RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 CHRNDQ07001 517 aa30.25■■■□□ 2.43
TRADD-201ENST00000345057 HELBQ8NG08 1087 aaPredicted RBP30.25■■■□□ 2.43
TRADD-201ENST00000345057 MCAMP43121 646 aa30.25■■■□□ 2.43
TRADD-201ENST00000345057 KRT32Q14532 448 aa30.25■■■□□ 2.43
TRADD-201ENST00000345057 SLC27A2O14975 620 aa30.24■■■□□ 2.43
TRADD-201ENST00000345057 TSGA10IPQ3SY00 556 aa30.24■■■□□ 2.43
TRADD-201ENST00000345057 DSCC1Q9BVC3 393 aa30.24■■■□□ 2.43
TRADD-201ENST00000345057 CASZ1Q86V15 1759 aa30.24■■■□□ 2.43
TRADD-201ENST00000345057 PLSCR1O15162 318 aa30.23■■■□□ 2.43
TRADD-201ENST00000345057 SCARF1Q14162 830 aa30.23■■■□□ 2.43
TRADD-201ENST00000345057 TXNRD1Q16881 649 aa30.23■■■□□ 2.43
TRADD-201ENST00000345057 TMX3Q96JJ7 454 aa30.23■■■□□ 2.43
TRADD-201ENST00000345057 CYP46A1Q9Y6A2 500 aa30.23■■■□□ 2.43
TRADD-201ENST00000345057 CASTP20810 708 aaKnown RBP30.23■■■□□ 2.43
TRADD-201ENST00000345057 ZSWIM6Q9HCJ5 1215 aa30.23■■■□□ 2.43
TRADD-201ENST00000345057 C3orf67Q6ZVT6 689 aa30.22■■■□□ 2.43
TRADD-201ENST00000345057 JAKMIP1Q96N16 626 aaKnown RBP30.22■■■□□ 2.43
TRADD-201ENST00000345057 PHKA1P46020 1223 aa30.21■■■□□ 2.43
TRADD-201ENST00000345057 NFIXQ14938 502 aa30.21■■■□□ 2.43
TRADD-201ENST00000345057 VPS53Q5VIR6 699 aa30.21■■■□□ 2.43
TRADD-201ENST00000345057 AKAP11Q9UKA4 1901 aa30.21■■■□□ 2.43
TRADD-201ENST00000345057 UBE4AQ14139 1066 aa30.21■■■□□ 2.43
TRADD-201ENST00000345057 INTS4Q96HW7 963 aaKnown RBP30.21■■■□□ 2.43
TRADD-201ENST00000345057 TTC14Q96N46 770 aa30.21■■■□□ 2.43
TRADD-201ENST00000345057 SEC62Q99442 399 aaKnown RBP30.21■■■□□ 2.43
TRADD-201ENST00000345057 CUL4AQ13619 759 aa30.2■■■□□ 2.42
TRADD-201ENST00000345057 CNBD1Q8NA66 436 aa30.2■■■□□ 2.42
TRADD-201ENST00000345057 APPBP2Q92624 585 aa30.2■■■□□ 2.42
TRADD-201ENST00000345057 RPS8P62241 208 aaKnown RBP30.19■■■□□ 2.42
TRADD-201ENST00000345057 RUFY3Q7L099 469 aa30.19■■■□□ 2.42
TRADD-201ENST00000345057 FOXD4L1Q9NU39 408 aa30.19■■■□□ 2.42
TRADD-201ENST00000345057 RPAP1Q9BWH6 1393 aaPredicted RBP30.19■■■□□ 2.42
TRADD-201ENST00000345057 CCDC129Q6ZRS4 1044 aa30.19■■■□□ 2.42
TRADD-201ENST00000345057 MAST3O60307 1309 aa30.18■■■□□ 2.42
TRADD-201ENST00000345057 NUCB2P80303 420 aa30.18■■■□□ 2.42
TRADD-201ENST00000345057 MYH7P12883 1935 aa30.18■■■□□ 2.42
TRADD-201ENST00000345057 GYS1P13807 737 aa30.17■■■□□ 2.42
TRADD-201ENST00000345057 WASHC4Q2M389 1173 aa30.17■■■□□ 2.42
TRADD-201ENST00000345057 SPATA5Q8NB90 893 aa30.17■■■□□ 2.42
TRADD-201ENST00000345057 ANKRD2Q9GZV1 360 aa30.17■■■□□ 2.42
TRADD-201ENST00000345057 PDRG1Q9NUG6 133 aa30.17■■■□□ 2.42
TRADD-201ENST00000345057 CYP2E1P05181 493 aaPredicted RBP30.16■■■□□ 2.42
TRADD-201ENST00000345057 RAB3GAP1Q15042 981 aa30.16■■■□□ 2.42
TRADD-201ENST00000345057 GNL3LQ9NVN8 582 aaKnown RBP30.16■■■□□ 2.42
TRADD-201ENST00000345057 MINPP1Q9UNW1 487 aa30.16■■■□□ 2.42
TRADD-201ENST00000345057 FRAT2O75474 233 aaPredicted RBP30.16■■■□□ 2.42
TRADD-201ENST00000345057 CELF1Q92879 486 aaKnown RBP30.16■■■□□ 2.42
TRADD-201ENST00000345057 LIMCH1Q9UPQ0 1083 aa30.16■■■□□ 2.42
TRADD-201ENST00000345057 CHGBP05060 677 aa30.15■■■□□ 2.42
TRADD-201ENST00000345057 UBE3CQ15386 1083 aa30.15■■■□□ 2.42
TRADD-201ENST00000345057 ADCK5Q3MIX3 580 aa30.15■■■□□ 2.42
TRADD-201ENST00000345057 BLOC1S2Q6QNY1 142 aa30.15■■■□□ 2.42
TRADD-201ENST00000345057 PI16Q6UXB8 463 aa30.15■■■□□ 2.42
TRADD-201ENST00000345057 A0A1B0GUL6 1792 aa30.15■■■□□ 2.42
TRADD-201ENST00000345057 ST5P78524 1137 aa30.14■■■□□ 2.42
TRADD-201ENST00000345057 ANKRD1Q15327 319 aa30.14■■■□□ 2.42
TRADD-201ENST00000345057 APBA3O96018 575 aa30.14■■■□□ 2.42
TRADD-201ENST00000345057 ADD2P35612 726 aa30.14■■■□□ 2.42
TRADD-201ENST00000345057 AK2P54819 239 aa30.14■■■□□ 2.42
TRADD-201ENST00000345057 PROM2Q8N271 834 aa30.14■■■□□ 2.42
TRADD-201ENST00000345057 OSBP2Q969R2 916 aa30.14■■■□□ 2.42
TRADD-201ENST00000345057 ZSCAN31Q96LW9 406 aaPredicted RBP30.14■■■□□ 2.42
TRADD-201ENST00000345057 ALDH8A1Q9H2A2 487 aaPredicted RBP30.14■■■□□ 2.42
TRADD-201ENST00000345057 HSPD1P10809 573 aaKnown RBP30.13■■■□□ 2.41
TRADD-201ENST00000345057 CAVIN4Q5BKX8 364 aa30.13■■■□□ 2.41
TRADD-201ENST00000345057 CTNNA3Q9UI47 895 aa30.13■■■□□ 2.41
TRADD-201ENST00000345057 RASGRF1Q13972 1273 aa30.12■■■□□ 2.41
TRADD-201ENST00000345057 M0R2C6 588 aa30.12■■■□□ 2.41
TRADD-201ENST00000345057 MAP3K12Q12852 859 aa30.12■■■□□ 2.41
TRADD-201ENST00000345057 SLC9C2Q5TAH2 1124 aa30.12■■■□□ 2.41
TRADD-201ENST00000345057 FLAD1Q8NFF5 587 aa30.12■■■□□ 2.41
TRADD-201ENST00000345057 COL4A1P02462 1669 aa30.11■■■□□ 2.41
TRADD-201ENST00000345057 IDH1O75874 414 aaKnown RBP30.11■■■□□ 2.41
TRADD-201ENST00000345057 HMGB1P09429 215 aaKnown RBP30.11■■■□□ 2.41
TRADD-201ENST00000345057 TM4SF1P30408 202 aa30.11■■■□□ 2.41
TRADD-201ENST00000345057 GBP4Q96PP9 640 aa30.11■■■□□ 2.41
TRADD-201ENST00000345057 PIH1D3Q9NQM4 214 aaKnown RBP30.11■■■□□ 2.41
TRADD-201ENST00000345057 SH2B1Q9NRF2 756 aaPredicted RBP30.11■■■□□ 2.41
TRADD-201ENST00000345057 ZNF804BA4D1E1 1349 aa30.11■■■□□ 2.41
TRADD-201ENST00000345057 PRR5LQ6MZQ0 368 aa30.1■■■□□ 2.41
TRADD-201ENST00000345057 EP400Q96L91 3159 aa30.1■■■□□ 2.41
TRADD-201ENST00000345057 BCAMP50895 628 aa30.1■■■□□ 2.41
TRADD-201ENST00000345057 NOL8Q76FK4 1167 aaKnown RBP30.1■■■□□ 2.41
TRADD-201ENST00000345057 SERPINB2P05120 415 aa30.09■■■□□ 2.41
TRADD-201ENST00000345057 CYP21A2P08686 494 aa30.09■■■□□ 2.41
TRADD-201ENST00000345057 RPS6KB1P23443 525 aa30.09■■■□□ 2.41
TRADD-201ENST00000345057 NEK1Q96PY6 1258 aa30.09■■■□□ 2.41
TRADD-201ENST00000345057 TFCP2L1Q9NZI6 479 aa30.09■■■□□ 2.41
TRADD-201ENST00000345057 TNRC6CQ9HCJ0 1690 aaKnown RBP30.09■■■□□ 2.41
TRADD-201ENST00000345057 SNAP23O00161 211 aa30.08■■■□□ 2.41
TRADD-201ENST00000345057 GRAPQ13588 217 aa30.08■■■□□ 2.41
TRADD-201ENST00000345057 SLFNL1Q499Z3 407 aa30.08■■■□□ 2.41
TRADD-201ENST00000345057 GRAPLQ8TC17 118 aaPredicted RBP30.08■■■□□ 2.41
TRADD-201ENST00000345057 VPS37DQ86XT2 251 aa30.08■■■□□ 2.41
TRADD-201ENST00000345057 ZGPATQ8N5A5 531 aaKnown RBP30.08■■■□□ 2.41
TRADD-201ENST00000345057 RGPD3A6NKT7 1758 aaPredicted RBP30.07■■■□□ 2.4
TRADD-201ENST00000345057 RGPD4Q7Z3J3 1758 aa30.07■■■□□ 2.4
TRADD-201ENST00000345057 DOCK2Q92608 1830 aa30.07■■■□□ 2.4
TRADD-201ENST00000345057 SEMA3EO15041 775 aa30.07■■■□□ 2.4
TRADD-201ENST00000345057 PDE6AP16499 860 aa30.07■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms