RNA–Protein interactions for RNA: ENST00000255304.8

USPL1-201, Transcript of ubiquitin specific peptidase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USPL1, Length 3,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1-201ENST00000255304 KLHL10Q6JEL2 608 aa8.9□□□□□ -0.99
USPL1-201ENST00000255304 ERCC4Q92889 916 aaPredicted RBP8.9□□□□□ -0.99
USPL1-201ENST00000255304 GTF3C6Q969F1 213 aa8.9□□□□□ -0.99
USPL1-201ENST00000255304 SNX21Q969T3 373 aa8.9□□□□□ -0.99
USPL1-201ENST00000255304 TNS3Q68CZ2 1445 aa8.89□□□□□ -0.99
USPL1-201ENST00000255304 CCDC69A6NI79 296 aa8.89□□□□□ -0.99
USPL1-201ENST00000255304 HSPA1LP34931 641 aa8.89□□□□□ -0.99
USPL1-201ENST00000255304 EIF4A1P60842 406 aaKnown RBP8.89□□□□□ -0.99
USPL1-201ENST00000255304 EVI5LQ96CN4 794 aa8.89□□□□□ -0.99
USPL1-201ENST00000255304 KIF2CQ99661 725 aa8.89□□□□□ -0.99
USPL1-201ENST00000255304 IRX3P78415 501 aaPredicted RBP8.89□□□□□ -0.99
USPL1-201ENST00000255304 LRMPQ12912 555 aa8.89□□□□□ -0.99
USPL1-201ENST00000255304 IMMTQ16891 758 aaKnown RBP8.89□□□□□ -0.99
USPL1-201ENST00000255304 UBAC1Q9BSL1 405 aa8.89□□□□□ -0.99
USPL1-201ENST00000255304 NUP62CLQ9H1M0 184 aa8.89□□□□□ -0.99
USPL1-201ENST00000255304 CDK12Q9NYV4 1490 aaPredicted RBP8.89□□□□□ -0.99
USPL1-201ENST00000255304 AHDC1Q5TGY3 1603 aaPredicted RBP8.89□□□□□ -0.99
USPL1-201ENST00000255304 MKI67P46013 3256 aaKnown RBP8.89□□□□□ -0.99
USPL1-201ENST00000255304 PTGS1P23219 599 aa8.89□□□□□ -0.99
USPL1-201ENST00000255304 SART3Q15020 963 aaKnown RBP8.89□□□□□ -0.99
USPL1-201ENST00000255304 ZSCAN29Q8IWY8 852 aaPredicted RBP8.89□□□□□ -0.99
USPL1-201ENST00000255304 TIGD1Q96MW7 591 aa8.89□□□□□ -0.99
USPL1-201ENST00000255304 TLR7Q9NYK1 1049 aaKnown RBP8.89□□□□□ -0.99
USPL1-201ENST00000255304 INSRP06213 1382 aa8.89□□□□□ -0.99
USPL1-201ENST00000255304 TNNT1P13805 278 aa8.88□□□□□ -0.99
USPL1-201ENST00000255304 USP5P45974 858 aa8.88□□□□□ -0.99
USPL1-201ENST00000255304 APOBRQ0VD83 1088 aa8.88□□□□□ -0.99
USPL1-201ENST00000255304 SLC9C2Q5TAH2 1124 aa8.88□□□□□ -0.99
USPL1-201ENST00000255304 AMOTL1Q8IY63 956 aa8.88□□□□□ -0.99
USPL1-201ENST00000255304 NEK1Q96PY6 1258 aa8.88□□□□□ -0.99
USPL1-201ENST00000255304 SIPA1L3O60292 1781 aaPredicted RBP8.88□□□□□ -0.99
USPL1-201ENST00000255304 ANKRD18BA2A2Z9 1011 aa8.88□□□□□ -0.99
USPL1-201ENST00000255304 UBAP1LF5GYI3 381 aa8.88□□□□□ -0.99
USPL1-201ENST00000255304 ZNF213O14771 459 aa8.88□□□□□ -0.99
USPL1-201ENST00000255304 IL2RBP14784 551 aa8.88□□□□□ -0.99
USPL1-201ENST00000255304 USP48Q86UV5 1035 aa8.88□□□□□ -0.99
USPL1-201ENST00000255304 GPATCH11Q8N954 259 aa8.88□□□□□ -0.99
USPL1-201ENST00000255304 PRIMPOLQ96LW4 560 aa8.88□□□□□ -0.99
USPL1-201ENST00000255304 DDX21Q9NR30 783 aaKnown RBP eCLIP8.88□□□□□ -0.99
USPL1-201ENST00000255304 NIP7Q9Y221 180 aaKnown RBP eCLIP8.88□□□□□ -0.99
USPL1-201ENST00000255304 SNAP23O00161 211 aa8.88□□□□□ -0.99
USPL1-201ENST00000255304 HS1BP3Q53T59 392 aa8.88□□□□□ -0.99
USPL1-201ENST00000255304 Q6ZUG5 572 aa8.88□□□□□ -0.99
USPL1-201ENST00000255304 ZHX3Q9H4I2 956 aa8.88□□□□□ -0.99
USPL1-201ENST00000255304 VAT1LQ9HCJ6 419 aa8.88□□□□□ -0.99
USPL1-201ENST00000255304 U3KPZ7 1027 aaPredicted RBP8.88□□□□□ -0.99
USPL1-201ENST00000255304 LAMA2P24043 3122 aaKnown RBP8.87□□□□□ -0.99
USPL1-201ENST00000255304 COL22A1Q8NFW1 1626 aaPredicted RBP8.87□□□□□ -0.99
USPL1-201ENST00000255304 CCDC66A2RUB6 948 aa8.87□□□□□ -0.99
USPL1-201ENST00000255304 IFIT3O14879 490 aaKnown RBP8.87□□□□□ -0.99
USPL1-201ENST00000255304 CCDC192P0DO97 292 aa8.87□□□□□ -0.99
USPL1-201ENST00000255304 PDLIM2Q96JY6 352 aa8.87□□□□□ -0.99
USPL1-201ENST00000255304 SBNO1A3KN83 1393 aa8.87□□□□□ -0.99
USPL1-201ENST00000255304 ZPR1O75312 459 aa8.87□□□□□ -0.99
USPL1-201ENST00000255304 MARCKSP29966 332 aaPredicted RBP8.87□□□□□ -0.99
USPL1-201ENST00000255304 EAF2Q96CJ1 260 aaPredicted RBP8.87□□□□□ -0.99
USPL1-201ENST00000255304 CCDC34Q96HJ3 373 aa8.87□□□□□ -0.99
USPL1-201ENST00000255304 AATKQ6ZMQ8 1374 aa8.87□□□□□ -0.99
USPL1-201ENST00000255304 GIGYF1O75420 1035 aaPredicted RBP8.87□□□□□ -0.99
USPL1-201ENST00000255304 SSBP05455 408 aaKnown RBP eCLIP8.87□□□□□ -0.99
USPL1-201ENST00000255304 SMIM5Q71RC9 77 aa8.87□□□□□ -0.99
USPL1-201ENST00000255304 C10orf67Q8IYJ2 551 aa8.87□□□□□ -0.99
USPL1-201ENST00000255304 CCDC112Q8NEF3 446 aa8.87□□□□□ -0.99
USPL1-201ENST00000255304 MYL10Q9BUA6 226 aa8.87□□□□□ -0.99
USPL1-201ENST00000255304 NACAP1Q9BZK3 213 aa8.87□□□□□ -0.99
USPL1-201ENST00000255304 BRWD3Q6RI45 1802 aa8.87□□□□□ -0.99
USPL1-201ENST00000255304 RTL1A6NKG5 1358 aa8.86□□□□□ -0.99
USPL1-201ENST00000255304 KLF18A0A0U1RQI7 1052 aa8.86□□□□□ -0.99
USPL1-201ENST00000255304 hCG_1642624A0A1W2PR95 340 aa8.86□□□□□ -0.99
USPL1-201ENST00000255304 PRDM1O75626 825 aa8.86□□□□□ -0.99
USPL1-201ENST00000255304 DZIP3Q86Y13 1208 aaKnown RBP8.86□□□□□ -0.99
USPL1-201ENST00000255304 C8orf76Q96K31 380 aa8.86□□□□□ -0.99
USPL1-201ENST00000255304 C5P01031 1676 aa8.86□□□□□ -0.99
USPL1-201ENST00000255304 C6orf229H3BNL8 230 aa8.86□□□□□ -0.99
USPL1-201ENST00000255304 MCM5P33992 734 aa8.86□□□□□ -0.99
USPL1-201ENST00000255304 PTH1RQ03431 593 aa8.86□□□□□ -0.99
USPL1-201ENST00000255304 ANKRD1Q15327 319 aa8.86□□□□□ -0.99
USPL1-201ENST00000255304 DDB1Q16531 1140 aa8.86□□□□□ -0.99
USPL1-201ENST00000255304 CCDC186Q7Z3E2 898 aa8.86□□□□□ -0.99
USPL1-201ENST00000255304 UIMC1Q96RL1 719 aa8.86□□□□□ -0.99
USPL1-201ENST00000255304 ORC3Q9UBD5 711 aaPredicted RBP8.86□□□□□ -0.99
USPL1-201ENST00000255304 WNK3Q9BYP7 1800 aa8.86□□□□□ -0.99
USPL1-201ENST00000255304 SERPINC1P01008 464 aa8.86□□□□□ -0.99
USPL1-201ENST00000255304 CREB3L3Q68CJ9 461 aa8.86□□□□□ -0.99
USPL1-201ENST00000255304 PI16Q6UXB8 463 aa8.86□□□□□ -0.99
USPL1-201ENST00000255304 COL5A2P05997 1499 aaPredicted RBP8.85□□□□□ -0.99
USPL1-201ENST00000255304 A0A1B0GUL7 405 aa8.85□□□□□ -0.99
USPL1-201ENST00000255304 DHX37Q8IY37 1157 aaKnown RBP8.85□□□□□ -0.99
USPL1-201ENST00000255304 TRIM22Q8IYM9 498 aa8.85□□□□□ -0.99
USPL1-201ENST00000255304 NRBP1Q9UHY1 535 aa8.85□□□□□ -0.99
USPL1-201ENST00000255304 ASAP1Q9ULH1 1129 aa8.85□□□□□ -0.99
USPL1-201ENST00000255304 ZDHHC9Q9Y397 364 aa8.85□□□□□ -0.99
USPL1-201ENST00000255304 IRS4O14654 1257 aaPredicted RBP8.85□□□□□ -0.99
USPL1-201ENST00000255304 SYT1P21579 422 aa8.85□□□□□ -0.99
USPL1-201ENST00000255304 DDIT3P35638 169 aa8.85□□□□□ -0.99
USPL1-201ENST00000255304 FAM98CQ17RN3 349 aaKnown RBP8.85□□□□□ -0.99
USPL1-201ENST00000255304 DCAF5Q96JK2 942 aa8.85□□□□□ -0.99
USPL1-201ENST00000255304 GNL3LQ9NVN8 582 aaKnown RBP8.85□□□□□ -0.99
USPL1-201ENST00000255304 JAK2O60674 1132 aa8.85□□□□□ -0.99
USPL1-201ENST00000255304 MAP3K11Q16584 847 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms