RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 TsksO54887 585 aa18.37■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Cyp19a1P28649 503 aa18.37■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Plcb3P51432 1234 aaKnown RBP18.37■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Tmem109Q3UBX0 243 aa18.37■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Spty2d1Q68FG3 682 aa18.37■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Gnl3lQ6PGG6 577 aaKnown RBP18.37■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Tex2Q6ZPJ0 1128 aaKnown RBP18.37■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Pes1Q9EQ61 584 aaKnown RBP18.37■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Kansl3A2RSY1 903 aaKnown RBP18.37■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Ercc3P49135 783 aa18.37■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Gm29094F6Q785 221 aa18.35■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Atp8a2P98200 1148 aa18.35■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Rab3gap1Q80UJ7 981 aa18.35■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Map10Q8BJS7 891 aa18.35■□□□□ 0.53
Sdc1-205ENSMUST00000171158 ApobrQ8VBT6 942 aa18.35■□□□□ 0.53
Sdc1-205ENSMUST00000171158 MthfsQ9D110 203 aa18.35■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Ccne2Q9Z238 404 aa18.35■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Sik3Q6P4S6 1311 aa18.35■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Casz1Q9CWL2 1761 aa18.35■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Ppfia3P60469 1194 aa18.35■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Pald1P70261 859 aa18.35■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Ncbp1Q3UYV9 790 aaKnown RBP18.35■□□□□ 0.53
Sdc1-205ENSMUST00000171158 TrhQ62361 256 aa18.35■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Zkscan8Q8BSL0 588 aa18.35■□□□□ 0.53
Sdc1-205ENSMUST00000171158 IncenpQ9WU62 880 aa18.35■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Aox4Q3TYQ9 1336 aa18.35■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Ccdc112A0AUP1 442 aa18.34■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Gpr182P43142 395 aa18.34■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Hand2Q61039 217 aa18.34■□□□□ 0.53
Sdc1-205ENSMUST00000171158 BcanQ61361 883 aa18.34■□□□□ 0.53
Sdc1-205ENSMUST00000171158 GptQ8QZR5 496 aa18.34■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Appbp2Q9DAX9 585 aa18.34■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Osbpl5Q9ER64 874 aa18.34■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Hmgn5Q9JL35 406 aa18.34■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Col3a1P08121 1464 aa18.34■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Tpm3P21107 285 aaKnown RBP18.34■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Inpp5bQ8K337 993 aa18.34■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Alg3Q8K2A8 438 aa18.33■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Wdr78E9PYY5 807 aa18.33■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Anxa1P10107 346 aaKnown RBP18.33■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Fam160b2Q80YR2 744 aa18.33■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Nop14Q8R3N1 860 aaKnown RBP18.33■□□□□ 0.52
Sdc1-205ENSMUST00000171158 DmtnQ9WV69 405 aa18.33■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Wdr19Q3UGF1 1341 aa18.33■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Sall1Q9ER74 1322 aa18.33■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Ssc5dQ8BV57 1371 aa18.33■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Nucb2P81117 420 aa18.32■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Atp2b3Q0VF55 1220 aa18.32■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Cdca8Q8BHX3 289 aa18.32■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Vmn2r23E9PXI5 849 aa18.32■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Ptgs1P22437 602 aa18.32■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Ccdc82Q6PG04 518 aa18.32■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Smim5Q8BT42 78 aa18.32■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Kcnq5Q9JK45 933 aa18.32■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Myh1Q5SX40 1942 aa18.31■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Ankrd31A0A140LI88 1765 aa18.31■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Ubn2Q80WC1 1314 aa18.31■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Hap1O35668 628 aa18.31■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Clec11aO88200 328 aa18.31■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Tmem59lQ7TNI2 337 aa18.31■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Rtn4Q99P72 1162 aaKnown RBP18.31■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Nip7Q9CXK8 180 aaKnown RBP18.31■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Tbc1d8Q9Z1A9 1134 aa18.31■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Hdac6Q9Z2V5 1149 aa18.31■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Kcnh4A2A5F7 1018 aa18.31■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Cavin1O54724 392 aa18.31■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Edrf1Q6GQV7 1239 aa18.31■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Rps6ka5Q8C050 863 aa18.31■□□□□ 0.52
Sdc1-205ENSMUST00000171158 ImmtQ8CAQ8 757 aaKnown RBP18.31■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Terf2ipQ91VL8 393 aa18.31■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Snw1Q9CSN1 536 aaKnown RBP18.31■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Col4a3bpQ9EQG9 624 aa18.31■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Lrp5Q91VN0 1614 aa18.3■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Kif3aP28741 701 aa18.3■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Rrp1P56183 494 aaKnown RBP18.3■□□□□ 0.52
Sdc1-205ENSMUST00000171158 LyarQ08288 388 aaKnown RBP18.3■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Tsen34Q8BMZ5 316 aa18.3■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Pcdhb15Q91Y04 786 aa18.3■□□□□ 0.52
Sdc1-205ENSMUST00000171158 MetP16056 1379 aa18.3■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Ubxn4Q8VCH8 506 aa18.29■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Lrp6O88572 1613 aa18.29■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Cops6O88545 324 aa18.29■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Hook1Q8BIL5 728 aa18.29■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Marf1Q8BJ34 1730 aaKnown RBP18.29■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Il17raQ60943 864 aa18.28■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Atp1a3Q6PIC6 1013 aa18.28■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Dcaf5Q80T85 946 aa18.28■□□□□ 0.52
Sdc1-205ENSMUST00000171158 U2af1l4Q8BGJ9 220 aa18.28■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Gpatch3Q8BIY1 525 aa18.28■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Cep55Q8BT07 462 aa18.28■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Emilin1Q99K41 1017 aa18.28■□□□□ 0.52
Sdc1-205ENSMUST00000171158 CebpzP53569 1052 aaKnown RBP18.28■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Zbtb38Q3LR78 1197 aa18.28■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Kcnq3Q8K3F6 873 aa18.28■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Naa16Q9DBB4 864 aa18.28■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Ube3bQ9ES34 1070 aa18.28■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Cfap99A0A140LIX9 648 aa18.27■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Cyp2d9P11714 504 aa18.27■□□□□ 0.52
Sdc1-205ENSMUST00000171158 ErmnQ5EBJ4 281 aa18.27■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Nlrp9aQ66X03 949 aa18.27■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms