RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 Atp1b3P97370 278 aa8.99□□□□□ -0.97
Trim40-201ENSMUST00000087158 Plekhf1Q3TB82 279 aa8.99□□□□□ -0.97
Trim40-201ENSMUST00000087158 Polr3dQ91WD1 398 aa8.99□□□□□ -0.97
Trim40-201ENSMUST00000087158 Cdca7lQ922M5 438 aa8.99□□□□□ -0.97
Trim40-201ENSMUST00000087158 Chmp4cQ9D7F7 232 aa8.99□□□□□ -0.97
Trim40-201ENSMUST00000087158 TprnA2AI08 749 aaKnown RBP8.98□□□□□ -0.97
Trim40-201ENSMUST00000087158 Stox1B2RQL2 990 aa8.98□□□□□ -0.97
Trim40-201ENSMUST00000087158 Speer4dL7N216 212 aa8.98□□□□□ -0.97
Trim40-201ENSMUST00000087158 ImpactO55091 318 aa8.98□□□□□ -0.97
Trim40-201ENSMUST00000087158 Syt1P46096 421 aa8.98□□□□□ -0.97
Trim40-201ENSMUST00000087158 Zdhhc9P59268 364 aa8.98□□□□□ -0.97
Trim40-201ENSMUST00000087158 Nlrp9aQ66X03 949 aa8.98□□□□□ -0.97
Trim40-201ENSMUST00000087158 Ltv1Q6NSQ7 470 aaKnown RBP8.98□□□□□ -0.97
Trim40-201ENSMUST00000087158 Kank4Q6P9J5 1016 aa8.98□□□□□ -0.97
Trim40-201ENSMUST00000087158 Tex2Q6ZPJ0 1128 aaKnown RBP8.98□□□□□ -0.97
Trim40-201ENSMUST00000087158 HmcesQ8R1M0 353 aaKnown RBP8.98□□□□□ -0.97
Trim40-201ENSMUST00000087158 Myh7Q91Z83 1935 aa8.98□□□□□ -0.97
Trim40-201ENSMUST00000087158 Gm45015A0A140LII9 184 aa8.98□□□□□ -0.97
Trim40-201ENSMUST00000087158 Gm18336A0A140LIU8 765 aa8.98□□□□□ -0.97
Trim40-201ENSMUST00000087158 Pde4bB1AWC9 736 aa8.98□□□□□ -0.97
Trim40-201ENSMUST00000087158 CltaO08585 235 aa8.98□□□□□ -0.97
Trim40-201ENSMUST00000087158 Prl3d1P18121 224 aa8.98□□□□□ -0.97
Trim40-201ENSMUST00000087158 Cyp2d10P24456 504 aa8.98□□□□□ -0.97
Trim40-201ENSMUST00000087158 Zc3h15Q3TIV5 426 aaKnown RBP8.98□□□□□ -0.97
Trim40-201ENSMUST00000087158 Kiaa0753Q6A000 959 aa8.98□□□□□ -0.97
Trim40-201ENSMUST00000087158 Pdcl2Q78Y63 240 aa8.98□□□□□ -0.97
Trim40-201ENSMUST00000087158 Sp8Q8BMJ8 486 aa8.98□□□□□ -0.97
Trim40-201ENSMUST00000087158 Usp44Q8C2S0 711 aa8.98□□□□□ -0.97
Trim40-201ENSMUST00000087158 Pof1bQ8K4L4 587 aa8.98□□□□□ -0.97
Trim40-201ENSMUST00000087158 Lrrfip2Q91WK0 415 aa8.98□□□□□ -0.97
Trim40-201ENSMUST00000087158 Ube3bQ9ES34 1070 aa8.98□□□□□ -0.97
Trim40-201ENSMUST00000087158 Gdpd2Q9ESM6 539 aa8.98□□□□□ -0.97
Trim40-201ENSMUST00000087158 Pus3Q9JI38 481 aa8.98□□□□□ -0.97
Trim40-201ENSMUST00000087158 Setdb1O88974 1307 aa8.97□□□□□ -0.97
Trim40-201ENSMUST00000087158 Gm4340L7N2C4 268 aa8.97□□□□□ -0.97
Trim40-201ENSMUST00000087158 Hap1O35668 628 aa8.97□□□□□ -0.97
Trim40-201ENSMUST00000087158 Il17raQ60943 864 aa8.97□□□□□ -0.97
Trim40-201ENSMUST00000087158 Abtb2Q7TQI7 1024 aa8.97□□□□□ -0.97
Trim40-201ENSMUST00000087158 Sptlc3Q8BG54 563 aa8.97□□□□□ -0.97
Trim40-201ENSMUST00000087158 Rbm17Q8JZX4 405 aaKnown RBP8.97□□□□□ -0.97
Trim40-201ENSMUST00000087158 Tubb6Q922F4 447 aa8.97□□□□□ -0.97
Trim40-201ENSMUST00000087158 Fam84aQ9D650 292 aa8.97□□□□□ -0.97
Trim40-201ENSMUST00000087158 Foxo3Q9WVH4 672 aa8.97□□□□□ -0.97
Trim40-201ENSMUST00000087158 Stk25Q9Z2W1 426 aa8.97□□□□□ -0.97
Trim40-201ENSMUST00000087158 Duox1A2AQ92 1551 aa8.97□□□□□ -0.97
Trim40-201ENSMUST00000087158 Znfx1Q8R151 1909 aaKnown RBP8.97□□□□□ -0.97
Trim40-201ENSMUST00000087158 Rasa1E9PYG6 1038 aa8.96□□□□□ -0.97
Trim40-201ENSMUST00000087158 Ube4aE9Q735 1028 aa8.96□□□□□ -0.97
Trim40-201ENSMUST00000087158 Hspd1P63038 573 aaKnown RBP8.96□□□□□ -0.97
Trim40-201ENSMUST00000087158 Zfp91Q62511 572 aa8.96□□□□□ -0.97
Trim40-201ENSMUST00000087158 DekQ7TNV0 380 aaKnown RBP8.96□□□□□ -0.97
Trim40-201ENSMUST00000087158 Map10Q8BJS7 891 aa8.96□□□□□ -0.97
Trim40-201ENSMUST00000087158 Rps6kb1Q8BSK8 525 aa8.96□□□□□ -0.97
Trim40-201ENSMUST00000087158 AidaQ8C4Q6 305 aa8.96□□□□□ -0.97
Trim40-201ENSMUST00000087158 Tmem143Q8VD26 458 aa8.96□□□□□ -0.97
Trim40-201ENSMUST00000087158 Sh3bp5Q9Z131 463 aa8.96□□□□□ -0.97
Trim40-201ENSMUST00000087158 Col3a1P08121 1464 aa8.96□□□□□ -0.97
Trim40-201ENSMUST00000087158 Lmbrd2Q8C561 694 aa8.96□□□□□ -0.98
Trim40-201ENSMUST00000087158 Sf3b3Q921M3 1217 aaKnown RBP8.96□□□□□ -0.98
Trim40-201ENSMUST00000087158 RtcbQ99LF4 505 aaKnown RBP8.96□□□□□ -0.98
Trim40-201ENSMUST00000087158 IncenpQ9WU62 880 aa8.96□□□□□ -0.98
Trim40-201ENSMUST00000087158 1700029H14RikE9PY36 240 aa8.95□□□□□ -0.98
Trim40-201ENSMUST00000087158 F2rP30558 430 aa8.95□□□□□ -0.98
Trim40-201ENSMUST00000087158 Pkp1P97350 728 aaKnown RBP8.95□□□□□ -0.98
Trim40-201ENSMUST00000087158 VeztQ3ZK22 780 aa8.95□□□□□ -0.98
Trim40-201ENSMUST00000087158 Nme8Q715T0 586 aa8.95□□□□□ -0.98
Trim40-201ENSMUST00000087158 Ccdc96Q9CR92 584 aa8.95□□□□□ -0.98
Trim40-201ENSMUST00000087158 Appbp2Q9DAX9 585 aa8.95□□□□□ -0.98
Trim40-201ENSMUST00000087158 Scn11aQ9R053 1765 aa8.95□□□□□ -0.98
Trim40-201ENSMUST00000087158 Irgm2A0A140LIF8 407 aa8.95□□□□□ -0.98
Trim40-201ENSMUST00000087158 Ccdc6D3YZP9 469 aa8.95□□□□□ -0.98
Trim40-201ENSMUST00000087158 Prl7a2O54831 253 aa8.95□□□□□ -0.98
Trim40-201ENSMUST00000087158 GabrdP22933 449 aa8.95□□□□□ -0.98
Trim40-201ENSMUST00000087158 GalcP54818 684 aa8.95□□□□□ -0.98
Trim40-201ENSMUST00000087158 Kiaa0319Q5SZV5 1081 aa8.95□□□□□ -0.98
Trim40-201ENSMUST00000087158 Trim56Q80VI1 734 aaKnown RBP8.95□□□□□ -0.98
Trim40-201ENSMUST00000087158 Ptcd1Q8C2E4 695 aaKnown RBP8.95□□□□□ -0.98
Trim40-201ENSMUST00000087158 Fez1Q8K0X8 392 aa8.95□□□□□ -0.98
Trim40-201ENSMUST00000087158 Smc3Q9CW03 1217 aaKnown RBP8.95□□□□□ -0.98
Trim40-201ENSMUST00000087158 Hmgb2P30681 210 aaKnown RBP8.94□□□□□ -0.98
Trim40-201ENSMUST00000087158 Slc7a3P70423 618 aa8.94□□□□□ -0.98
Trim40-201ENSMUST00000087158 EappQ5BU09 281 aa8.94□□□□□ -0.98
Trim40-201ENSMUST00000087158 Kiaa1211Q5PR69 1207 aa8.94□□□□□ -0.98
Trim40-201ENSMUST00000087158 Slc39a11Q8BWY7 342 aa8.94□□□□□ -0.98
Trim40-201ENSMUST00000087158 Adam1bQ8R534 806 aa8.94□□□□□ -0.98
Trim40-201ENSMUST00000087158 Mrpl50Q8VDT9 159 aaKnown RBP8.94□□□□□ -0.98
Trim40-201ENSMUST00000087158 Myh3P13541 1940 aa8.94□□□□□ -0.98
Trim40-201ENSMUST00000087158 Ubn2Q80WC1 1314 aa8.94□□□□□ -0.98
Trim40-201ENSMUST00000087158 Ly75Q60767 1723 aa8.94□□□□□ -0.98
Trim40-201ENSMUST00000087158 Zfyve9A2A8R0 1397 aa8.94□□□□□ -0.98
Trim40-201ENSMUST00000087158 Znf496Q5SXI5 585 aa8.93□□□□□ -0.98
Trim40-201ENSMUST00000087158 Srp68Q8BMA6 625 aaKnown RBP8.93□□□□□ -0.98
Trim40-201ENSMUST00000087158 Ccdc158Q8CDI6 1109 aa8.93□□□□□ -0.98
Trim40-201ENSMUST00000087158 Rassf8Q8CJ96 419 aa8.93□□□□□ -0.98
Trim40-201ENSMUST00000087158 Ube2q2Q8K2Z8 378 aa8.93□□□□□ -0.98
Trim40-201ENSMUST00000087158 Amhr2Q8K592 568 aa8.93□□□□□ -0.98
Trim40-201ENSMUST00000087158 Tceanc2Q8R2M0 207 aa8.93□□□□□ -0.98
Trim40-201ENSMUST00000087158 Nup98Q6PFD9 1816 aaKnown RBP8.93□□□□□ -0.98
Trim40-201ENSMUST00000087158 Usp42B2RQC2 1324 aaKnown RBP8.93□□□□□ -0.98
Trim40-201ENSMUST00000087158 Eef2kO08796 724 aa8.93□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms