RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 CYP21A2P08686 494 aa13.6□□□□□ -0.23
SMARCA1-201ENST00000371121 FOSBP53539 338 aa13.6□□□□□ -0.23
SMARCA1-201ENST00000371121 RUFY2Q8WXA3 655 aa13.6□□□□□ -0.23
SMARCA1-201ENST00000371121 ALDH1L1O75891 902 aa13.6□□□□□ -0.23
SMARCA1-201ENST00000371121 FDPSP14324 419 aaKnown RBP13.6□□□□□ -0.23
SMARCA1-201ENST00000371121 EVCP57679 992 aa13.6□□□□□ -0.23
SMARCA1-201ENST00000371121 TSPYL1Q9H0U9 437 aa13.6□□□□□ -0.23
SMARCA1-201ENST00000371121 ANO10Q9NW15 660 aa13.6□□□□□ -0.23
SMARCA1-201ENST00000371121 MRFAP1Q9Y605 127 aa13.6□□□□□ -0.23
SMARCA1-201ENST00000371121 TSPOAP1O95153 1857 aa13.6□□□□□ -0.23
SMARCA1-201ENST00000371121 NCAPD2Q15021 1401 aa13.6□□□□□ -0.23
SMARCA1-201ENST00000371121 KIAA1468Q9P260 1216 aa13.6□□□□□ -0.23
SMARCA1-201ENST00000371121 CEMIPQ8WUJ3 1361 aa13.59□□□□□ -0.23
SMARCA1-201ENST00000371121 CTAGE5O15320 804 aa13.59□□□□□ -0.23
SMARCA1-201ENST00000371121 TFRCP02786 760 aaKnown RBP13.59□□□□□ -0.23
SMARCA1-201ENST00000371121 CCDC129Q6ZRS4 1044 aa13.59□□□□□ -0.23
SMARCA1-201ENST00000371121 ZSCAN16Q9H4T2 348 aaPredicted RBP13.59□□□□□ -0.23
SMARCA1-201ENST00000371121 SUGCTQ9HAC7 445 aa13.59□□□□□ -0.23
SMARCA1-201ENST00000371121 RRP15Q9Y3B9 282 aaKnown RBP13.59□□□□□ -0.23
SMARCA1-201ENST00000371121 C4AP0C0L4 1744 aa13.59□□□□□ -0.23
SMARCA1-201ENST00000371121 C4BP0C0L5 1744 aa13.59□□□□□ -0.23
SMARCA1-201ENST00000371121 MROH7-TTC4A0A0A0MT08 1334 aa13.59□□□□□ -0.23
SMARCA1-201ENST00000371121 BECN2A8MW95 431 aa13.59□□□□□ -0.23
SMARCA1-201ENST00000371121 IRX3P78415 501 aaPredicted RBP13.59□□□□□ -0.23
SMARCA1-201ENST00000371121 CCDC8Q9H0W5 538 aaPredicted RBP13.59□□□□□ -0.23
SMARCA1-201ENST00000371121 PSD3Q9NYI0 1048 aa13.59□□□□□ -0.23
SMARCA1-201ENST00000371121 ATP8B1O43520 1251 aa13.58□□□□□ -0.23
SMARCA1-201ENST00000371121 CASQ1P31415 396 aa13.58□□□□□ -0.23
SMARCA1-201ENST00000371121 LRRFIP1Q32MZ4 808 aaKnown RBP13.58□□□□□ -0.23
SMARCA1-201ENST00000371121 HDGFL1Q5TGJ6 251 aa13.58□□□□□ -0.23
SMARCA1-201ENST00000371121 UBXN4Q92575 508 aa13.58□□□□□ -0.23
SMARCA1-201ENST00000371121 ANKZF1Q9H8Y5 726 aa13.58□□□□□ -0.23
SMARCA1-201ENST00000371121 ANKRD1Q15327 319 aa13.58□□□□□ -0.24
SMARCA1-201ENST00000371121 AACSQ86V21 672 aa13.58□□□□□ -0.24
SMARCA1-201ENST00000371121 FSIP1Q8NA03 581 aa13.58□□□□□ -0.24
SMARCA1-201ENST00000371121 CCDC150Q8NCX0 1101 aa13.58□□□□□ -0.24
SMARCA1-201ENST00000371121 CFAP45Q9UL16 551 aa13.58□□□□□ -0.24
SMARCA1-201ENST00000371121 PALLDQ8WX93 1383 aa13.58□□□□□ -0.24
SMARCA1-201ENST00000371121 PSMA5P28066 241 aa13.58□□□□□ -0.24
SMARCA1-201ENST00000371121 NCOA5Q9HCD5 579 aaKnown RBP13.58□□□□□ -0.24
SMARCA1-201ENST00000371121 CLIC4Q9Y696 253 aa13.58□□□□□ -0.24
SMARCA1-201ENST00000371121 SBNO1A3KN83 1393 aa13.58□□□□□ -0.24
SMARCA1-201ENST00000371121 DIP2AQ14689 1571 aa13.58□□□□□ -0.24
SMARCA1-201ENST00000371121 GNAT3A8MTJ3 354 aa13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 PSME1Q06323 249 aa13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 PROSER3Q2NL68 480 aa13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 GOLGA5Q8TBA6 731 aa13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 KLHDC4Q8TBB5 520 aa13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 UTP14AQ9BVJ6 771 aaKnown RBP13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 IRX2Q9BZI1 471 aaPredicted RBP13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 SFPQP23246 707 aaKnown RBP eCLIP13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 TOGARAM2Q6ZUX3 1019 aa13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 CEP57L1Q8IYX8 460 aa13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 BOLA2Q9H3K6 86 aa13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 BIN1O00499 593 aa13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 PFKFB2O60825 505 aa13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 URI1O94763 535 aaPredicted RBP13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 NAA16Q6N069 864 aaPredicted RBP13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 CLASRPQ8N2M8 674 aaKnown RBP13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 DNAAF4Q8WXU2 420 aa13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 PNKPQ96T60 521 aa13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 SIL1Q9H173 461 aa13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 SMC2O95347 1197 aa13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 BMP6P22004 513 aa13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 EXOC4Q96A65 974 aa13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 AGXT2Q9BYV1 514 aa13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 GJB4Q9NTQ9 266 aa13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 FLT4P35916 1363 aa13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 LMOD1P29536 600 aaPredicted RBP13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 CDC27P30260 824 aa13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 EIF4A1P60842 406 aaKnown RBP13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 TPM4P67936 248 aa13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 GUCY1B3Q02153 619 aa13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 TBX2Q13207 712 aaPredicted RBP13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 CWF19L2Q2TBE0 894 aaKnown RBP13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 YY1AP1Q9H869 796 aa13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 LMO7Q8WWI1 1683 aa13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 SIPA1L3O60292 1781 aaPredicted RBP13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 NUTM2FA1L443 756 aa13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 HTATSF1O43719 755 aaKnown RBP13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 FANCCQ00597 558 aa13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 LONRF2Q1L5Z9 754 aa13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 BEND6Q5SZJ8 279 aaPredicted RBP13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 AXDND1Q5T1B0 1012 aaPredicted RBP13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 NUTM2GQ5VZR2 741 aa13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 LINC00301Q8NCQ3 95 aa13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 PTPDC1A2A3K4 754 aa13.55□□□□□ -0.24
SMARCA1-201ENST00000371121 WWC2Q6AWC2 1192 aa13.55□□□□□ -0.24
SMARCA1-201ENST00000371121 ISM2Q6H9L7 571 aa13.55□□□□□ -0.24
SMARCA1-201ENST00000371121 DHX58Q96C10 678 aa13.55□□□□□ -0.24
SMARCA1-201ENST00000371121 AKAP2Q9Y2D5 859 aa13.55□□□□□ -0.24
SMARCA1-201ENST00000371121 NEO1Q92859 1461 aa13.55□□□□□ -0.24
SMARCA1-201ENST00000371121 USP54Q70EL1 1684 aa13.55□□□□□ -0.24
SMARCA1-201ENST00000371121 ANKRD65E5RJM6 399 aa13.55□□□□□ -0.24
SMARCA1-201ENST00000371121 ACTN2P35609 894 aa13.55□□□□□ -0.24
SMARCA1-201ENST00000371121 GPR161Q8N6U8 529 aaKnown RBP13.55□□□□□ -0.24
SMARCA1-201ENST00000371121 NEK1Q96PY6 1258 aa13.55□□□□□ -0.24
SMARCA1-201ENST00000371121 PRAMEF22A3QJZ6 481 aa13.55□□□□□ -0.24
SMARCA1-201ENST00000371121 ADALQ6DHV7 355 aa13.55□□□□□ -0.24
SMARCA1-201ENST00000371121 FOXP4Q8IVH2 680 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms