RNA–Protein interactions for RNA: ENST00000224721.10

CDH23-201, Transcript of cadherin related 23, humanhuman

APPRIS P5 TSL 5 BASIC

Gene CDH23, Length 11,139 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-201ENST00000224721 TSHZ3Q63HK5 1081 aa16.32■□□□□ 0.2
CDH23-201ENST00000224721 SYT10Q6XYQ8 523 aa16.32■□□□□ 0.2
CDH23-201ENST00000224721 NEK11Q8NG66 645 aa16.32■□□□□ 0.2
CDH23-201ENST00000224721 TXNDC16Q9P2K2 825 aa16.32■□□□□ 0.2
CDH23-201ENST00000224721 SAMM50Q9Y512 469 aa16.32■□□□□ 0.2
CDH23-201ENST00000224721 PPFIA3O75145 1194 aa16.31■□□□□ 0.2
CDH23-201ENST00000224721 ERCC6LQ2NKX8 1250 aa16.31■□□□□ 0.2
CDH23-201ENST00000224721 GKAP1Q5VSY0 366 aaPredicted RBP16.31■□□□□ 0.2
CDH23-201ENST00000224721 ZNF444Q8N0Y2 327 aaPredicted RBP16.31■□□□□ 0.2
CDH23-201ENST00000224721 IFNKQ9P0W0 207 aa16.31■□□□□ 0.2
CDH23-201ENST00000224721 A6NNZ2 444 aa16.31■□□□□ 0.2
CDH23-201ENST00000224721 TUBB8Q3ZCM7 444 aa16.31■□□□□ 0.2
CDH23-201ENST00000224721 THUMPD2Q9BTF0 503 aaKnown RBP16.31■□□□□ 0.2
CDH23-201ENST00000224721 ERCC3P19447 782 aa16.31■□□□□ 0.2
CDH23-201ENST00000224721 USP37Q86T82 979 aa16.31■□□□□ 0.2
CDH23-201ENST00000224721 CNGA4Q8IV77 575 aa16.31■□□□□ 0.2
CDH23-201ENST00000224721 GBP5Q96PP8 586 aa16.31■□□□□ 0.2
CDH23-201ENST00000224721 KIAA1524Q8TCG1 905 aa16.31■□□□□ 0.2
CDH23-201ENST00000224721 KIF14Q15058 1648 aa16.31■□□□□ 0.2
CDH23-201ENST00000224721 NDC80O14777 642 aa16.31■□□□□ 0.2
CDH23-201ENST00000224721 RAB11FIP4Q86YS3 637 aa16.31■□□□□ 0.2
CDH23-201ENST00000224721 TOM1L2Q6ZVM7 507 aa16.31■□□□□ 0.2
CDH23-201ENST00000224721 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.31■□□□□ 0.2
CDH23-201ENST00000224721 BAZ2BQ9UIF8 2168 aaKnown RBP16.3■□□□□ 0.2
CDH23-201ENST00000224721 HAND2P61296 217 aa16.3■□□□□ 0.2
CDH23-201ENST00000224721 TLDC2A0PJX2 215 aa16.3■□□□□ 0.2
CDH23-201ENST00000224721 NCOA7Q8NI08 942 aa16.3■□□□□ 0.2
CDH23-201ENST00000224721 DAPK1P53355 1430 aa16.3■□□□□ 0.2
CDH23-201ENST00000224721 HSPA1LP34931 641 aa16.3■□□□□ 0.2
CDH23-201ENST00000224721 NUCB1Q02818 461 aa16.3■□□□□ 0.2
CDH23-201ENST00000224721 ARAP1Q96P48 1450 aa16.3■□□□□ 0.2
CDH23-201ENST00000224721 MARCKSP29966 332 aaPredicted RBP16.3■□□□□ 0.2
CDH23-201ENST00000224721 BICDL2A1A5D9 508 aa16.3■□□□□ 0.2
CDH23-201ENST00000224721 ECHDC1Q9NTX5 307 aa16.3■□□□□ 0.2
CDH23-201ENST00000224721 DNM1Q05193 864 aaKnown RBP16.3■□□□□ 0.2
CDH23-201ENST00000224721 LRCH2Q5VUJ6 765 aa16.3■□□□□ 0.2
CDH23-201ENST00000224721 MYH9P35579 1960 aaKnown RBP16.29■□□□□ 0.2
CDH23-201ENST00000224721 PPP1R1BQ9UD71 204 aaPredicted RBP16.29■□□□□ 0.2
CDH23-201ENST00000224721 PCF11O94913 1555 aaKnown RBP16.29■□□□□ 0.2
CDH23-201ENST00000224721 ZNF131P52739 623 aa16.29■□□□□ 0.2
CDH23-201ENST00000224721 FMNL3Q8IVF7 1028 aa16.29■□□□□ 0.2
CDH23-201ENST00000224721 ARHGEF2Q92974 986 aaKnown RBP16.29■□□□□ 0.2
CDH23-201ENST00000224721 GPR161Q8N6U8 529 aaKnown RBP16.29■□□□□ 0.2
CDH23-201ENST00000224721 MYCBPQ99417 103 aaPredicted RBP16.29■□□□□ 0.2
CDH23-201ENST00000224721 DACT1Q9NYF0 836 aa16.29■□□□□ 0.2
CDH23-201ENST00000224721 ZNF652Q9Y2D9 606 aa16.29■□□□□ 0.2
CDH23-201ENST00000224721 SLF2Q8IX21 1173 aa16.29■□□□□ 0.2
CDH23-201ENST00000224721 GOLGA6BA6NDN3 693 aa16.28■□□□□ 0.2
CDH23-201ENST00000224721 PLCB3Q01970 1234 aa16.28■□□□□ 0.2
CDH23-201ENST00000224721 ATP6V0A2Q9Y487 856 aa16.28■□□□□ 0.2
CDH23-201ENST00000224721 PDE4BQ07343 736 aa16.28■□□□□ 0.2
CDH23-201ENST00000224721 CCDC122Q5T0U0 273 aa16.28■□□□□ 0.2
CDH23-201ENST00000224721 STARD3NLO95772 234 aa16.28■□□□□ 0.2
CDH23-201ENST00000224721 NEK1Q96PY6 1258 aa16.28■□□□□ 0.2
CDH23-201ENST00000224721 TCHPQ9BT92 498 aa16.28■□□□□ 0.2
CDH23-201ENST00000224721 CRCPO75575 148 aa16.28■□□□□ 0.2
CDH23-201ENST00000224721 F13A1P00488 732 aa16.28■□□□□ 0.2
CDH23-201ENST00000224721 ELF2Q15723 593 aa16.28■□□□□ 0.2
CDH23-201ENST00000224721 UTP11Q9Y3A2 253 aaKnown RBP16.28■□□□□ 0.2
CDH23-201ENST00000224721 SH3BP5O60239 455 aa16.28■□□□□ 0.2
CDH23-201ENST00000224721 CCDC26Q8TAB7 109 aa16.28■□□□□ 0.2
CDH23-201ENST00000224721 SYNJ1O43426 1573 aa16.28■□□□□ 0.2
CDH23-201ENST00000224721 CCDC8Q9H0W5 538 aaPredicted RBP16.28■□□□□ 0.2
CDH23-201ENST00000224721 RAB3GAP1Q15042 981 aa16.28■□□□□ 0.2
CDH23-201ENST00000224721 NECAB1Q8N987 351 aa16.28■□□□□ 0.2
CDH23-201ENST00000224721 KAT14Q9H8E8 782 aa16.28■□□□□ 0.2
CDH23-201ENST00000224721 SNX16P57768 344 aa16.27■□□□□ 0.2
CDH23-201ENST00000224721 SEL1L2Q5TEA6 688 aa16.27■□□□□ 0.2
CDH23-201ENST00000224721 ARHGAP24Q8N264 748 aa16.27■□□□□ 0.2
CDH23-201ENST00000224721 DDX27Q96GQ7 796 aaKnown RBP16.27■□□□□ 0.2
CDH23-201ENST00000224721 CADPSQ9ULU8 1353 aa16.27■□□□□ 0.2
CDH23-201ENST00000224721 PPP1R9BQ96SB3 815 aa16.27■□□□□ 0.2
CDH23-201ENST00000224721 NAPGQ99747 312 aaPredicted RBP16.27■□□□□ 0.2
CDH23-201ENST00000224721 GIGYF1O75420 1035 aaPredicted RBP16.27■□□□□ 0.2
CDH23-201ENST00000224721 U2AF2P26368 475 aaKnown RBP eCLIP16.27■□□□□ 0.2
CDH23-201ENST00000224721 CALCOCO2Q13137 446 aa16.27■□□□□ 0.2
CDH23-201ENST00000224721 BAG1Q99933 345 aaPredicted RBP16.27■□□□□ 0.19
CDH23-201ENST00000224721 SYNJ2O15056 1496 aa16.27■□□□□ 0.19
CDH23-201ENST00000224721 TCHHQ07283 1943 aa16.27■□□□□ 0.19
CDH23-201ENST00000224721 EIF2AK4Q9P2K8 1649 aaKnown RBP16.27■□□□□ 0.19
CDH23-201ENST00000224721 GCKP35557 465 aa16.27■□□□□ 0.19
CDH23-201ENST00000224721 PAXIP1Q6ZW49 1069 aaPredicted RBP16.27■□□□□ 0.19
CDH23-201ENST00000224721 UAP1Q16222 522 aaPredicted RBP16.26■□□□□ 0.19
CDH23-201ENST00000224721 MYD88Q99836 296 aa16.26■□□□□ 0.19
CDH23-201ENST00000224721 RTN1Q16799 776 aa16.26■□□□□ 0.19
CDH23-201ENST00000224721 MYRIPQ8NFW9 859 aa16.26■□□□□ 0.19
CDH23-201ENST00000224721 VPS52Q8N1B4 723 aa16.26■□□□□ 0.19
CDH23-201ENST00000224721 ZNF354CQ86Y25 554 aa16.26■□□□□ 0.19
CDH23-201ENST00000224721 AKR1B15C9JRZ8 316 aaPredicted RBP16.26■□□□□ 0.19
CDH23-201ENST00000224721 I3L4J1 428 aa16.26■□□□□ 0.19
CDH23-201ENST00000224721 ZNF692Q9BU19 519 aaPredicted RBP16.26■□□□□ 0.19
CDH23-201ENST00000224721 CLUL1Q15846 466 aa16.26■□□□□ 0.19
CDH23-201ENST00000224721 SNX21Q969T3 373 aa16.26■□□□□ 0.19
CDH23-201ENST00000224721 MAK16Q9BXY0 300 aaKnown RBP16.26■□□□□ 0.19
CDH23-201ENST00000224721 MTUS1Q9ULD2 1270 aa16.26■□□□□ 0.19
CDH23-201ENST00000224721 IFT20Q8IY31 132 aa16.26■□□□□ 0.19
CDH23-201ENST00000224721 STMN1P16949 149 aa16.25■□□□□ 0.19
CDH23-201ENST00000224721 PNMA8AQ86V59 439 aaPredicted RBP16.25■□□□□ 0.19
CDH23-201ENST00000224721 PFDN4Q9NQP4 134 aa16.25■□□□□ 0.19
CDH23-201ENST00000224721 RNF10Q8N5U6 811 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms