RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 RC3H1Q5TC82 1133 aaKnown RBP6.41□□□□□ -1.38
VCAM1-202ENST00000347652 NBPF10Q6P3W6 841 aaKnown RBP6.41□□□□□ -1.38
VCAM1-202ENST00000347652 LRP10Q7Z4F1 713 aa6.41□□□□□ -1.38
VCAM1-202ENST00000347652 NBPF15Q8N660 670 aa6.41□□□□□ -1.38
VCAM1-202ENST00000347652 STK31Q9BXU1 1019 aa6.41□□□□□ -1.38
VCAM1-202ENST00000347652 DDX21Q9NR30 783 aaKnown RBP eCLIP6.41□□□□□ -1.38
VCAM1-202ENST00000347652 PROSER3Q2NL68 480 aa6.4□□□□□ -1.38
VCAM1-202ENST00000347652 TRAPPC3LQ5T215 181 aa6.4□□□□□ -1.38
VCAM1-202ENST00000347652 CCDC181Q5TID7 509 aa6.4□□□□□ -1.38
VCAM1-202ENST00000347652 TBC1D9Q6ZT07 1266 aa6.4□□□□□ -1.38
VCAM1-202ENST00000347652 FMNL3Q8IVF7 1028 aa6.4□□□□□ -1.38
VCAM1-202ENST00000347652 PRR7Q8TB68 274 aa6.4□□□□□ -1.38
VCAM1-202ENST00000347652 UBA5Q9GZZ9 404 aa6.4□□□□□ -1.38
VCAM1-202ENST00000347652 ANO2Q9NQ90 1003 aa6.4□□□□□ -1.38
VCAM1-202ENST00000347652 GNL3LQ9NVN8 582 aaKnown RBP6.4□□□□□ -1.38
VCAM1-202ENST00000347652 HYPKQ9NX55 129 aa6.4□□□□□ -1.38
VCAM1-202ENST00000347652 NOB1Q9ULX3 412 aaKnown RBP6.4□□□□□ -1.38
VCAM1-202ENST00000347652 NOP58Q9Y2X3 529 aaKnown RBP6.4□□□□□ -1.38
VCAM1-202ENST00000347652 SUPT16HQ9Y5B9 1047 aaKnown RBP6.4□□□□□ -1.38
VCAM1-202ENST00000347652 WDHD1O75717 1129 aaPredicted RBP6.4□□□□□ -1.38
VCAM1-202ENST00000347652 OSBPP22059 807 aa6.4□□□□□ -1.38
VCAM1-202ENST00000347652 DNAJA1P31689 397 aaKnown RBP6.4□□□□□ -1.38
VCAM1-202ENST00000347652 QPCTQ16769 361 aa6.4□□□□□ -1.38
VCAM1-202ENST00000347652 G2E3Q7L622 706 aa6.4□□□□□ -1.38
VCAM1-202ENST00000347652 COL15A1P39059 1388 aa6.4□□□□□ -1.39
VCAM1-202ENST00000347652 GYS1P13807 737 aa6.4□□□□□ -1.39
VCAM1-202ENST00000347652 ERCC3P19447 782 aa6.4□□□□□ -1.39
VCAM1-202ENST00000347652 RFC4P35249 363 aa6.4□□□□□ -1.39
VCAM1-202ENST00000347652 RRP1P56182 461 aaKnown RBP6.4□□□□□ -1.39
VCAM1-202ENST00000347652 CBLBQ13191 982 aa6.4□□□□□ -1.39
VCAM1-202ENST00000347652 PDAP1Q13442 181 aaKnown RBP6.4□□□□□ -1.39
VCAM1-202ENST00000347652 SLFNL1Q499Z3 407 aa6.4□□□□□ -1.39
VCAM1-202ENST00000347652 USPL1Q5W0Q7 1092 aa6.4□□□□□ -1.39
VCAM1-202ENST00000347652 ARHGAP45Q92619 1136 aa6.4□□□□□ -1.39
VCAM1-202ENST00000347652 RPS6KC1Q96S38 1066 aa6.4□□□□□ -1.39
VCAM1-202ENST00000347652 PHAXQ9H814 394 aaKnown RBP6.4□□□□□ -1.39
VCAM1-202ENST00000347652 BCL2L12Q9HB09 334 aa6.4□□□□□ -1.39
VCAM1-202ENST00000347652 COL24A1Q17RW2 1714 aa6.39□□□□□ -1.39
VCAM1-202ENST00000347652 KIF16BQ96L93 1317 aa6.39□□□□□ -1.39
VCAM1-202ENST00000347652 MYL6BP14649 208 aa6.39□□□□□ -1.39
VCAM1-202ENST00000347652 BDNFP23560 247 aa6.39□□□□□ -1.39
VCAM1-202ENST00000347652 HMGB2P26583 209 aaKnown RBP6.39□□□□□ -1.39
VCAM1-202ENST00000347652 EIF5P55010 431 aaKnown RBP6.39□□□□□ -1.39
VCAM1-202ENST00000347652 C4orf46Q504U0 113 aa6.39□□□□□ -1.39
VCAM1-202ENST00000347652 ACBD3Q9H3P7 528 aa6.39□□□□□ -1.39
VCAM1-202ENST00000347652 HMX1Q9NP08 348 aaPredicted RBP6.39□□□□□ -1.39
VCAM1-202ENST00000347652 GPCPD1Q9NPB8 672 aa6.39□□□□□ -1.39
VCAM1-202ENST00000347652 PTPRCP08575 1304 aa6.39□□□□□ -1.39
VCAM1-202ENST00000347652 USP42Q9H9J4 1324 aaKnown RBP6.39□□□□□ -1.39
VCAM1-202ENST00000347652 PLIN1O60240 522 aa6.39□□□□□ -1.39
VCAM1-202ENST00000347652 IL6STP40189 918 aaPredicted RBP6.39□□□□□ -1.39
VCAM1-202ENST00000347652 ZKSCAN2Q63HK3 967 aa6.39□□□□□ -1.39
VCAM1-202ENST00000347652 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.39□□□□□ -1.39
VCAM1-202ENST00000347652 FRAT1Q92837 279 aaPredicted RBP6.39□□□□□ -1.39
VCAM1-202ENST00000347652 FHDC1Q9C0D6 1143 aaPredicted RBP6.39□□□□□ -1.39
VCAM1-202ENST00000347652 PCDH12Q9NPG4 1184 aa6.39□□□□□ -1.39
VCAM1-202ENST00000347652 CACNA1FO60840 1977 aa6.38□□□□□ -1.39
VCAM1-202ENST00000347652 IPO8O15397 1037 aaKnown RBP6.38□□□□□ -1.39
VCAM1-202ENST00000347652 MMP10P09238 476 aa6.38□□□□□ -1.39
VCAM1-202ENST00000347652 PPP1R15BQ5SWA1 713 aa6.38□□□□□ -1.39
VCAM1-202ENST00000347652 PPP1R18Q6NYC8 613 aa6.38□□□□□ -1.39
VCAM1-202ENST00000347652 ATF7IPQ6VMQ6 1270 aa6.38□□□□□ -1.39
VCAM1-202ENST00000347652 COPS6Q7L5N1 327 aa6.38□□□□□ -1.39
VCAM1-202ENST00000347652 FILIP1Q7Z7B0 1213 aa6.38□□□□□ -1.39
VCAM1-202ENST00000347652 METTL16Q86W50 562 aaKnown RBP6.38□□□□□ -1.39
VCAM1-202ENST00000347652 SLC16A10Q8TF71 515 aa6.38□□□□□ -1.39
VCAM1-202ENST00000347652 WWC3Q9ULE0 1092 aa6.38□□□□□ -1.39
VCAM1-202ENST00000347652 DDR1Q08345 913 aa6.38□□□□□ -1.39
VCAM1-202ENST00000347652 TTLL7Q6ZT98 887 aa6.38□□□□□ -1.39
VCAM1-202ENST00000347652 FLAD1Q8NFF5 587 aa6.38□□□□□ -1.39
VCAM1-202ENST00000347652 NLGN2Q8NFZ4 835 aa6.38□□□□□ -1.39
VCAM1-202ENST00000347652 XAGE3Q8WTP9 111 aa6.38□□□□□ -1.39
VCAM1-202ENST00000347652 CAPN10Q9HC96 672 aa6.38□□□□□ -1.39
VCAM1-202ENST00000347652 MAGEC2Q9UBF1 373 aaPredicted RBP6.38□□□□□ -1.39
VCAM1-202ENST00000347652 TNNQ9UQP3 1299 aa6.38□□□□□ -1.39
VCAM1-202ENST00000347652 TRIM27P14373 513 aa6.37□□□□□ -1.39
VCAM1-202ENST00000347652 GYS2P54840 703 aa6.37□□□□□ -1.39
VCAM1-202ENST00000347652 BICDL1Q6ZP65 573 aa6.37□□□□□ -1.39
VCAM1-202ENST00000347652 CCDC24Q8N4L8 307 aa6.37□□□□□ -1.39
VCAM1-202ENST00000347652 API5Q9BZZ5 524 aaKnown RBP6.37□□□□□ -1.39
VCAM1-202ENST00000347652 CAPN15O75808 1086 aa6.37□□□□□ -1.39
VCAM1-202ENST00000347652 CAMTA2O94983 1202 aa6.37□□□□□ -1.39
VCAM1-202ENST00000347652 AIMP1Q12904 312 aaKnown RBP6.37□□□□□ -1.39
VCAM1-202ENST00000347652 FKBP5Q13451 457 aaPredicted RBP6.37□□□□□ -1.39
VCAM1-202ENST00000347652 PDE3AQ14432 1141 aa6.37□□□□□ -1.39
VCAM1-202ENST00000347652 HLFQ16534 295 aa6.37□□□□□ -1.39
VCAM1-202ENST00000347652 TBC1D9BQ66K14 1250 aa6.37□□□□□ -1.39
VCAM1-202ENST00000347652 JDP2Q8WYK2 163 aa6.37□□□□□ -1.39
VCAM1-202ENST00000347652 NARFQ9UHQ1 456 aa6.37□□□□□ -1.39
VCAM1-202ENST00000347652 ADCY9O60503 1353 aa6.37□□□□□ -1.39
VCAM1-202ENST00000347652 ZPR1O75312 459 aa6.36□□□□□ -1.39
VCAM1-202ENST00000347652 AP1G2O75843 785 aa6.36□□□□□ -1.39
VCAM1-202ENST00000347652 DDX58O95786 925 aaKnown RBP6.36□□□□□ -1.39
VCAM1-202ENST00000347652 ZNF211Q13398 564 aaPredicted RBP6.36□□□□□ -1.39
VCAM1-202ENST00000347652 BIRC2Q13490 618 aa6.36□□□□□ -1.39
VCAM1-202ENST00000347652 NFIXQ14938 502 aa6.36□□□□□ -1.39
VCAM1-202ENST00000347652 C20orf194Q5TEA3 1177 aa6.36□□□□□ -1.39
VCAM1-202ENST00000347652 KSR2Q6VAB6 950 aa6.36□□□□□ -1.39
VCAM1-202ENST00000347652 ANKRD13DQ6ZTN6 518 aa6.36□□□□□ -1.39
VCAM1-202ENST00000347652 DZIP3Q86Y13 1208 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms