FG1 418 aa15.12■□□□□ 0.01
USP11-204ENST00000377107 AOPEPQ8N6M6 819 aa15.12■□□□□ 0.01
USP11-204ENST00000377107 PUS7LQ9H0K6 701 aaKnown RBP15.12■□□□□ 0.01
USP11-204ENST00000377107 DENND2AQ9ULE3 1009 aa15.12■□□□□ 0.01
USP11-204ENST00000377107 SPDYE4A6NLX3 237 aa15.12■□□□□ 0.01
USP11-204ENST00000377107 CBX1P83916 185 aa15.12■□□□□ 0.01
USP11-204ENST00000377107 ZMYM1Q5SVZ6 1142 aa15.12■□□□□ 0.01
USP11-204ENST00000377107 INCENPQ9NQS7 918 aa15.12■□□□□ 0.01
USP11-204ENST00000377107 HELLSQ9NRZ9 838 aa15.12■□□□□ 0.01
USP11-204ENST00000377107 PFKFB2O60825 505 aa15.11■□□□□ 0.01
USP11-204ENST00000377107 ATP2B3Q16720 1220 aa15.11■□□□□ 0.01
USP11-204ENST00000377107 CCDC191Q8NCU4 936 aa15.11■□□□□ 0.01
USP11-204ENST00000377107 AIFM3Q96NN9 605 aa15.11■□□□□ 0.01
USP11-204ENST00000377107 GOLPH3LQ9H4A5 285 aa15.11■□□□□ 0.01
USP11-204ENST00000377107 CTDNEP1O95476 244 aa15.11■□□□□ 0.01
USP11-204ENST00000377107 RIOK3O14730 519 aaKnown RBP15.1■□□□□ 0.01
USP11-204ENST00000377107 ZNF75DP51815 510 aa15.1■□□□□ 0.01
USP11-204ENST00000377107 USPL1Q5W0Q7 1092 aa15.1■□□□□ 0.01
USP11-204ENST00000377107 LRP10Q7Z4F1 713 aa15.1■□□□□ 0.01
USP11-204ENST00000377107 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.1■□□□□ 0.01
USP11-204ENST00000377107 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.1■□□□□ 0.01
USP11-204ENST00000377107 V9GYY5 206 aaPredicted RBP15.1■□□□□ 0.01
USP11-204ENST00000377107 PCDH11XQ9BZA7 1347 aa15.1■□□□□ 0.01
USP11-204ENST00000377107 PCDH11YQ9BZA8 1340 aa15.1■□□□□ 0.01
USP11-204ENST00000377107 GPAA1O43292 621 aa15.1■□□□□ 0.01
USP11-204ENST00000377107 TNNT1P13805 278 aa15.1■□□□□ 0.01
USP11-204ENST00000377107 KIAA1524Q8TCG1 905 aa15.1■□□□□ 0.01
USP11-204ENST00000377107 PHKBQ93100 1093 aa15.1■□□□□ 0.01
USP11-204ENST00000377107 CTNNA3Q9UI47 895 aa15.1■□□□□ 0.01
USP11-204ENST00000377107 LRRFIP1Q32MZ4 808 aaKnown RBP15.09■□□□□ 0.01
USP11-204ENST00000377107 MYRIPQ8NFW9 859 aa15.09■□□□□ 0.01
USP11-204ENST00000377107 CLIC4Q9Y696 253 aa15.09■□□□□ 0.01
USP11-204ENST00000377107 ELP1O95163 1332 aa15.09■□□□□ 0.01
USP11-204ENST00000377107 ITGA6P23229 1130 aa15.09■□□□□ 0.01
USP11-204ENST00000377107 ADD1P35611 737 aaKnown RBP15.09■□□□□ 0.01
USP11-204ENST00000377107 CASP7P55210 303 aa15.09■□□□□ 0.01
USP11-204ENST00000377107 PTPN21Q16825 1174 aa15.09■□□□□ 0.01
USP11-204ENST00000377107 AKAP2Q9Y2D5 859 aa15.09■□□□□ 0.01
USP11-204ENST00000377107 HLFQ16534 295 aa15.09■□□□□ 0.01
USP11-204ENST00000377107 GREM2Q9H772 168 aa15.09■□□□□ 0.01
USP11-204ENST00000377107 ZKSCAN3Q9BRR0 538 aa15.08■□□□□ 0.01
USP11-204ENST00000377107 DSCC1Q9BVC3 393 aa15.08■□□□□ 0.01
USP11-204ENST00000377107 B4E1Z4 1266 aa15.08■□□□□ 0
USP11-204ENST00000377107 STX1AQ16623 288 aa15.08■□□□□ 0
USP11-204ENST00000377107 TCIRG1Q13488 830 aa15.08■□□□□ 0
USP11-204ENST00000377107 CCDC144BQ3MJ40 725 aa15.08■□□□□ 0
USP11-204ENST00000377107 TSGA10IPQ3SY00 556 aa15.08■□□□□ 0
USP11-204ENST00000377107 CEP57L1Q8IYX8 460 aa15.08■□□□□ 0
USP11-204ENST00000377107 NCOA7Q8NI08 942 aa15.08■□□□□ 0
USP11-204ENST00000377107 CACTINQ8WUQ7 758 aaKnown RBP15.08■□□□□ 0
USP11-204ENST00000377107 PCDHA7Q9UN72 937 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms