RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 ANKRD65E5RJM6 399 aa11.58□□□□□ -0.56
RNF40-202ENST00000357890 JAK2O60674 1132 aa11.58□□□□□ -0.56
RNF40-202ENST00000357890 SEC31AO94979 1220 aaKnown RBP11.58□□□□□ -0.56
RNF40-202ENST00000357890 GYS2P54840 703 aa11.58□□□□□ -0.56
RNF40-202ENST00000357890 CABP4P57796 275 aa11.58□□□□□ -0.56
RNF40-202ENST00000357890 ADCY9O60503 1353 aa11.58□□□□□ -0.56
RNF40-202ENST00000357890 RAD51AP2Q09MP3 1159 aa11.58□□□□□ -0.56
RNF40-202ENST00000357890 STK38Q15208 465 aa11.58□□□□□ -0.56
RNF40-202ENST00000357890 CFAP100Q494V2 611 aa11.58□□□□□ -0.56
RNF40-202ENST00000357890 CCDC129Q6ZRS4 1044 aa11.58□□□□□ -0.56
RNF40-202ENST00000357890 IFNL2Q8IZJ0 200 aa11.58□□□□□ -0.56
RNF40-202ENST00000357890 NFATC2IPQ8NCF5 419 aa11.58□□□□□ -0.56
RNF40-202ENST00000357890 A0A087WZG4 1122 aa11.57□□□□□ -0.56
RNF40-202ENST00000357890 SNRPA1P09661 255 aaKnown RBP11.57□□□□□ -0.56
RNF40-202ENST00000357890 OAS2P29728 719 aaKnown RBP11.57□□□□□ -0.56
RNF40-202ENST00000357890 FKBP4Q02790 459 aaKnown RBP eCLIP11.57□□□□□ -0.56
RNF40-202ENST00000357890 ZNF396Q96N95 335 aaPredicted RBP11.57□□□□□ -0.56
RNF40-202ENST00000357890 ZCCHC17Q9NP64 241 aaKnown RBP11.57□□□□□ -0.56
RNF40-202ENST00000357890 VPS18Q9P253 973 aa11.57□□□□□ -0.56
RNF40-202ENST00000357890 PRAMEF22A3QJZ6 481 aa11.57□□□□□ -0.56
RNF40-202ENST00000357890 USP27XA6NNY8 438 aa11.57□□□□□ -0.56
RNF40-202ENST00000357890 NEMFO60524 1076 aa11.57□□□□□ -0.56
RNF40-202ENST00000357890 RPS6KB1P23443 525 aa11.57□□□□□ -0.56
RNF40-202ENST00000357890 AXDND1Q5T1B0 1012 aaPredicted RBP11.57□□□□□ -0.56
RNF40-202ENST00000357890 SRRTQ9BXP5 876 aaKnown RBP11.57□□□□□ -0.56
RNF40-202ENST00000357890 TLR7Q9NYK1 1049 aaKnown RBP11.57□□□□□ -0.56
RNF40-202ENST00000357890 GOLIM4O00461 696 aa11.57□□□□□ -0.56
RNF40-202ENST00000357890 CCAR1Q8IX12 1150 aaKnown RBP11.57□□□□□ -0.56
RNF40-202ENST00000357890 LEO1Q8WVC0 666 aaPredicted RBP11.57□□□□□ -0.56
RNF40-202ENST00000357890 CARD6Q9BX69 1037 aa11.57□□□□□ -0.56
RNF40-202ENST00000357890 GNG11P61952 73 aa11.56□□□□□ -0.56
RNF40-202ENST00000357890 TTC31Q49AM3 519 aaPredicted RBP11.56□□□□□ -0.56
RNF40-202ENST00000357890 CHST3Q7LGC8 479 aa11.56□□□□□ -0.56
RNF40-202ENST00000357890 ARFGAP3Q9NP61 516 aa11.56□□□□□ -0.56
RNF40-202ENST00000357890 RNF216Q9NWF9 866 aaPredicted RBP11.56□□□□□ -0.56
RNF40-202ENST00000357890 TMEM87AQ8NBN3 555 aa11.56□□□□□ -0.56
RNF40-202ENST00000357890 CCDC85AQ96PX6 553 aaPredicted RBP11.56□□□□□ -0.56
RNF40-202ENST00000357890 MORC2Q9Y6X9 1032 aaPredicted RBP11.56□□□□□ -0.56
RNF40-202ENST00000357890 U3KPZ7 1027 aaPredicted RBP11.56□□□□□ -0.56
RNF40-202ENST00000357890 USP42Q9H9J4 1324 aaKnown RBP11.56□□□□□ -0.56
RNF40-202ENST00000357890 GCKRQ14397 625 aa11.56□□□□□ -0.56
RNF40-202ENST00000357890 RALYLQ86SE5 291 aaKnown RBP11.56□□□□□ -0.56
RNF40-202ENST00000357890 MAP4K1Q92918 833 aa11.56□□□□□ -0.56
RNF40-202ENST00000357890 RPAP1Q9BWH6 1393 aaPredicted RBP11.56□□□□□ -0.56
RNF40-202ENST00000357890 TRIM66O15016 1216 aa11.55□□□□□ -0.56
RNF40-202ENST00000357890 NR1I2O75469 434 aa11.55□□□□□ -0.56
RNF40-202ENST00000357890 MNAT1P51948 309 aa11.55□□□□□ -0.56
RNF40-202ENST00000357890 EVCP57679 992 aa11.55□□□□□ -0.56
RNF40-202ENST00000357890 LRRFIP1Q32MZ4 808 aaKnown RBP11.55□□□□□ -0.56
RNF40-202ENST00000357890 FSIP1Q8NA03 581 aa11.55□□□□□ -0.56
RNF40-202ENST00000357890 ANO10Q9NW15 660 aa11.55□□□□□ -0.56
RNF40-202ENST00000357890 MRVI1Q9Y6F6 885 aa11.55□□□□□ -0.56
RNF40-202ENST00000357890 ADGRL3Q9HAR2 1447 aa11.55□□□□□ -0.56
RNF40-202ENST00000357890 PES1O00541 588 aaKnown RBP11.55□□□□□ -0.56
RNF40-202ENST00000357890 RAB11FIP4Q86YS3 637 aa11.55□□□□□ -0.56
RNF40-202ENST00000357890 METTL22Q9BUU2 404 aaPredicted RBP11.55□□□□□ -0.56
RNF40-202ENST00000357890 SASH1O94885 1247 aa11.55□□□□□ -0.56
RNF40-202ENST00000357890 NECTIN1Q15223 517 aa11.55□□□□□ -0.56
RNF40-202ENST00000357890 STX1AQ16623 288 aa11.55□□□□□ -0.56
RNF40-202ENST00000357890 HSP90AB3PQ58FF7 597 aa11.55□□□□□ -0.56
RNF40-202ENST00000357890 SLC52A2Q9HAB3 445 aa11.55□□□□□ -0.56
RNF40-202ENST00000357890 NEURL1BA8MQ27 555 aa11.54□□□□□ -0.56
RNF40-202ENST00000357890 AP5Z1O43299 807 aa11.54□□□□□ -0.56
RNF40-202ENST00000357890 POLR3DP05423 398 aaPredicted RBP11.54□□□□□ -0.56
RNF40-202ENST00000357890 TFCP2Q12800 502 aa11.54□□□□□ -0.56
RNF40-202ENST00000357890 E2F4Q16254 413 aa11.54□□□□□ -0.56
RNF40-202ENST00000357890 LRRC8AQ8IWT6 810 aa11.54□□□□□ -0.56
RNF40-202ENST00000357890 NCAPD2Q15021 1401 aa11.54□□□□□ -0.56
RNF40-202ENST00000357890 CTIFO43310 598 aaKnown RBP11.54□□□□□ -0.56
RNF40-202ENST00000357890 LMOD1P29536 600 aaPredicted RBP11.54□□□□□ -0.56
RNF40-202ENST00000357890 CASQ1P31415 396 aa11.54□□□□□ -0.56
RNF40-202ENST00000357890 CLCN6P51797 869 aa11.54□□□□□ -0.56
RNF40-202ENST00000357890 TRDNQ13061 729 aa11.54□□□□□ -0.56
RNF40-202ENST00000357890 ZNF589Q86UQ0 364 aaPredicted RBP11.54□□□□□ -0.56
RNF40-202ENST00000357890 MICALL1Q8N3F8 863 aa11.54□□□□□ -0.56
RNF40-202ENST00000357890 SEC62Q99442 399 aaKnown RBP11.54□□□□□ -0.56
RNF40-202ENST00000357890 ZSCAN16Q9H4T2 348 aaPredicted RBP11.54□□□□□ -0.56
RNF40-202ENST00000357890 RABEP2Q9H5N1 569 aa11.54□□□□□ -0.56
RNF40-202ENST00000357890 EIF3JO75822 258 aaKnown RBP11.54□□□□□ -0.56
RNF40-202ENST00000357890 GSDMDP57764 484 aa11.54□□□□□ -0.56
RNF40-202ENST00000357890 HAND2P61296 217 aa11.54□□□□□ -0.56
RNF40-202ENST00000357890 APOBRQ0VD83 1088 aa11.54□□□□□ -0.56
RNF40-202ENST00000357890 IL17RAQ96F46 866 aa11.54□□□□□ -0.56
RNF40-202ENST00000357890 ZNF496Q96IT1 587 aaPredicted RBP11.54□□□□□ -0.56
RNF40-202ENST00000357890 CENPHQ9H3R5 247 aa11.54□□□□□ -0.56
RNF40-202ENST00000357890 IFNKQ9P0W0 207 aa11.54□□□□□ -0.56
RNF40-202ENST00000357890 PATL2C9JE40 543 aaKnown RBP11.53□□□□□ -0.56
RNF40-202ENST00000357890 CCDC144BQ3MJ40 725 aa11.53□□□□□ -0.56
RNF40-202ENST00000357890 MCMDC2Q4G0Z9 681 aa11.53□□□□□ -0.56
RNF40-202ENST00000357890 JAKMIP3Q5VZ66 844 aa11.53□□□□□ -0.56
RNF40-202ENST00000357890 CCDC144CPQ8IYA2 1237 aa11.53□□□□□ -0.56
RNF40-202ENST00000357890 SNRKQ9NRH2 765 aa11.53□□□□□ -0.56
RNF40-202ENST00000357890 HMGB1P09429 215 aaKnown RBP11.53□□□□□ -0.56
RNF40-202ENST00000357890 SMC1AQ14683 1233 aaKnown RBP11.53□□□□□ -0.56
RNF40-202ENST00000357890 DBNDD2Q9BQY9 259 aa11.53□□□□□ -0.56
RNF40-202ENST00000357890 EPC1Q9H2F5 836 aa11.53□□□□□ -0.56
RNF40-202ENST00000357890 CLSTN2Q9H4D0 955 aa11.53□□□□□ -0.56
RNF40-202ENST00000357890 NCOA5Q9HCD5 579 aaKnown RBP11.53□□□□□ -0.56
RNF40-202ENST00000357890 CCP110O43303 1012 aa11.53□□□□□ -0.56
RNF40-202ENST00000357890 TNNI3KQ59H18 835 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms