RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Ccdc162pQ0VG85 912 aa10.5□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Ctdp1Q7TSG2 960 aa10.5□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Skor1Q8BX46 964 aa10.5□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Slc39a6Q8C145 765 aa10.5□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Ampd3O08739 766 aa10.49□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Hoxc9P09633 260 aa10.49□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Chmp6P0C0A3 200 aa10.49□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Rab3il1Q8VDV3 383 aa10.49□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Ptch1Q61115 1434 aa10.49□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Astn2Q80Z10 1352 aa10.49□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Setd1aE9PYH6 1716 aa10.49□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Fam107bQ3TGF2 131 aa10.49□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Ano8Q6PB70 1060 aa10.49□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Stk36Q69ZM6 1316 aa10.49□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Kmt5bQ3U8K7 883 aa10.49□□□□□ -0.73
Scn8a-213ENSMUST00000201549 LarsQ8BMJ2 1178 aa10.49□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Rbm17Q8JZX4 405 aaKnown RBP10.49□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Amotl1Q9D4H4 968 aa10.49□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Mtx1P47802 317 aa10.49□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Kank4Q6P9J5 1016 aa10.49□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Prkab2Q6PAM0 271 aa10.49□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Triml1Q8BVP1 470 aa10.49□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Brd3Q8K2F0 726 aaKnown RBP10.49□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Krt23Q99PS0 422 aa10.49□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Cpsf2O35218 782 aaKnown RBP10.48□□□□□ -0.73
Scn8a-213ENSMUST00000201549 FanccP50652 591 aa10.48□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Bach2P97303 839 aa10.48□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Tmem266Q8BZB3 538 aa10.48□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Ctage5Q8R311 779 aa10.48□□□□□ -0.73
Scn8a-213ENSMUST00000201549 P2rx7Q9Z1M0 595 aa10.48□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Nek11Q8C0Q4 628 aa10.48□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Ppp4r4Q8C0Y0 875 aa10.48□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Antxr1Q9CZ52 562 aa10.48□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Psmc4P54775 418 aa10.48□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Ctnna2Q61301 953 aa10.48□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Ctr9Q62018 1173 aaKnown RBP10.48□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Farp2Q91VS8 1065 aa10.48□□□□□ -0.73
Scn8a-213ENSMUST00000201549 4933428M09RikQ9D3X3 192 aa10.48□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Epb41l3Q9WV92 929 aa10.48□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Timm10P62073 90 aa10.48□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Psmb7P70195 277 aa10.48□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Ercc6lQ8BHK9 1240 aa10.48□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Cep131Q62036 1060 aa10.48□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Rbm33Q9CXK9 1231 aaKnown RBP10.48□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Rbm26Q6NZN0 1012 aaKnown RBP10.48□□□□□ -0.73
Scn8a-213ENSMUST00000201549 WtapQ9ER69 396 aa10.48□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Cyp4f39Q8BGU0 532 aa10.47□□□□□ -0.73
Scn8a-213ENSMUST00000201549 NsmfQ99NF2 532 aa10.47□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Tulp4Q9JIL5 1547 aa10.47□□□□□ -0.73
Scn8a-213ENSMUST00000201549 NmiO35309 314 aa10.47□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Irx4Q9QY61 515 aa10.47□□□□□ -0.73
Scn8a-213ENSMUST00000201549 AnkarA2RT91 1465 aa10.47□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Ncapd2Q8K2Z4 1392 aa10.47□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Stx8O88983 236 aa10.47□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Prl7a2O54831 253 aa10.47□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Myo1bP46735 1107 aa10.47□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Lrrfip1Q3UZ39 729 aaKnown RBP10.47□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Bbof1Q3V079 533 aa10.47□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Vps37cQ8R105 352 aa10.47□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Nip7Q9CXK8 180 aaKnown RBP10.47□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Spata17Q9D552 379 aa10.47□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Ttc41Q692V3 1318 aa10.47□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Ift88Q61371 824 aa10.47□□□□□ -0.73
Scn8a-213ENSMUST00000201549 RragbQ6NTA4 374 aa10.47□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Fermt2Q8CIB5 680 aa10.47□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Tmco4Q91WU4 631 aa10.47□□□□□ -0.73
Scn8a-213ENSMUST00000201549 DonsonQ9QXP4 560 aa10.47□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Atp8b3Q6UQ17 1335 aa10.47□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Mroh2aD3Z750 1679 aa10.47□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Aimp1P31230 310 aaKnown RBP10.46□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Tspyl3Q3UYP3 334 aa10.46□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Ccdc172Q810N9 267 aa10.46□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Rnf41Q8BH75 317 aa10.46□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Elf2Q9JHC9 593 aa10.46□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Myo3aQ8K3H5 1613 aa10.46□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Ppp1r1bQ60829 194 aa10.46□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Luc7l2Q7TNC4 392 aaKnown RBP10.46□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Dhx38Q80X98 1228 aa10.46□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Znf568E9PYI1 671 aa10.46□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Tlr7P58681 1050 aa10.46□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Zfp51Q3U4L8 781 aa10.46□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Ppfibp2O35711 882 aa10.46□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Api5O35841 504 aaKnown RBP10.46□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Zscan22Q8BGS5 496 aa10.46□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Kiaa1551Q5DTW7 1521 aa10.46□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Epb41l2O70318 988 aaKnown RBP10.46□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Slc4a4O88343 1079 aa10.46□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Myl3P09542 204 aa10.46□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Usp5P56399 858 aaKnown RBP10.46□□□□□ -0.74
Scn8a-213ENSMUST00000201549 TrhQ62361 256 aa10.46□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Cdca7lQ922M5 438 aa10.46□□□□□ -0.74
Scn8a-213ENSMUST00000201549 4921530L21RikQ9CQ47 274 aa10.46□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Slc7a3P70423 618 aa10.46□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Trim28Q62318 834 aa10.46□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Ppp4r3aQ6P2K6 820 aa10.46□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Zmynd15Q8C0R7 736 aa10.46□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Bzw2Q91VK1 419 aaKnown RBP10.46□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Tbc1d8bA3KGB4 1114 aa10.45□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Cep63Q3UPP8 700 aa10.45□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Ice2Q3UZ18 988 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 26.1 ms