RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Ppfia3P60469 1194 aa15.1■□□□□ 0.01
Nup88-203ENSMUST00000108531 Cbx1P83917 185 aaKnown RBP15.1■□□□□ 0.01
Nup88-203ENSMUST00000108531 Gsdma2Q32M21 443 aa15.1■□□□□ 0.01
Nup88-203ENSMUST00000108531 Dhx40Q6PE54 779 aaKnown RBP15.1■□□□□ 0.01
Nup88-203ENSMUST00000108531 Tmem266Q8BZB3 538 aa15.1■□□□□ 0.01
Nup88-203ENSMUST00000108531 Rbm17Q8JZX4 405 aaKnown RBP15.1■□□□□ 0.01
Nup88-203ENSMUST00000108531 Naa16Q9DBB4 864 aa15.1■□□□□ 0.01
Nup88-203ENSMUST00000108531 Tcof1O08784 1320 aaKnown RBP15.09■□□□□ 0.01
Nup88-203ENSMUST00000108531 Zscan29E9Q5B4 869 aa15.09■□□□□ 0.01
Nup88-203ENSMUST00000108531 Atp2b1G5E829 1220 aa15.09■□□□□ 0.01
Nup88-203ENSMUST00000108531 Kiaa0753Q6A000 959 aa15.09■□□□□ 0.01
Nup88-203ENSMUST00000108531 Ccdc82Q6PG04 518 aa15.09■□□□□ 0.01
Nup88-203ENSMUST00000108531 Slc5a1Q8C3K6 665 aa15.09■□□□□ 0.01
Nup88-203ENSMUST00000108531 Cfap99A0A140LIX9 648 aa15.09■□□□□ 0.01
Nup88-203ENSMUST00000108531 Cyp2d34L7N463 504 aa15.09■□□□□ 0.01
Nup88-203ENSMUST00000108531 LyarQ08288 388 aaKnown RBP15.09■□□□□ 0.01
Nup88-203ENSMUST00000108531 Zkscan4Q5SZT6 480 aa15.09■□□□□ 0.01
Nup88-203ENSMUST00000108531 Ube2oQ6ZPJ3 1288 aa15.09■□□□□ 0.01
Nup88-203ENSMUST00000108531 Asap2Q7SIG6 958 aa15.09■□□□□ 0.01
Nup88-203ENSMUST00000108531 Arid5bQ8BM75 1188 aaKnown RBP15.09■□□□□ 0.01
Nup88-203ENSMUST00000108531 Tmem67Q8BR76 992 aa15.09■□□□□ 0.01
Nup88-203ENSMUST00000108531 Smc4Q8CG47 1286 aa15.09■□□□□ 0.01
Nup88-203ENSMUST00000108531 Hnrnpul1Q8VDM6 859 aaKnown RBP15.09■□□□□ 0.01
Nup88-203ENSMUST00000108531 Cnpy2Q9QXT0 182 aa15.09■□□□□ 0.01
Nup88-203ENSMUST00000108531 AK157302I3ITR1 129 aa15.08■□□□□ 0.01
Nup88-203ENSMUST00000108531 Mctp2Q5RJH2 878 aa15.08■□□□□ 0.01
Nup88-203ENSMUST00000108531 IbspQ61711 324 aa15.08■□□□□ 0.01
Nup88-203ENSMUST00000108531 Ltv1Q6NSQ7 470 aaKnown RBP15.08■□□□□ 0.01
Nup88-203ENSMUST00000108531 Q8BZJ8 459 aa15.08■□□□□ 0.01
Nup88-203ENSMUST00000108531 Golph3lQ8R088 285 aaKnown RBP15.08■□□□□ 0.01
Nup88-203ENSMUST00000108531 Terf2ipQ91VL8 393 aa15.08■□□□□ 0.01
Nup88-203ENSMUST00000108531 Isca1Q9D924 129 aa15.08■□□□□ 0.01
Nup88-203ENSMUST00000108531 Ehd4Q9EQP2 541 aa15.08■□□□□ 0.01
Nup88-203ENSMUST00000108531 Casz1Q9CWL2 1761 aa15.08■□□□□ 0.01
Nup88-203ENSMUST00000108531 Col4a1P02463 1669 aa15.08■□□□□ 0
Nup88-203ENSMUST00000108531 Card6E9PWH2 1175 aa15.08■□□□□ 0
Nup88-203ENSMUST00000108531 Spty2d1Q68FG3 682 aa15.08■□□□□ 0
Nup88-203ENSMUST00000108531 Srek1Q8BZX4 494 aaKnown RBP15.08■□□□□ 0
Nup88-203ENSMUST00000108531 Wdr19Q3UGF1 1341 aa15.07■□□□□ 0
Nup88-203ENSMUST00000108531 Gm29094F6Q785 221 aa15.07■□□□□ 0
Nup88-203ENSMUST00000108531 Myd88P22366 296 aa15.07■□□□□ 0
Nup88-203ENSMUST00000108531 Cep135Q6P5D4 1140 aa15.07■□□□□ 0
Nup88-203ENSMUST00000108531 Trim56Q80VI1 734 aaKnown RBP15.07■□□□□ 0
Nup88-203ENSMUST00000108531 Ciao1Q99KN2 339 aa15.07■□□□□ 0
Nup88-203ENSMUST00000108531 Ppil4Q9CXG3 492 aaKnown RBP15.07■□□□□ 0
Nup88-203ENSMUST00000108531 MthfsQ9D110 203 aa15.07■□□□□ 0
Nup88-203ENSMUST00000108531 Speer4bQ9D9F7 267 aa15.07■□□□□ 0
Nup88-203ENSMUST00000108531 Telo2Q9DC40 840 aaKnown RBP15.07■□□□□ 0
Nup88-203ENSMUST00000108531 Carmil3Q3UFQ8 1375 aa15.07■□□□□ 0
Nup88-203ENSMUST00000108531 Sall1Q9ER74 1322 aa15.07■□□□□ 0
Nup88-203ENSMUST00000108531 U2af2P26369 475 aaKnown RBP15.07■□□□□ 0
Nup88-203ENSMUST00000108531 RgmbQ7TQ33 436 aa15.07■□□□□ 0
Nup88-203ENSMUST00000108531 Ltb4r2Q9JJL9 360 aa15.07■□□□□ 0
Nup88-203ENSMUST00000108531 Cdc45Q9Z1X9 566 aa15.07■□□□□ 0
Nup88-203ENSMUST00000108531 Slc4a1P04919 929 aa15.06■□□□□ 0
Nup88-203ENSMUST00000108531 Tiam2Q6ZPF3 1715 aa15.06■□□□□ 0
Nup88-203ENSMUST00000108531 Dhx30Q99PU8 1217 aaKnown RBP15.06■□□□□ 0
Nup88-203ENSMUST00000108531 Ercc3P49135 783 aa15.06■□□□□ 0
Nup88-203ENSMUST00000108531 Ddx17Q501J6 650 aaKnown RBP15.06■□□□□ 0
Nup88-203ENSMUST00000108531 TfrcQ62351 763 aaKnown RBP15.06■□□□□ 0
Nup88-203ENSMUST00000108531 Zfp397Q7TNK4 527 aa15.06■□□□□ 0
Nup88-203ENSMUST00000108531 U2af1l4Q8BGJ9 220 aa15.06■□□□□ 0
Nup88-203ENSMUST00000108531 Alg3Q8K2A8 438 aa15.06■□□□□ 0
Nup88-203ENSMUST00000108531 Otud6bQ8K2H2 294 aa15.06■□□□□ 0
Nup88-203ENSMUST00000108531 Ppp4r3bQ922R5 820 aa15.06■□□□□ 0
Nup88-203ENSMUST00000108531 TnksQ6PFX9 1320 aa15.05■□□□□ 0
Nup88-203ENSMUST00000108531 Pald1P70261 859 aa15.05■□□□□ 0
Nup88-203ENSMUST00000108531 Stk38Q91VJ4 465 aa15.05■□□□□ 0
Nup88-203ENSMUST00000108531 Rgs12Q8CGE9 1381 aa15.05■□□□□ 0
Nup88-203ENSMUST00000108531 Zpr1Q62384 459 aa15.05■□□□□ -0
Nup88-203ENSMUST00000108531 Fam213aQ9CYH2 218 aa15.05■□□□□ -0
Nup88-203ENSMUST00000108531 Mei1Q9D4I2 1268 aa15.05■□□□□ -0
Nup88-203ENSMUST00000108531 Fam84aQ9D650 292 aa15.05■□□□□ -0
Nup88-203ENSMUST00000108531 Tulp1Q9Z273 543 aa15.05■□□□□ -0
Nup88-203ENSMUST00000108531 Nwd2Q6P5U7 1742 aa15.04■□□□□ -0
Nup88-203ENSMUST00000108531 Vmn2r23E9PXI5 849 aa15.04■□□□□ -0
Nup88-203ENSMUST00000108531 XpcP51612 930 aa15.04■□□□□ -0
Nup88-203ENSMUST00000108531 Ap5z1Q3U829 807 aa15.04■□□□□ -0
Nup88-203ENSMUST00000108531 Hand2Q61039 217 aa15.04■□□□□ -0
Nup88-203ENSMUST00000108531 SdsQ8VBT2 327 aa15.04■□□□□ -0
Nup88-203ENSMUST00000108531 Yeats4Q9CR11 227 aaKnown RBP15.04■□□□□ -0
Nup88-203ENSMUST00000108531 Plekhd1B2RPU2 505 aa15.04■□□□□ -0
Nup88-203ENSMUST00000108531 Taf3Q5HZG4 932 aa15.04■□□□□ -0
Nup88-203ENSMUST00000108531 AbraQ8BUZ1 375 aa15.04■□□□□ -0
Nup88-203ENSMUST00000108531 Tmem87aQ8BXN9 555 aa15.04■□□□□ -0
Nup88-203ENSMUST00000108531 Shisa4Q8CA71 197 aa15.04■□□□□ -0
Nup88-203ENSMUST00000108531 Luzp1Q8R4U7 1068 aaKnown RBP15.04■□□□□ -0
Nup88-203ENSMUST00000108531 Clic4Q9QYB1 253 aa15.04■□□□□ -0
Nup88-203ENSMUST00000108531 Pramel3A2AHA7 463 aa15.03■□□□□ -0
Nup88-203ENSMUST00000108531 Gm7903A2AWL1 463 aa15.03■□□□□ -0
Nup88-203ENSMUST00000108531 AV320801A2AWL3 467 aa15.03■□□□□ -0
Nup88-203ENSMUST00000108531 Gm15023L7MUB4 467 aa15.03■□□□□ -0
Nup88-203ENSMUST00000108531 ImmtQ8CAQ8 757 aaKnown RBP15.03■□□□□ -0
Nup88-203ENSMUST00000108531 Nop2Q922K7 793 aaKnown RBP15.03■□□□□ -0
Nup88-203ENSMUST00000108531 Creld2Q9CYA0 350 aa15.03■□□□□ -0
Nup88-203ENSMUST00000108531 Sik3Q6P4S6 1311 aa15.03■□□□□ -0
Nup88-203ENSMUST00000108531 Bcl9lQ67FY2 1494 aa15.03■□□□□ -0
Nup88-203ENSMUST00000108531 Nfatc2ipO09130 412 aa15.03■□□□□ -0
Nup88-203ENSMUST00000108531 Frat1P70339 274 aa15.03■□□□□ -0
Nup88-203ENSMUST00000108531 Tmem59lQ7TNI2 337 aa15.03■□□□□ -0
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms