RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 EZRP15311 586 aaKnown RBP10.17□□□□□ -0.78
CTDSPL-201ENST00000273179 MAGEA9P43362 315 aa10.17□□□□□ -0.78
CTDSPL-201ENST00000273179 BLVRAP53004 296 aa10.17□□□□□ -0.78
CTDSPL-201ENST00000273179 COBLL1Q53SF7 1204 aa10.17□□□□□ -0.78
CTDSPL-201ENST00000273179 CLIP2Q9UDT6 1046 aa10.17□□□□□ -0.78
CTDSPL-201ENST00000273179 MKRN1Q9UHC7 482 aaKnown RBP10.17□□□□□ -0.78
CTDSPL-201ENST00000273179 STAG3Q9UJ98 1225 aa10.17□□□□□ -0.78
CTDSPL-201ENST00000273179 ATP8A1Q9Y2Q0 1164 aa10.17□□□□□ -0.78
CTDSPL-201ENST00000273179 CCDC7Q96M83 1385 aa10.17□□□□□ -0.78
CTDSPL-201ENST00000273179 B4GALNT2Q8NHY0 566 aa10.17□□□□□ -0.78
CTDSPL-201ENST00000273179 ZBTB10Q96DT7 871 aa10.17□□□□□ -0.78
CTDSPL-201ENST00000273179 YIPF2Q9BWQ6 316 aa10.17□□□□□ -0.78
CTDSPL-201ENST00000273179 CNTLNQ9NXG0 1405 aa10.17□□□□□ -0.78
CTDSPL-201ENST00000273179 USP47Q96K76 1375 aa10.17□□□□□ -0.78
CTDSPL-201ENST00000273179 MMEP08473 750 aa10.17□□□□□ -0.78
CTDSPL-201ENST00000273179 ATP6V1E1P36543 226 aa10.17□□□□□ -0.78
CTDSPL-201ENST00000273179 PPP2R5BQ15173 497 aa10.17□□□□□ -0.78
CTDSPL-201ENST00000273179 NEK10Q6ZWH5 1172 aa10.17□□□□□ -0.78
CTDSPL-201ENST00000273179 SENP3Q9H4L4 574 aaPredicted RBP10.17□□□□□ -0.78
CTDSPL-201ENST00000273179 ESF1Q9H501 851 aaKnown RBP10.17□□□□□ -0.78
CTDSPL-201ENST00000273179 CDC42BPAQ5VT25 1732 aa10.17□□□□□ -0.78
CTDSPL-201ENST00000273179 PRIM1P49642 420 aaKnown RBP10.17□□□□□ -0.78
CTDSPL-201ENST00000273179 PSMD7P51665 324 aa10.17□□□□□ -0.78
CTDSPL-201ENST00000273179 MGARPQ8TDB4 240 aa10.17□□□□□ -0.78
CTDSPL-201ENST00000273179 GPR101Q96P66 508 aaPredicted RBP10.17□□□□□ -0.78
CTDSPL-201ENST00000273179 SLC7A5P2Q9GIP4 190 aa10.17□□□□□ -0.78
CTDSPL-201ENST00000273179 LSM1O15116 133 aaKnown RBP10.16□□□□□ -0.78
CTDSPL-201ENST00000273179 LMAN1P49257 510 aa10.16□□□□□ -0.78
CTDSPL-201ENST00000273179 PSMD6Q15008 389 aa10.16□□□□□ -0.78
CTDSPL-201ENST00000273179 HS1BP3Q53T59 392 aa10.16□□□□□ -0.78
CTDSPL-201ENST00000273179 MCM10Q7L590 875 aa10.16□□□□□ -0.78
CTDSPL-201ENST00000273179 SRLQ86TD4 932 aa10.16□□□□□ -0.78
CTDSPL-201ENST00000273179 ERC1Q8IUD2 1116 aa10.16□□□□□ -0.78
CTDSPL-201ENST00000273179 BCL2L12Q9HB09 334 aa10.16□□□□□ -0.78
CTDSPL-201ENST00000273179 PPP1R9AQ9ULJ8 1098 aa10.16□□□□□ -0.78
CTDSPL-201ENST00000273179 TRAK1Q9UPV9 953 aa10.16□□□□□ -0.78
CTDSPL-201ENST00000273179 GIGYF1O75420 1035 aaPredicted RBP10.16□□□□□ -0.78
CTDSPL-201ENST00000273179 TRIM37O94972 964 aa10.16□□□□□ -0.78
CTDSPL-201ENST00000273179 REC8O95072 547 aa10.16□□□□□ -0.78
CTDSPL-201ENST00000273179 KRT10P13645 584 aa10.16□□□□□ -0.78
CTDSPL-201ENST00000273179 ELF1P32519 619 aa10.16□□□□□ -0.78
CTDSPL-201ENST00000273179 CCSAPQ6IQ19 270 aaPredicted RBP10.16□□□□□ -0.78
CTDSPL-201ENST00000273179 HELQQ8TDG4 1101 aa10.16□□□□□ -0.78
CTDSPL-201ENST00000273179 CAPS2Q9BXY5 557 aa10.16□□□□□ -0.78
CTDSPL-201ENST00000273179 BACH2Q9BYV9 841 aa10.16□□□□□ -0.78
CTDSPL-201ENST00000273179 TSPYL2Q9H2G4 693 aaPredicted RBP10.16□□□□□ -0.78
CTDSPL-201ENST00000273179 MMADHCQ9H3L0 296 aaPredicted RBP10.16□□□□□ -0.78
CTDSPL-201ENST00000273179 ZKSCAN5Q9Y2L8 839 aa10.16□□□□□ -0.78
CTDSPL-201ENST00000273179 PLIN1O60240 522 aa10.16□□□□□ -0.78
CTDSPL-201ENST00000273179 PPP1R14BQ96C90 147 aa10.16□□□□□ -0.78
CTDSPL-201ENST00000273179 AMOTL2Q9Y2J4 779 aa10.16□□□□□ -0.78
CTDSPL-201ENST00000273179 ATP6V0A2Q9Y487 856 aa10.16□□□□□ -0.78
CTDSPL-201ENST00000273179 ARHGAP5Q13017 1502 aa10.16□□□□□ -0.78
CTDSPL-201ENST00000273179 ADCY1Q08828 1119 aa10.15□□□□□ -0.78
CTDSPL-201ENST00000273179 RPRD2Q5VT52 1461 aaKnown RBP10.15□□□□□ -0.78
CTDSPL-201ENST00000273179 FRMD3A2A2Y4 597 aa10.15□□□□□ -0.78
CTDSPL-201ENST00000273179 KIF2AO00139 706 aaPredicted RBP10.15□□□□□ -0.78
CTDSPL-201ENST00000273179 LDHAP00338 332 aaKnown RBP10.15□□□□□ -0.78
CTDSPL-201ENST00000273179 IGHDP01880 384 aa10.15□□□□□ -0.78
CTDSPL-201ENST00000273179 FAPQ12884 760 aa10.15□□□□□ -0.78
CTDSPL-201ENST00000273179 DDB1Q16531 1140 aa10.15□□□□□ -0.78
CTDSPL-201ENST00000273179 STAG2Q8N3U4 1231 aa10.15□□□□□ -0.78
CTDSPL-201ENST00000273179 NGDNQ8NEJ9 315 aaKnown RBP10.15□□□□□ -0.78
CTDSPL-201ENST00000273179 CDK5RAP3Q96JB5 506 aa10.15□□□□□ -0.78
CTDSPL-201ENST00000273179 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.15□□□□□ -0.78
CTDSPL-201ENST00000273179 IFT57Q9NWB7 429 aa10.15□□□□□ -0.78
CTDSPL-201ENST00000273179 FERP16591 822 aa10.15□□□□□ -0.78
CTDSPL-201ENST00000273179 TBC1D10BQ4KMP7 808 aaPredicted RBP10.15□□□□□ -0.78
CTDSPL-201ENST00000273179 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.15□□□□□ -0.78
CTDSPL-201ENST00000273179 INTUQ9ULD6 942 aa10.15□□□□□ -0.78
CTDSPL-201ENST00000273179 TBC1D2BQ9UPU7 963 aa10.15□□□□□ -0.78
CTDSPL-201ENST00000273179 ZC3H4Q9UPT8 1303 aaKnown RBP10.15□□□□□ -0.79
CTDSPL-201ENST00000273179 PTPN14Q15678 1187 aa10.15□□□□□ -0.79
CTDSPL-201ENST00000273179 LONRF1Q17RB8 773 aa10.15□□□□□ -0.79
CTDSPL-201ENST00000273179 BCL2L13Q9BXK5 485 aa10.15□□□□□ -0.79
CTDSPL-201ENST00000273179 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.15□□□□□ -0.79
CTDSPL-201ENST00000273179 GOLGA6L4A6NEF3 574 aa10.14□□□□□ -0.79
CTDSPL-201ENST00000273179 MCM4P33991 863 aa10.14□□□□□ -0.79
CTDSPL-201ENST00000273179 BARGINQ6ZT62 677 aa10.14□□□□□ -0.79
CTDSPL-201ENST00000273179 NLRP13Q86W25 1043 aa10.14□□□□□ -0.79
CTDSPL-201ENST00000273179 TNIP2Q8NFZ5 429 aa10.14□□□□□ -0.79
CTDSPL-201ENST00000273179 RBM46Q8TBY0 533 aaKnown RBP10.14□□□□□ -0.79
CTDSPL-201ENST00000273179 RPGRQ92834 1020 aaKnown RBP10.14□□□□□ -0.79
CTDSPL-201ENST00000273179 PHACTR1Q9C0D0 580 aa10.14□□□□□ -0.79
CTDSPL-201ENST00000273179 KIF7Q2M1P5 1343 aa10.14□□□□□ -0.79
CTDSPL-201ENST00000273179 ARPC4-TTLL3A0A0A6YYG9 625 aa10.14□□□□□ -0.79
CTDSPL-201ENST00000273179 CFAP69A5D8W1 941 aa10.14□□□□□ -0.79
CTDSPL-201ENST00000273179 PIK3CAP42336 1068 aa10.14□□□□□ -0.79
CTDSPL-201ENST00000273179 PDE3BQ13370 1112 aa10.14□□□□□ -0.79
CTDSPL-201ENST00000273179 NEK11Q8NG66 645 aa10.14□□□□□ -0.79
CTDSPL-201ENST00000273179 GSDMBQ8TAX9 411 aa10.14□□□□□ -0.79
CTDSPL-201ENST00000273179 VCX3BQ9H321 246 aa10.14□□□□□ -0.79
CTDSPL-201ENST00000273179 SYCP2Q9BX26 1530 aa10.14□□□□□ -0.79
CTDSPL-201ENST00000273179 KDM1AO60341 852 aa10.14□□□□□ -0.79
CTDSPL-201ENST00000273179 SLFN14P0C7P3 912 aa10.14□□□□□ -0.79
CTDSPL-201ENST00000273179 SKIDA1Q1XH10 827 aa10.14□□□□□ -0.79
CTDSPL-201ENST00000273179 CCDC158Q5M9N0 1113 aa10.14□□□□□ -0.79
CTDSPL-201ENST00000273179 CATIPQ7Z7H3 387 aa10.14□□□□□ -0.79
CTDSPL-201ENST00000273179 PIBF1Q8WXW3 757 aa10.14□□□□□ -0.79
CTDSPL-201ENST00000273179 JPH2Q9BR39 696 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms