RNA–Protein interactions for RNA: ENSMUST00000172269.1

Sptbn4-207, Transcript of Spectrin beta chain, mousemouse

APPRIS ALT2 TSL 2 BASIC

Gene Sptbn4, Length 8,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-207ENSMUST00000172269 Smc5Q8CG46 1101 aaKnown RBP20.96■□□□□ 0.95
Sptbn4-207ENSMUST00000172269 Prr16A3KMN5 304 aa20.96■□□□□ 0.95
Sptbn4-207ENSMUST00000172269 HomezQ80W88 542 aa20.96■□□□□ 0.95
Sptbn4-207ENSMUST00000172269 DlatQ8BMF4 642 aa20.96■□□□□ 0.95
Sptbn4-207ENSMUST00000172269 Bbs5Q9CZQ9 341 aa20.96■□□□□ 0.95
Sptbn4-207ENSMUST00000172269 Fam50bQ9WTJ8 334 aa20.96■□□□□ 0.95
Sptbn4-207ENSMUST00000172269 Ccdc157Q5SPX1 718 aa20.96■□□□□ 0.95
Sptbn4-207ENSMUST00000172269 Taf12Q8VE65 161 aa20.96■□□□□ 0.95
Sptbn4-207ENSMUST00000172269 RarsQ9D0I9 660 aaKnown RBP20.96■□□□□ 0.95
Sptbn4-207ENSMUST00000172269 Dnm1P39053 867 aa20.95■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Irf9Q61179 399 aa20.95■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Gnat2P50149 354 aa20.95■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Hirip3Q8BLH7 601 aa20.95■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Sugp2Q8CH09 1067 aa20.95■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Atp2b1G5E829 1220 aa20.95■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 St5Q924W7 1134 aa20.95■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Atp6v0a4Q920R6 833 aa20.94■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Asic1Q6NXK8 526 aa20.94■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Nap1l4Q78ZA7 375 aaKnown RBP20.94■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Cyp4f39Q8BGU0 532 aa20.94■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Maip1Q8BHE8 291 aa20.94■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Synpo2Q91YE8 1087 aaKnown RBP20.94■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Ccdc89Q9DA73 370 aa20.94■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Gna11P21278 359 aa20.94■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 ParvgQ9ERD8 331 aa20.94■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Ankle2Q6P1H6 964 aa20.94■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Rad50P70388 1312 aa20.94■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Ctdp1Q7TSG2 960 aa20.93■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 NsmfQ99NF2 532 aa20.93■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 LlphQ9D945 130 aaKnown RBP20.93■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Stx8O88983 236 aa20.93■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Rbm26Q6NZN0 1012 aaKnown RBP20.93■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Pih1h3bQ8C6P5 218 aa20.93■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Sh2b1Q91ZM2 756 aa20.93■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Drc3Q9D5E4 523 aa20.93■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Amotl1Q9D4H4 968 aa20.93■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Tbc1d9Q3UYK3 1264 aa20.93■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 VeztQ3ZK22 780 aa20.93■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Dpf1Q9QX66 387 aa20.93■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Ift20Q61025 132 aa20.93■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Xrcc4Q924T3 326 aa20.93■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Urb2E9Q7L1 1524 aaKnown RBP20.93■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Ppfia1B2RXQ2 1266 aa20.93■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Slc14a2Q8R4T9 930 aa20.93■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 CacybpQ9CXW3 229 aa20.93■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Q3TYL0 343 aa20.92■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Trove2O08848 538 aa20.92■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Tcerg1lQ3B807 590 aa20.92■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Igbp1Q61249 340 aa20.92■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Hmgb3O54879 200 aaKnown RBP20.92■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 VimP20152 466 aaKnown RBP20.92■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Ltv1Q6NSQ7 470 aaKnown RBP20.92■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Dnajc8Q6NZB0 253 aaKnown RBP20.92■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Adcy3Q8VHH7 1145 aa20.92■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Tbc1d8Q9Z1A9 1134 aa20.92■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Gm2030D3Z7C4 212 aa20.92■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Cnga4Q3UW12 575 aa20.92■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Rab34Q64008 259 aa20.92■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Asic3Q6X1Y6 530 aa20.92■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Rasa1E9PYG6 1038 aa20.91■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Rsph3bQ9DA80 389 aa20.91■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Dnajc21E9Q8D0 531 aa20.91■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 RilpQ5ND29 369 aa20.91■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Exoc3Q6KAR6 755 aa20.91■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Nol11Q8BJW5 723 aaKnown RBP20.91■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Rab44Q8CB87 725 aa20.91■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Stx12Q9ER00 274 aa20.91■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Kif21bQ9QXL1 1668 aa20.91■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Cyp7a1Q64505 503 aa20.91■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Fam163aQ8CAA5 168 aa20.91■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 ZfaP23607 742 aa20.91■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Syt10Q9R0N4 523 aa20.91■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Kif1bQ60575 1816 aaKnown RBP20.91■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Zhx1P70121 873 aa20.91■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 SynmQ70IV5 1561 aa20.91■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Lin9Q8C735 542 aa20.9■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Pdcd6ipQ9WU78 869 aaKnown RBP20.9■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Plekhg2Q6KAU7 1340 aa20.9■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 SarnpQ9D1J3 210 aaKnown RBP20.9■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Zbtb16Q3UQ17 673 aa20.9■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 U2af1l4Q8BGJ9 220 aa20.9■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Ccdc13D3YV10 709 aa20.9■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Sun3Q5SS91 320 aa20.9■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Satb1Q60611 764 aa20.9■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Myo6Q64331 1265 aa20.9■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Trim7Q923T7 510 aa20.9■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Sept3Q9Z1S5 350 aa20.9■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 MarcksP26645 309 aaKnown RBP20.9■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Gm6583E9Q8Z1 469 aa20.89■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Cabp5Q9JLK3 173 aa20.89■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Becn2P0DM65 447 aa20.89■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Cdr2P97817 455 aa20.89■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Ccdc113Q8C5T8 377 aa20.89■□□□□ 0.94
Sptbn4-207ENSMUST00000172269 Parp10Q8CIE4 960 aa20.89■□□□□ 0.93
Sptbn4-207ENSMUST00000172269 KaznQ69ZS8 779 aa20.89■□□□□ 0.93
Sptbn4-207ENSMUST00000172269 Lrrc74aA0A1Y7VMD6 494 aa20.89■□□□□ 0.93
Sptbn4-207ENSMUST00000172269 Kdm1aQ6ZQ88 853 aa20.89■□□□□ 0.93
Sptbn4-207ENSMUST00000172269 Terf2O35144 541 aa20.88■□□□□ 0.93
Sptbn4-207ENSMUST00000172269 Mcm10Q0VBD2 885 aa20.88■□□□□ 0.93
Sptbn4-207ENSMUST00000172269 Slf2Q6P9P0 1278 aa20.88■□□□□ 0.93
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms