RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 LMOD1P29536 600 aaPredicted RBP8□□□□□ -1.13
SMC1A-201ENST00000322213 CEP85LQ5SZL2 805 aa8□□□□□ -1.13
SMC1A-201ENST00000322213 ARHGAP6O43182 974 aa8□□□□□ -1.13
SMC1A-201ENST00000322213 MATR3P43243 847 aaKnown RBP eCLIP8□□□□□ -1.13
SMC1A-201ENST00000322213 MAP3K9P80192 1104 aa8□□□□□ -1.13
SMC1A-201ENST00000322213 NBPF6Q5VWK0 638 aa8□□□□□ -1.13
SMC1A-201ENST00000322213 NBPF5PQ86XG9 351 aaPredicted RBP8□□□□□ -1.13
SMC1A-201ENST00000322213 SMARCC2Q8TAQ2 1214 aa8□□□□□ -1.13
SMC1A-201ENST00000322213 NBPF4Q96M43 638 aa8□□□□□ -1.13
SMC1A-201ENST00000322213 SPG7Q9UQ90 795 aa8□□□□□ -1.13
SMC1A-201ENST00000322213 RGS12O14924 1447 aa8□□□□□ -1.13
SMC1A-201ENST00000322213 AKR1B15C9JRZ8 316 aaPredicted RBP8□□□□□ -1.13
SMC1A-201ENST00000322213 STAMBPO95630 424 aa8□□□□□ -1.13
SMC1A-201ENST00000322213 TRIM14Q14142 442 aa8□□□□□ -1.13
SMC1A-201ENST00000322213 MYCNP04198 464 aaPredicted RBP8□□□□□ -1.13
SMC1A-201ENST00000322213 CABS1Q96KC9 395 aa8□□□□□ -1.13
SMC1A-201ENST00000322213 VEZTQ9HBM0 779 aa8□□□□□ -1.13
SMC1A-201ENST00000322213 TTF2Q9UNY4 1162 aaKnown RBP8□□□□□ -1.13
SMC1A-201ENST00000322213 PDE1AP54750 535 aa8□□□□□ -1.13
SMC1A-201ENST00000322213 ZBTB22O15209 634 aa8□□□□□ -1.13
SMC1A-201ENST00000322213 TACC1O75410 805 aa8□□□□□ -1.13
SMC1A-201ENST00000322213 ZBTB40Q9NUA8 1239 aa8□□□□□ -1.13
SMC1A-201ENST00000322213 STIM2Q9P246 746 aa8□□□□□ -1.13
SMC1A-201ENST00000322213 AOX1Q06278 1338 aa8□□□□□ -1.13
SMC1A-201ENST00000322213 CDK5RAP2Q96SN8 1893 aa8□□□□□ -1.13
SMC1A-201ENST00000322213 GSTTP1A0A1W2PQM5 241 aa7.99□□□□□ -1.13
SMC1A-201ENST00000322213 PCK1P35558 622 aa7.99□□□□□ -1.13
SMC1A-201ENST00000322213 UBE4AQ14139 1066 aa7.99□□□□□ -1.13
SMC1A-201ENST00000322213 NEDD9Q14511 834 aa7.99□□□□□ -1.13
SMC1A-201ENST00000322213 ZNF569Q5MCW4 686 aa7.99□□□□□ -1.13
SMC1A-201ENST00000322213 TRIM7Q9C029 511 aa7.99□□□□□ -1.13
SMC1A-201ENST00000322213 CBX8Q9HC52 389 aa7.99□□□□□ -1.13
SMC1A-201ENST00000322213 SEPT11Q9NVA2 429 aaKnown RBP7.99□□□□□ -1.13
SMC1A-201ENST00000322213 PUF60Q9UHX1 559 aaKnown RBP7.99□□□□□ -1.13
SMC1A-201ENST00000322213 EID1Q9Y6B2 187 aa7.99□□□□□ -1.13
SMC1A-201ENST00000322213 PPFIA3O75145 1194 aa7.99□□□□□ -1.13
SMC1A-201ENST00000322213 KIF5AQ12840 1032 aa7.99□□□□□ -1.13
SMC1A-201ENST00000322213 ZNF365Q70YC5 407 aa7.99□□□□□ -1.13
SMC1A-201ENST00000322213 CAPZA3Q96KX2 299 aa7.99□□□□□ -1.13
SMC1A-201ENST00000322213 RNF216Q9NWF9 866 aaPredicted RBP7.99□□□□□ -1.13
SMC1A-201ENST00000322213 MYO1CO00159 1063 aa7.99□□□□□ -1.13
SMC1A-201ENST00000322213 RUFY3Q7L099 469 aa7.99□□□□□ -1.13
SMC1A-201ENST00000322213 TSC1Q92574 1164 aa7.99□□□□□ -1.13
SMC1A-201ENST00000322213 CLSTN2Q9H4D0 955 aa7.99□□□□□ -1.13
SMC1A-201ENST00000322213 ATP2C2O75185 946 aa7.99□□□□□ -1.13
SMC1A-201ENST00000322213 ATP5DP30049 168 aa7.99□□□□□ -1.13
SMC1A-201ENST00000322213 SPAG1Q07617 926 aa7.99□□□□□ -1.13
SMC1A-201ENST00000322213 NUTM2AQ8IVF1 878 aaPredicted RBP7.99□□□□□ -1.13
SMC1A-201ENST00000322213 CACNA2D3Q8IZS8 1091 aa7.99□□□□□ -1.13
SMC1A-201ENST00000322213 ZNF215Q9UL58 517 aaPredicted RBP7.99□□□□□ -1.13
SMC1A-201ENST00000322213 LUC7L2Q9Y383 392 aaKnown RBP7.99□□□□□ -1.13
SMC1A-201ENST00000322213 N4BP3O15049 544 aa7.99□□□□□ -1.13
SMC1A-201ENST00000322213 CEP128Q6ZU80 1094 aa7.99□□□□□ -1.13
SMC1A-201ENST00000322213 BRAPQ7Z569 592 aa7.99□□□□□ -1.13
SMC1A-201ENST00000322213 IFT20Q8IY31 132 aa7.99□□□□□ -1.13
SMC1A-201ENST00000322213 CTNNBL1Q8WYA6 563 aaPredicted RBP7.99□□□□□ -1.13
SMC1A-201ENST00000322213 RAB3IPQ96QF0 476 aaPredicted RBP7.99□□□□□ -1.13
SMC1A-201ENST00000322213 RBM42Q9BTD8 480 aaKnown RBP7.99□□□□□ -1.13
SMC1A-201ENST00000322213 CAPN7Q9Y6W3 813 aa7.99□□□□□ -1.13
SMC1A-201ENST00000322213 RABGGTAQ92696 567 aa7.99□□□□□ -1.13
SMC1A-201ENST00000322213 IL1RAPL2Q9NP60 686 aa7.99□□□□□ -1.13
SMC1A-201ENST00000322213 A0A1W2PRG0 241 aa7.99□□□□□ -1.13
SMC1A-201ENST00000322213 MCTP2Q6DN12 878 aa7.99□□□□□ -1.13
SMC1A-201ENST00000322213 UBAC1Q9BSL1 405 aa7.99□□□□□ -1.13
SMC1A-201ENST00000322213 SPTLC3Q9NUV7 552 aa7.99□□□□□ -1.13
SMC1A-201ENST00000322213 ABCC1P33527 1531 aa7.99□□□□□ -1.13
SMC1A-201ENST00000322213 BMP2KQ9NSY1 1161 aaPredicted RBP7.99□□□□□ -1.13
SMC1A-201ENST00000322213 GPATCH8Q9UKJ3 1502 aaKnown RBP7.98□□□□□ -1.13
SMC1A-201ENST00000322213 ACTN2P35609 894 aa7.98□□□□□ -1.13
SMC1A-201ENST00000322213 AIMP1Q12904 312 aaKnown RBP7.98□□□□□ -1.13
SMC1A-201ENST00000322213 ERCC6LQ2NKX8 1250 aa7.98□□□□□ -1.13
SMC1A-201ENST00000322213 CCDC160A6NGH7 325 aa7.98□□□□□ -1.13
SMC1A-201ENST00000322213 HOOK3Q86VS8 718 aa7.98□□□□□ -1.13
SMC1A-201ENST00000322213 RNF17Q9BXT8 1623 aaKnown RBP7.98□□□□□ -1.13
SMC1A-201ENST00000322213 SETDB1Q15047 1291 aa7.98□□□□□ -1.13
SMC1A-201ENST00000322213 CYP26C1Q6V0L0 522 aa7.98□□□□□ -1.13
SMC1A-201ENST00000322213 CPLX3Q8WVH0 158 aa7.98□□□□□ -1.13
SMC1A-201ENST00000322213 LOXHD1Q8IVV2 1947 aa7.98□□□□□ -1.13
SMC1A-201ENST00000322213 PPLO60437 1756 aa7.98□□□□□ -1.13
SMC1A-201ENST00000322213 SSRP1Q08945 709 aaKnown RBP7.98□□□□□ -1.13
SMC1A-201ENST00000322213 PIK3R4Q99570 1358 aa7.98□□□□□ -1.13
SMC1A-201ENST00000322213 SSBP05455 408 aaKnown RBP eCLIP7.98□□□□□ -1.13
SMC1A-201ENST00000322213 CFAP70Q5T0N1 1121 aa7.98□□□□□ -1.13
SMC1A-201ENST00000322213 STMN2Q93045 179 aa7.98□□□□□ -1.13
SMC1A-201ENST00000322213 CFAP57Q96MR6 1250 aa7.98□□□□□ -1.13
SMC1A-201ENST00000322213 TRIM4Q9C037 500 aa7.98□□□□□ -1.13
SMC1A-201ENST00000322213 N4BP2L2Q92802 583 aaPredicted RBP7.98□□□□□ -1.13
SMC1A-201ENST00000322213 JPH4Q96JJ6 628 aa7.98□□□□□ -1.13
SMC1A-201ENST00000322213 GUCA1BQ9UMX6 200 aa7.98□□□□□ -1.13
SMC1A-201ENST00000322213 USP16Q9Y5T5 823 aa7.98□□□□□ -1.13
SMC1A-201ENST00000322213 UNC13BO14795 1591 aa7.98□□□□□ -1.13
SMC1A-201ENST00000322213 ADGRL2O95490 1459 aa7.98□□□□□ -1.13
SMC1A-201ENST00000322213 SCN8AQ9UQD0 1980 aa7.98□□□□□ -1.13
SMC1A-201ENST00000322213 CETN2P41208 172 aa7.98□□□□□ -1.13
SMC1A-201ENST00000322213 AK2P54819 239 aa7.98□□□□□ -1.13
SMC1A-201ENST00000322213 BIRC2Q13490 618 aa7.98□□□□□ -1.13
SMC1A-201ENST00000322213 HPDP32754 393 aaPredicted RBP7.97□□□□□ -1.13
SMC1A-201ENST00000322213 GAS2L3Q86XJ1 694 aa7.97□□□□□ -1.13
SMC1A-201ENST00000322213 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.97□□□□□ -1.132e-6■■■■■ 105.9
SMC1A-201ENST00000322213 SUFUQ9UMX1 484 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms