RNA–Protein interactions for RNA: ENSMUST00000067005.10

Syne3-201, Transcript of Nesprin-3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Syne3, Length 5,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3-201ENSMUST00000067005 Vps54Q5SPW0 977 aa16.8■□□□□ 0.28
Syne3-201ENSMUST00000067005 Ncoa4Q5U4H9 625 aa16.8■□□□□ 0.28
Syne3-201ENSMUST00000067005 P4ha1Q60715 534 aa16.8■□□□□ 0.28
Syne3-201ENSMUST00000067005 Sass6Q80UK7 654 aa16.8■□□□□ 0.28
Syne3-201ENSMUST00000067005 Larp6Q8BN59 492 aa16.8■□□□□ 0.28
Syne3-201ENSMUST00000067005 Slc39a6Q8C145 765 aa16.8■□□□□ 0.28
Syne3-201ENSMUST00000067005 Arhgef6Q8K4I3 771 aa16.8■□□□□ 0.28
Syne3-201ENSMUST00000067005 Pdzd9Q9D9M4 266 aa16.8■□□□□ 0.28
Syne3-201ENSMUST00000067005 Smc1bQ920F6 1248 aa16.8■□□□□ 0.28
Syne3-201ENSMUST00000067005 Cyp27a1Q9DBG1 533 aa16.8■□□□□ 0.28
Syne3-201ENSMUST00000067005 Syt10Q9R0N4 523 aa16.8■□□□□ 0.28
Syne3-201ENSMUST00000067005 Ccdc73Q8CDM4 1066 aa16.79■□□□□ 0.28
Syne3-201ENSMUST00000067005 Syce1Q9D495 329 aa16.79■□□□□ 0.28
Syne3-201ENSMUST00000067005 Naa16Q9DBB4 864 aa16.79■□□□□ 0.28
Syne3-201ENSMUST00000067005 Hook2Q7TMK6 716 aa16.79■□□□□ 0.28
Syne3-201ENSMUST00000067005 Ptcd1Q8C2E4 695 aaKnown RBP16.79■□□□□ 0.28
Syne3-201ENSMUST00000067005 Usp19Q3UJD6 1360 aa16.79■□□□□ 0.28
Syne3-201ENSMUST00000067005 Atg4a-psA0A0G2JFS9 396 aa16.79■□□□□ 0.28
Syne3-201ENSMUST00000067005 Atg4aQ8C9S8 396 aa16.79■□□□□ 0.28
Syne3-201ENSMUST00000067005 Usp54Q8BL06 1588 aaKnown RBP16.79■□□□□ 0.28
Syne3-201ENSMUST00000067005 Tacc2Q9JJG0 1149 aa16.79■□□□□ 0.28
Syne3-201ENSMUST00000067005 Aox1O54754 1333 aa16.79■□□□□ 0.28
Syne3-201ENSMUST00000067005 Kifc2O08672 792 aa16.78■□□□□ 0.28
Syne3-201ENSMUST00000067005 Epb41l2O70318 988 aaKnown RBP16.78■□□□□ 0.28
Syne3-201ENSMUST00000067005 Nap1l4Q78ZA7 375 aaKnown RBP16.78■□□□□ 0.28
Syne3-201ENSMUST00000067005 Ccdc12Q8R344 166 aaKnown RBP16.78■□□□□ 0.28
Syne3-201ENSMUST00000067005 Terf2ipQ91VL8 393 aa16.78■□□□□ 0.28
Syne3-201ENSMUST00000067005 Sun3Q5SS91 320 aa16.78■□□□□ 0.28
Syne3-201ENSMUST00000067005 Exoc1Q8R3S6 894 aa16.78■□□□□ 0.28
Syne3-201ENSMUST00000067005 Clip2Q9Z0H8 1047 aa16.78■□□□□ 0.28
Syne3-201ENSMUST00000067005 Tubb4bP68372 445 aaKnown RBP16.78■□□□□ 0.28
Syne3-201ENSMUST00000067005 Ppp2r5bQ6PD28 497 aa16.77■□□□□ 0.28
Syne3-201ENSMUST00000067005 Myl6bQ8CI43 207 aa16.77■□□□□ 0.28
Syne3-201ENSMUST00000067005 Txnrd1Q9JMH6 613 aa16.77■□□□□ 0.28
Syne3-201ENSMUST00000067005 Pram1Q6BCL1 675 aa16.77■□□□□ 0.28
Syne3-201ENSMUST00000067005 Chd1lQ9CXF7 900 aa16.77■□□□□ 0.28
Syne3-201ENSMUST00000067005 Acot9Q9R0X4 439 aaKnown RBP16.77■□□□□ 0.28
Syne3-201ENSMUST00000067005 F2rP30558 430 aa16.77■□□□□ 0.28
Syne3-201ENSMUST00000067005 CalcaP70160 136 aa16.77■□□□□ 0.28
Syne3-201ENSMUST00000067005 Gdpd2Q9ESM6 539 aa16.77■□□□□ 0.28
Syne3-201ENSMUST00000067005 Erbb3Q61526 1339 aa16.77■□□□□ 0.27
Syne3-201ENSMUST00000067005 Casp1P29452 402 aa16.77■□□□□ 0.27
Syne3-201ENSMUST00000067005 Timm10P62073 90 aa16.77■□□□□ 0.27
Syne3-201ENSMUST00000067005 Ccdc42Q5SV66 316 aa16.77■□□□□ 0.27
Syne3-201ENSMUST00000067005 Gas8Q60779 478 aa16.77■□□□□ 0.27
Syne3-201ENSMUST00000067005 Asic1Q6NXK8 526 aa16.77■□□□□ 0.27
Syne3-201ENSMUST00000067005 Kank4Q6P9J5 1016 aa16.77■□□□□ 0.27
Syne3-201ENSMUST00000067005 Tmx3Q8BXZ1 456 aa16.77■□□□□ 0.27
Syne3-201ENSMUST00000067005 Ndufa8Q9DCJ5 172 aa16.77■□□□□ 0.27
Syne3-201ENSMUST00000067005 Mlh1Q9JK91 760 aa16.77■□□□□ 0.27
Syne3-201ENSMUST00000067005 Myom2Q14BI5 1463 aa16.77■□□□□ 0.27
Syne3-201ENSMUST00000067005 NmiO35309 314 aa16.76■□□□□ 0.27
Syne3-201ENSMUST00000067005 Kcnj4P52189 445 aa16.76■□□□□ 0.27
Syne3-201ENSMUST00000067005 Zkscan4Q5SZT6 480 aa16.76■□□□□ 0.27
Syne3-201ENSMUST00000067005 AmfrQ9R049 643 aa16.76■□□□□ 0.27
Syne3-201ENSMUST00000067005 Fam186bD3Z420 943 aa16.76■□□□□ 0.27
Syne3-201ENSMUST00000067005 Krt15Q61414 452 aa16.76■□□□□ 0.27
Syne3-201ENSMUST00000067005 Setdb1O88974 1307 aa16.76■□□□□ 0.27
Syne3-201ENSMUST00000067005 Erbb4Q61527 1308 aa16.76■□□□□ 0.27
Syne3-201ENSMUST00000067005 Trim55G3X8Y1 545 aa16.76■□□□□ 0.27
Syne3-201ENSMUST00000067005 SsbP32067 415 aaKnown RBP16.76■□□□□ 0.27
Syne3-201ENSMUST00000067005 Ncapd2Q8K2Z4 1392 aa16.76■□□□□ 0.27
Syne3-201ENSMUST00000067005 Lrriq1Q0P5X1 1673 aa16.76■□□□□ 0.27
Syne3-201ENSMUST00000067005 Tpx2A2APB8 745 aaKnown RBP16.76■□□□□ 0.27
Syne3-201ENSMUST00000067005 Slc27a3O88561 667 aa16.76■□□□□ 0.27
Syne3-201ENSMUST00000067005 Rbm17Q8JZX4 405 aaKnown RBP16.76■□□□□ 0.27
Syne3-201ENSMUST00000067005 Kif14L0N7N1 1674 aaKnown RBP16.76■□□□□ 0.27
Syne3-201ENSMUST00000067005 Ccdc121E9Q6D3 323 aa16.75■□□□□ 0.27
Syne3-201ENSMUST00000067005 Chl1P70232 1209 aa16.75■□□□□ 0.27
Syne3-201ENSMUST00000067005 CalrP14211 416 aaKnown RBP16.75■□□□□ 0.27
Syne3-201ENSMUST00000067005 NppbP40753 121 aa16.75■□□□□ 0.27
Syne3-201ENSMUST00000067005 Vps18Q8R307 973 aa16.75■□□□□ 0.27
Syne3-201ENSMUST00000067005 Clasp1Q80TV8 1535 aaKnown RBP16.75■□□□□ 0.27
Syne3-201ENSMUST00000067005 Gm29094F6Q785 221 aa16.75■□□□□ 0.27
Syne3-201ENSMUST00000067005 Nlrp1aQ2LKU9 1182 aa16.75■□□□□ 0.27
Syne3-201ENSMUST00000067005 Smarcc2Q6PDG5 1213 aa16.75■□□□□ 0.27
Syne3-201ENSMUST00000067005 Rab3gap1Q80UJ7 981 aa16.75■□□□□ 0.27
Syne3-201ENSMUST00000067005 Tcp11l1Q8BTG3 509 aa16.75■□□□□ 0.27
Syne3-201ENSMUST00000067005 Gm28047Q3US59 414 aa16.74■□□□□ 0.27
Syne3-201ENSMUST00000067005 ParnQ8VDG3 624 aa16.74■□□□□ 0.27
Syne3-201ENSMUST00000067005 Pcdhb5Q91XZ5 792 aa16.74■□□□□ 0.27
Syne3-201ENSMUST00000067005 Zfp42P22227 288 aa16.74■□□□□ 0.27
Syne3-201ENSMUST00000067005 Gadd45bP22339 160 aa16.74■□□□□ 0.27
Syne3-201ENSMUST00000067005 Wdr93Q402B2 695 aa16.74■□□□□ 0.27
Syne3-201ENSMUST00000067005 Tmtc2Q56A06 836 aa16.74■□□□□ 0.27
Syne3-201ENSMUST00000067005 Lman1Q9D0F3 517 aa16.74■□□□□ 0.27
Syne3-201ENSMUST00000067005 Lamc1P02468 1607 aaKnown RBP16.74■□□□□ 0.27
Syne3-201ENSMUST00000067005 Ttc41Q692V3 1318 aa16.74■□□□□ 0.27
Syne3-201ENSMUST00000067005 Arglu1Q3UL36 271 aaKnown RBP16.74■□□□□ 0.27
Syne3-201ENSMUST00000067005 Matr3Q8K310 846 aaKnown RBP16.74■□□□□ 0.27
Syne3-201ENSMUST00000067005 AU022751B1B0V2 589 aa16.74■□□□□ 0.27
Syne3-201ENSMUST00000067005 Gm10378F6XQQ1 160 aa16.74■□□□□ 0.27
Syne3-201ENSMUST00000067005 CebpzP53569 1052 aaKnown RBP16.74■□□□□ 0.27
Syne3-201ENSMUST00000067005 Gm45140A0A0N4SUM8 220 aa16.73■□□□□ 0.27
Syne3-201ENSMUST00000067005 Fam170aQ66LM6 333 aa16.73■□□□□ 0.27
Syne3-201ENSMUST00000067005 Efhd1Q9D4J1 240 aa16.73■□□□□ 0.27
Syne3-201ENSMUST00000067005 Tagap1P0CAX8 505 aa16.73■□□□□ 0.27
Syne3-201ENSMUST00000067005 Fgfr1opQ66JX5 399 aa16.73■□□□□ 0.27
Syne3-201ENSMUST00000067005 Asic4Q7TNS7 539 aa16.73■□□□□ 0.27
Syne3-201ENSMUST00000067005 Uso1Q9Z1Z0 959 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms