RNA–Protein interactions for RNA: ENSMUST00000087253.10

Tro-201, Transcript of Tro protein, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Tro, Length 3,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tro-201ENSMUST00000087253 Dusp10Q9ESS0 483 aa12.24□□□□□ -0.45
Tro-201ENSMUST00000087253 Zkscan4Q5SZT6 480 aa12.24□□□□□ -0.45
Tro-201ENSMUST00000087253 4930572O03RikQ8C5Y0 211 aa12.24□□□□□ -0.45
Tro-201ENSMUST00000087253 Mtmr3Q8K296 1196 aa12.24□□□□□ -0.45
Tro-201ENSMUST00000087253 Golph3lQ8R088 285 aaKnown RBP12.24□□□□□ -0.45
Tro-201ENSMUST00000087253 Mrpl44Q9CY73 333 aaKnown RBP12.24□□□□□ -0.45
Tro-201ENSMUST00000087253 Rrs1Q9CYH6 365 aaKnown RBP12.24□□□□□ -0.45
Tro-201ENSMUST00000087253 Crb1Q8VHS2 1405 aa12.24□□□□□ -0.45
Tro-201ENSMUST00000087253 Clec11aO88200 328 aa12.23□□□□□ -0.45
Tro-201ENSMUST00000087253 Ccdc82Q6PG04 518 aa12.23□□□□□ -0.45
Tro-201ENSMUST00000087253 Chmp7Q8R1T1 451 aa12.23□□□□□ -0.45
Tro-201ENSMUST00000087253 Soga3Q6NZL0 945 aa12.22□□□□□ -0.45
Tro-201ENSMUST00000087253 Tubb6Q922F4 447 aa12.22□□□□□ -0.45
Tro-201ENSMUST00000087253 Cacna1sQ02789 1880 aa12.22□□□□□ -0.45
Tro-201ENSMUST00000087253 Timm10P62073 90 aa12.22□□□□□ -0.45
Tro-201ENSMUST00000087253 Hand2Q61039 217 aa12.22□□□□□ -0.45
Tro-201ENSMUST00000087253 Ints5Q8CHT3 1018 aa12.22□□□□□ -0.45
Tro-201ENSMUST00000087253 PigbQ9JJQ0 542 aa12.22□□□□□ -0.45
Tro-201ENSMUST00000087253 Elf2Q9JHC9 593 aa12.22□□□□□ -0.45
Tro-201ENSMUST00000087253 Txnrd1Q9JMH6 613 aa12.21□□□□□ -0.45
Tro-201ENSMUST00000087253 Fam50bQ9WTJ8 334 aa12.21□□□□□ -0.45
Tro-201ENSMUST00000087253 Lrp5Q91VN0 1614 aa12.21□□□□□ -0.45
Tro-201ENSMUST00000087253 Sh3bp1P55194 680 aa12.21□□□□□ -0.46
Tro-201ENSMUST00000087253 Spty2d1Q68FG3 682 aa12.21□□□□□ -0.46
Tro-201ENSMUST00000087253 Dhx40Q6PE54 779 aaKnown RBP12.21□□□□□ -0.46
Tro-201ENSMUST00000087253 Znf526Q8BI66 675 aa12.21□□□□□ -0.46
Tro-201ENSMUST00000087253 Q8BZJ8 459 aa12.21□□□□□ -0.46
Tro-201ENSMUST00000087253 Frat2Q8K025 231 aa12.21□□□□□ -0.46
Tro-201ENSMUST00000087253 Ddx27Q921N6 760 aaKnown RBP12.21□□□□□ -0.46
Tro-201ENSMUST00000087253 Znf568E9PYI1 671 aa12.2□□□□□ -0.46
Tro-201ENSMUST00000087253 Samsn1P57725 372 aa12.2□□□□□ -0.46
Tro-201ENSMUST00000087253 Irx2P81066 474 aa12.2□□□□□ -0.46
Tro-201ENSMUST00000087253 Ccdc129Q14B48 1034 aa12.2□□□□□ -0.46
Tro-201ENSMUST00000087253 Gm21985Q6P6P5 1106 aa12.2□□□□□ -0.46
Tro-201ENSMUST00000087253 Rbm17Q8JZX4 405 aaKnown RBP12.2□□□□□ -0.46
Tro-201ENSMUST00000087253 Rufy2Q8R4C2 606 aa12.2□□□□□ -0.46
Tro-201ENSMUST00000087253 Hps3Q91VB4 1002 aa12.2□□□□□ -0.46
Tro-201ENSMUST00000087253 Ric1Q69ZJ7 1422 aa12.2□□□□□ -0.46
Tro-201ENSMUST00000087253 XpcP51612 930 aa12.2□□□□□ -0.46
Tro-201ENSMUST00000087253 Vgll3P85442 326 aa12.2□□□□□ -0.46
Tro-201ENSMUST00000087253 Mb21d2Q8C525 428 aa12.2□□□□□ -0.46
Tro-201ENSMUST00000087253 Stk38Q91VJ4 465 aa12.2□□□□□ -0.46
Tro-201ENSMUST00000087253 Snw1Q9CSN1 536 aaKnown RBP12.2□□□□□ -0.46
Tro-201ENSMUST00000087253 TefQ9JLC6 301 aa12.2□□□□□ -0.46
Tro-201ENSMUST00000087253 Ankrd31A0A140LI88 1765 aa12.2□□□□□ -0.46
Tro-201ENSMUST00000087253 Ubn2Q80WC1 1314 aa12.2□□□□□ -0.46
Tro-201ENSMUST00000087253 Kcnh4A2A5F7 1018 aa12.2□□□□□ -0.46
Tro-201ENSMUST00000087253 Rrp1P56183 494 aaKnown RBP12.2□□□□□ -0.46
Tro-201ENSMUST00000087253 Nlrp9bQ66X22 1003 aa12.2□□□□□ -0.46
Tro-201ENSMUST00000087253 Luzp1Q8R4U7 1068 aaKnown RBP12.2□□□□□ -0.46
Tro-201ENSMUST00000087253 RubcnlQ3TD16 648 aa12.19□□□□□ -0.46
Tro-201ENSMUST00000087253 Ptcd1Q8C2E4 695 aaKnown RBP12.19□□□□□ -0.46
Tro-201ENSMUST00000087253 Trim52Q8CDV4 233 aa12.19□□□□□ -0.46
Tro-201ENSMUST00000087253 Eif3bQ8JZQ9 803 aaKnown RBP12.19□□□□□ -0.46
Tro-201ENSMUST00000087253 Erc1Q99MI1 1120 aa12.19□□□□□ -0.46
Tro-201ENSMUST00000087253 Fam114a1Q9D281 569 aa12.19□□□□□ -0.46
Tro-201ENSMUST00000087253 Col4a3bpQ9EQG9 624 aa12.19□□□□□ -0.46
Tro-201ENSMUST00000087253 TrdnE9Q9K5 693 aa12.19□□□□□ -0.46
Tro-201ENSMUST00000087253 Tpm1P58771 284 aa12.19□□□□□ -0.46
Tro-201ENSMUST00000087253 Tmem67Q8BR76 992 aa12.19□□□□□ -0.46
Tro-201ENSMUST00000087253 Xpo4Q9ESJ0 1151 aa12.19□□□□□ -0.46
Tro-201ENSMUST00000087253 Cfap99A0A140LIX9 648 aa12.18□□□□□ -0.46
Tro-201ENSMUST00000087253 Fkbp5Q64378 456 aa12.18□□□□□ -0.46
Tro-201ENSMUST00000087253 Zranb3Q6NZP1 1069 aa12.18□□□□□ -0.46
Tro-201ENSMUST00000087253 Tmem87bQ8BKU8 555 aa12.18□□□□□ -0.46
Tro-201ENSMUST00000087253 Ddx41Q91VN6 622 aaKnown RBP12.18□□□□□ -0.46
Tro-201ENSMUST00000087253 AtrnQ9WU60 1428 aa12.18□□□□□ -0.46
Tro-201ENSMUST00000087253 Usp44Q8C2S0 711 aa12.18□□□□□ -0.46
Tro-201ENSMUST00000087253 Ybx3Q9JKB3 361 aaKnown RBP12.18□□□□□ -0.46
Tro-201ENSMUST00000087253 Clic4Q9QYB1 253 aa12.18□□□□□ -0.46
Tro-201ENSMUST00000087253 Zkscan5Q9Z1D8 819 aa12.18□□□□□ -0.46
Tro-201ENSMUST00000087253 Lama4P97927 1816 aa12.18□□□□□ -0.46
Tro-201ENSMUST00000087253 Ehd2Q8BH64 543 aa12.18□□□□□ -0.46
Tro-201ENSMUST00000087253 Terf2ipQ91VL8 393 aa12.18□□□□□ -0.46
Tro-201ENSMUST00000087253 Odf2lQ9D478 642 aa12.18□□□□□ -0.46
Tro-201ENSMUST00000087253 Kcnj4P52189 445 aa12.17□□□□□ -0.46
Tro-201ENSMUST00000087253 Smarcc2Q6PDG5 1213 aa12.17□□□□□ -0.46
Tro-201ENSMUST00000087253 U2af1l4Q8BGJ9 220 aa12.17□□□□□ -0.46
Tro-201ENSMUST00000087253 Dnaaf4Q8R368 420 aa12.17□□□□□ -0.46
Tro-201ENSMUST00000087253 Mrps25Q9D125 171 aaKnown RBP12.17□□□□□ -0.46
Tro-201ENSMUST00000087253 InsrrQ9WTL4 1300 aa12.17□□□□□ -0.46
Tro-201ENSMUST00000087253 Rgs9O54828 675 aa12.17□□□□□ -0.46
Tro-201ENSMUST00000087253 Cyp2d10P24456 504 aa12.17□□□□□ -0.46
Tro-201ENSMUST00000087253 MypnQ5DTJ9 1315 aa12.17□□□□□ -0.46
Tro-201ENSMUST00000087253 Dnajc25A2ALW5 357 aa12.16□□□□□ -0.46
Tro-201ENSMUST00000087253 Zbtb21E9Q444 1094 aa12.16□□□□□ -0.46
Tro-201ENSMUST00000087253 Serpinb6bO08804 377 aa12.16□□□□□ -0.46
Tro-201ENSMUST00000087253 C4bP01029 1738 aa12.16□□□□□ -0.46
Tro-201ENSMUST00000087253 Tmem109Q3UBX0 243 aa12.16□□□□□ -0.46
Tro-201ENSMUST00000087253 Kcnq3Q8K3F6 873 aa12.16□□□□□ -0.46
Tro-201ENSMUST00000087253 SdsQ8VBT2 327 aa12.16□□□□□ -0.46
Tro-201ENSMUST00000087253 BrapQ99MP8 591 aa12.16□□□□□ -0.46
Tro-201ENSMUST00000087253 Gigyf1Q99MR1 1044 aaKnown RBP12.16□□□□□ -0.46
Tro-201ENSMUST00000087253 Plch1Q4KWH5 1682 aa12.16□□□□□ -0.46
Tro-201ENSMUST00000087253 Pramel3A2AHA7 463 aa12.16□□□□□ -0.46
Tro-201ENSMUST00000087253 Gm7903A2AWL1 463 aa12.16□□□□□ -0.46
Tro-201ENSMUST00000087253 AV320801A2AWL3 467 aa12.16□□□□□ -0.46
Tro-201ENSMUST00000087253 Gm15023L7MUB4 467 aa12.16□□□□□ -0.46
Tro-201ENSMUST00000087253 Hspd1P63038 573 aaKnown RBP12.16□□□□□ -0.46
Tro-201ENSMUST00000087253 Nbr1P97432 988 aa12.16□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 88.4 ms