RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 GptQ8QZR5 496 aa13.5□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Dlg5E9Q9R9 1921 aa13.49□□□□□ -0.25
Col9a1-202ENSMUST00000088349 XpcP51612 930 aa13.49□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Q8BZJ8 459 aa13.49□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Stk38Q91VJ4 465 aa13.49□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Tbc1d7Q9D0K0 293 aa13.49□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Col4a3bpQ9EQG9 624 aa13.49□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Elf2Q9JHC9 593 aa13.49□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Nfat5Q9WV30 1534 aa13.49□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Znf568E9PYI1 671 aa13.49□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Zbtb21E9Q444 1094 aa13.49□□□□□ -0.25
Col9a1-202ENSMUST00000088349 TrdnE9Q9K5 693 aa13.49□□□□□ -0.25
Col9a1-202ENSMUST00000088349 4930572O03RikQ8C5Y0 211 aa13.49□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Luzp1Q8R4U7 1068 aaKnown RBP13.49□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Ncoa5Q91W39 579 aaKnown RBP13.49□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Ddx27Q921N6 760 aaKnown RBP13.49□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Rrp1P56183 494 aaKnown RBP13.48□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Trim56Q80VI1 734 aaKnown RBP13.48□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Frat2Q8K025 231 aa13.48□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Ddx54Q8K4L0 874 aaKnown RBP13.48□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Terf2ipQ91VL8 393 aa13.48□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Clic4Q9QYB1 253 aa13.48□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Mon2Q80TL7 1715 aa13.48□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Cfap99A0A140LIX9 648 aa13.48□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Myd88P22366 296 aa13.48□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Samsn1P57725 372 aa13.48□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Gnat3Q3V3I2 354 aa13.48□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Kcna6Q61923 529 aa13.48□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Smarcc2Q6PDG5 1213 aa13.48□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Ehd2Q8BH64 543 aa13.48□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Mrps25Q9D125 171 aaKnown RBP13.48□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Rgs9O54828 675 aa13.48□□□□□ -0.25
Col9a1-202ENSMUST00000088349 U2af1l4Q8BGJ9 220 aa13.48□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Gigyf1Q99MR1 1044 aaKnown RBP13.48□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Xpo4Q9ESJ0 1151 aa13.48□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Ubn2Q80WC1 1314 aa13.47□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Cyp2d34L7N463 504 aa13.47□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Card10P58660 1021 aa13.47□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Hspd1P63038 573 aaKnown RBP13.47□□□□□ -0.25
Col9a1-202ENSMUST00000088349 AidaQ8C4Q6 305 aa13.47□□□□□ -0.25
Col9a1-202ENSMUST00000088349 SdsQ8VBT2 327 aa13.47□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Sult6b1P0CC03 303 aa13.47□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Eif3bQ8JZQ9 803 aaKnown RBP13.47□□□□□ -0.25
Col9a1-202ENSMUST00000088349 BrapQ99MP8 591 aa13.47□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Cap2Q9CYT6 476 aa13.47□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Pramel3A2AHA7 463 aa13.46□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Gm7903A2AWL1 463 aa13.46□□□□□ -0.25
Col9a1-202ENSMUST00000088349 AV320801A2AWL3 467 aa13.46□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Gm15023L7MUB4 467 aa13.46□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Irx2P81066 474 aa13.46□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Tmem109Q3UBX0 243 aa13.46□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Clstn1Q9EPL2 979 aa13.46□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Col14a1Q80X19 1797 aa13.46□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Dnajc25A2ALW5 357 aa13.46□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Nbr1P97432 988 aa13.46□□□□□ -0.25
Col9a1-202ENSMUST00000088349 LyarQ08288 388 aaKnown RBP13.46□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Ccnl1Q52KE7 532 aaKnown RBP13.46□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Ints5Q8CHT3 1018 aa13.46□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Alg3Q8K2A8 438 aa13.46□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Flad1Q8R123 492 aa13.46□□□□□ -0.25
Col9a1-202ENSMUST00000088349 Rimbp3Q3V0F0 1606 aa13.46□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Fam43aQ8BUP8 424 aa13.45□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Gm29094F6Q785 221 aa13.45□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Sh3bp1P55194 680 aa13.45□□□□□ -0.26
Col9a1-202ENSMUST00000088349 VeztQ3ZK22 780 aa13.45□□□□□ -0.26
Col9a1-202ENSMUST00000088349 MthfsQ9D110 203 aa13.45□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Stard3nlQ9DCI3 235 aa13.45□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Tpm1P58771 284 aa13.45□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Gas2l3Q3UWW6 683 aa13.45□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Smg7Q5RJH6 1138 aaKnown RBP13.45□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Cdca8Q8BHX3 289 aa13.45□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Ltb4r2Q9JJL9 360 aa13.45□□□□□ -0.26
Col9a1-202ENSMUST00000088349 CebpaP53566 359 aa13.44□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Dnaaf4Q8R368 420 aa13.44□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Ddx41Q91VN6 622 aaKnown RBP13.44□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Odf2lQ9D478 642 aa13.44□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Simc1E9Q6E9 1354 aa13.44□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Vgll3P85442 326 aa13.44□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Ankle2Q6P1H6 964 aa13.44□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Sec62Q8BU14 398 aaKnown RBP13.44□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Mical1Q8VDP3 1048 aa13.44□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Vmn2r23E9PXI5 849 aa13.43□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Exosc10P56960 887 aaKnown RBP13.43□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Slfnl1Q8BHW9 410 aa13.43□□□□□ -0.26
Col9a1-202ENSMUST00000088349 ApobrQ8VBT6 942 aa13.43□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Stxbp4Q9WV89 557 aa13.43□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Zkscan5Q9Z1D8 819 aa13.43□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Prl3d3A0A0M6L0J6 224 aa13.43□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Surf1P09925 306 aa13.43□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Ddx58Q6Q899 926 aa13.43□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Dnm3Q8BZ98 863 aa13.43□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Lrrc2Q8VDB8 371 aa13.43□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Trim59Q922Y2 403 aa13.43□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Cwc25Q9DBF7 416 aa13.43□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Scn4aQ9ER60 1841 aa13.43□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Sptlc2P97363 560 aaKnown RBP13.43□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Mei4Q8BRM6 389 aa13.43□□□□□ -0.26
Col9a1-202ENSMUST00000088349 CerkQ8K4Q7 531 aa13.43□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Krt25Q8VCW2 446 aa13.43□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Usp42B2RQC2 1324 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms