RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 LAMA4Q16363 1823 aa20.25■□□□□ 0.83
PTPN20-203ENST00000374342 CARMIL3Q8ND23 1372 aa20.25■□□□□ 0.83
PTPN20-203ENST00000374342 SNAP23O00161 211 aa20.25■□□□□ 0.83
PTPN20-203ENST00000374342 SSFA2P28290 1259 aa20.25■□□□□ 0.83
PTPN20-203ENST00000374342 ARID4AP29374 1257 aaPredicted RBP20.25■□□□□ 0.83
PTPN20-203ENST00000374342 CHRNDQ07001 517 aa20.25■□□□□ 0.83
PTPN20-203ENST00000374342 LRRFIP1Q32MZ4 808 aaKnown RBP20.25■□□□□ 0.83
PTPN20-203ENST00000374342 SLC27A3Q5K4L6 730 aa20.25■□□□□ 0.83
PTPN20-203ENST00000374342 SLC10A5Q5PT55 438 aa20.25■□□□□ 0.83
PTPN20-203ENST00000374342 CCDC24Q8N4L8 307 aa20.25■□□□□ 0.83
PTPN20-203ENST00000374342 ZGPATQ8N5A5 531 aaKnown RBP20.25■□□□□ 0.83
PTPN20-203ENST00000374342 IL27Q8NEV9 243 aa20.25■□□□□ 0.83
PTPN20-203ENST00000374342 ZNF512BQ96KM6 892 aaPredicted RBP20.25■□□□□ 0.83
PTPN20-203ENST00000374342 TTC14Q96N46 770 aa20.25■□□□□ 0.83
PTPN20-203ENST00000374342 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.24■□□□□ 0.83
PTPN20-203ENST00000374342 NPHP1O15259 732 aa20.24■□□□□ 0.83
PTPN20-203ENST00000374342 ADRA2BP18089 450 aa20.24■□□□□ 0.83
PTPN20-203ENST00000374342 UQCRFS1P1P0C7P4 283 aa20.23■□□□□ 0.83
PTPN20-203ENST00000374342 RAB3GAP1Q15042 981 aa20.23■□□□□ 0.83
PTPN20-203ENST00000374342 TM6SF1Q9BZW5 370 aa20.23■□□□□ 0.83
PTPN20-203ENST00000374342 HMG20BQ9P0W2 317 aa20.23■□□□□ 0.83
PTPN20-203ENST00000374342 CYP46A1Q9Y6A2 500 aa20.23■□□□□ 0.83
PTPN20-203ENST00000374342 U3KPZ7 1027 aaPredicted RBP20.23■□□□□ 0.83
PTPN20-203ENST00000374342 M0R2C6 588 aa20.23■□□□□ 0.83
PTPN20-203ENST00000374342 AK2P54819 239 aa20.23■□□□□ 0.83
PTPN20-203ENST00000374342 TPTE2Q6XPS3 522 aa20.23■□□□□ 0.83
PTPN20-203ENST00000374342 ZFYP08048 801 aaPredicted RBP20.22■□□□□ 0.83
PTPN20-203ENST00000374342 NLRP3Q96P20 1036 aa20.22■□□□□ 0.83
PTPN20-203ENST00000374342 ZSWIM6Q9HCJ5 1215 aa20.22■□□□□ 0.83
PTPN20-203ENST00000374342 TAF6LQ9Y6J9 622 aa20.22■□□□□ 0.83
PTPN20-203ENST00000374342 MYH13Q9UKX3 1938 aa20.22■□□□□ 0.83
PTPN20-203ENST00000374342 WASHC4Q2M389 1173 aa20.21■□□□□ 0.83
PTPN20-203ENST00000374342 PDRG1Q9NUG6 133 aa20.21■□□□□ 0.83
PTPN20-203ENST00000374342 CYP2E1P05181 493 aaPredicted RBP20.21■□□□□ 0.83
PTPN20-203ENST00000374342 PSMA5P28066 241 aa20.21■□□□□ 0.83
PTPN20-203ENST00000374342 CUL4AQ13619 759 aa20.21■□□□□ 0.83
PTPN20-203ENST00000374342 NFIXQ14938 502 aa20.21■□□□□ 0.83
PTPN20-203ENST00000374342 VPS53Q5VIR6 699 aa20.21■□□□□ 0.83
PTPN20-203ENST00000374342 RUFY3Q7L099 469 aa20.21■□□□□ 0.83
PTPN20-203ENST00000374342 CELF1Q92879 486 aaKnown RBP20.21■□□□□ 0.83
PTPN20-203ENST00000374342 TNPO1Q92973 898 aaKnown RBP20.21■□□□□ 0.83
PTPN20-203ENST00000374342 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.21■□□□□ 0.83
PTPN20-203ENST00000374342 CWC22Q9HCG8 908 aaKnown RBP20.21■□□□□ 0.83
PTPN20-203ENST00000374342 TTF1Q15361 905 aaPredicted RBP20.2■□□□□ 0.82
PTPN20-203ENST00000374342 OSBP2Q969R2 916 aa20.2■□□□□ 0.82
PTPN20-203ENST00000374342 PIH1D3Q9NQM4 214 aaKnown RBP20.2■□□□□ 0.82
PTPN20-203ENST00000374342 TNS1Q9HBL0 1735 aaKnown RBP20.2■□□□□ 0.82
PTPN20-203ENST00000374342 DSCC1Q9BVC3 393 aa20.19■□□□□ 0.82
PTPN20-203ENST00000374342 BSDC1Q9NW68 430 aaPredicted RBP20.19■□□□□ 0.82
PTPN20-203ENST00000374342 RASGRF1Q13972 1273 aa20.19■□□□□ 0.82
PTPN20-203ENST00000374342 TXNRD1Q16881 649 aa20.19■□□□□ 0.82
PTPN20-203ENST00000374342 APPBP2Q92624 585 aa20.19■□□□□ 0.82
PTPN20-203ENST00000374342 LARP6Q9BRS8 491 aaKnown RBP20.19■□□□□ 0.82
PTPN20-203ENST00000374342 IDH1O75874 414 aaKnown RBP20.18■□□□□ 0.82
PTPN20-203ENST00000374342 ZSCAN25Q6NSZ9 544 aa20.18■□□□□ 0.82
PTPN20-203ENST00000374342 BLOC1S2Q6QNY1 142 aa20.18■□□□□ 0.82
PTPN20-203ENST00000374342 CNBD1Q8NA66 436 aa20.18■□□□□ 0.82
PTPN20-203ENST00000374342 SPATA5Q8NB90 893 aa20.18■□□□□ 0.82
PTPN20-203ENST00000374342 MCM4P33991 863 aa20.17■□□□□ 0.82
PTPN20-203ENST00000374342 KRT32Q14532 448 aa20.17■□□□□ 0.82
PTPN20-203ENST00000374342 LIMCH1Q9UPQ0 1083 aa20.17■□□□□ 0.82
PTPN20-203ENST00000374342 CYP21A2P08686 494 aa20.17■□□□□ 0.82
PTPN20-203ENST00000374342 HSPD1P10809 573 aaKnown RBP20.17■□□□□ 0.82
PTPN20-203ENST00000374342 BCAMP50895 628 aa20.17■□□□□ 0.82
PTPN20-203ENST00000374342 NUCB2P80303 420 aa20.17■□□□□ 0.82
PTPN20-203ENST00000374342 COL9A3Q14050 684 aaPredicted RBP20.17■□□□□ 0.82
PTPN20-203ENST00000374342 TSGA10IPQ3SY00 556 aa20.17■□□□□ 0.82
PTPN20-203ENST00000374342 INTS4Q96HW7 963 aaKnown RBP20.17■□□□□ 0.82
PTPN20-203ENST00000374342 GYS1P13807 737 aa20.16■□□□□ 0.82
PTPN20-203ENST00000374342 RPS6KB1P23443 525 aa20.16■□□□□ 0.82
PTPN20-203ENST00000374342 ADD2P35612 726 aa20.16■□□□□ 0.82
PTPN20-203ENST00000374342 MINPP1Q9UNW1 487 aa20.16■□□□□ 0.82
PTPN20-203ENST00000374342 PKP1Q13835 747 aa20.15■□□□□ 0.82
PTPN20-203ENST00000374342 SLC9C2Q5TAH2 1124 aa20.15■□□□□ 0.82
PTPN20-203ENST00000374342 GBP4Q96PP9 640 aa20.15■□□□□ 0.82
PTPN20-203ENST00000374342 PUS7LQ9H0K6 701 aaKnown RBP20.15■□□□□ 0.82
PTPN20-203ENST00000374342 LARGE1O95461 756 aa20.15■□□□□ 0.82
PTPN20-203ENST00000374342 RPS8P62241 208 aaKnown RBP20.15■□□□□ 0.82
PTPN20-203ENST00000374342 PROM2Q8N271 834 aa20.15■□□□□ 0.82
PTPN20-203ENST00000374342 TCEANC2Q96MN5 208 aa20.15■□□□□ 0.82
PTPN20-203ENST00000374342 WWC3Q9ULE0 1092 aa20.15■□□□□ 0.82
PTPN20-203ENST00000374342 PDE6AP16499 860 aa20.14■□□□□ 0.81
PTPN20-203ENST00000374342 RXRBP28702 533 aa20.14■□□□□ 0.81
PTPN20-203ENST00000374342 UBE4AQ14139 1066 aa20.14■□□□□ 0.81
PTPN20-203ENST00000374342 GPAA1O43292 621 aa20.14■□□□□ 0.81
PTPN20-203ENST00000374342 PRR5LQ6MZQ0 368 aa20.14■□□□□ 0.81
PTPN20-203ENST00000374342 NEK1Q96PY6 1258 aa20.14■□□□□ 0.81
PTPN20-203ENST00000374342 RGPD3A6NKT7 1758 aaPredicted RBP20.13■□□□□ 0.81
PTPN20-203ENST00000374342 RGPD4Q7Z3J3 1758 aa20.13■□□□□ 0.81
PTPN20-203ENST00000374342 ZNF532Q9HCE3 1301 aa20.13■□□□□ 0.81
PTPN20-203ENST00000374342 WTIPA6NIX2 430 aaPredicted RBP20.13■□□□□ 0.81
PTPN20-203ENST00000374342 GYG1P46976 350 aa20.13■□□□□ 0.81
PTPN20-203ENST00000374342 IQSEC3Q9UPP2 1182 aaPredicted RBP20.13■□□□□ 0.81
PTPN20-203ENST00000374342 COL1A1P02452 1464 aaPredicted RBP20.12■□□□□ 0.81
PTPN20-203ENST00000374342 DDX11L8A8MPP1 907 aa20.12■□□□□ 0.81
PTPN20-203ENST00000374342 APBA3O96018 575 aa20.12■□□□□ 0.81
PTPN20-203ENST00000374342 UBE3CQ15386 1083 aa20.12■□□□□ 0.81
PTPN20-203ENST00000374342 STOX1Q6ZVD7 989 aa20.12■□□□□ 0.81
PTPN20-203ENST00000374342 ZNF804BA4D1E1 1349 aa20.12■□□□□ 0.81
PTPN20-203ENST00000374342 A0A0G2JLW4 131 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms