RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 Dixdc1Q80Y83 711 aa18.84■□□□□ 0.61
Ttc39b-202ENSMUST00000048274 Slu7Q8BHJ9 585 aa18.84■□□□□ 0.61
Ttc39b-202ENSMUST00000048274 Q8BZJ8 459 aa18.84■□□□□ 0.61
Ttc39b-202ENSMUST00000048274 Srek1Q8BZX4 494 aaKnown RBP18.84■□□□□ 0.61
Ttc39b-202ENSMUST00000048274 Isca1Q9D924 129 aa18.84■□□□□ 0.61
Ttc39b-202ENSMUST00000048274 Rgs12Q8CGE9 1381 aa18.83■□□□□ 0.61
Ttc39b-202ENSMUST00000048274 Dhx8A2A4P0 1244 aaKnown RBP18.83■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Tnnt2P50752 301 aa18.83■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 ErmnQ5EBJ4 281 aa18.83■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Slc39a6Q8C145 765 aa18.83■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Otud6bQ8K2H2 294 aa18.83■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Fam13bQ8K2H3 851 aa18.83■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Eya2O08575 532 aa18.82■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Hap1O35668 628 aa18.82■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 LyarQ08288 388 aaKnown RBP18.82■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Golim4Q8BXA1 655 aa18.82■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Slain2Q8CI08 581 aa18.82■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Pms1Q8K119 917 aa18.82■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Efcab2Q9CQ46 164 aa18.82■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Yeats4Q9CR11 227 aaKnown RBP18.82■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Col18a1P39061 1774 aa18.82■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 AppP12023 770 aa18.81■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Pald1P70261 859 aa18.81■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Zranb3Q6NZP1 1069 aa18.81■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Fbxo2Q80UW2 297 aa18.81■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Cwc25Q9DBF7 416 aa18.81■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Gm21698A0A087WQP8 267 aa18.81■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Gm21671G3UY31 267 aa18.81■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Nfatc2ipO09130 412 aa18.81■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Anks1aP59672 1150 aa18.81■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Ifit1Q64282 463 aa18.81■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Stard3nlQ9DCI3 235 aa18.81■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Pus3Q9JI38 481 aa18.81■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 LratQ9JI60 231 aa18.81■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Cyp2d34L7N463 504 aa18.8■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Ccng2O08918 344 aa18.8■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Jarid2Q62315 1234 aa18.8■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Kiaa0754Q69ZZ9 979 aa18.8■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Cep135Q6P5D4 1140 aa18.8■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Zfp397Q7TNK4 527 aa18.8■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 AidaQ8C4Q6 305 aa18.8■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Smc4Q8CG47 1286 aa18.8■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Rassf8Q8CJ96 419 aa18.8■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Mei1Q9D4I2 1268 aa18.8■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Sipa1l3G3X9J0 1776 aa18.79■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Cfap99A0A140LIX9 648 aa18.79■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Ess2O70279 479 aa18.79■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Surf1P09925 306 aa18.79■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Cers3Q1A3B0 383 aa18.79■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Gpatch11Q3UFS4 262 aa18.79■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Ccdc82Q6PG04 518 aa18.79■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Fsd1Q7TPM6 496 aa18.79■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Sh3bp5Q9Z131 463 aa18.79■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Cdc45Q9Z1X9 566 aa18.79■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Golph3lQ8R088 285 aaKnown RBP18.79■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Nop2Q922K7 793 aaKnown RBP18.79■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Bcl11bQ99PV8 884 aa18.79■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Sik3Q6P4S6 1311 aa18.78■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Gm29094F6Q785 221 aa18.78■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Atp2b1G5E829 1220 aa18.78■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Cct2P80314 535 aaKnown RBP18.78■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Rrs1Q9CYH6 365 aaKnown RBP18.78■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 MthfsQ9D110 203 aa18.78■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Kdm3aQ6PCM1 1323 aa18.78■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Gm43638A0A0J9YU36 694 aa18.77■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Cbx1P83917 185 aaKnown RBP18.77■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Dhx30Q99PU8 1217 aaKnown RBP18.77■□□□□ 0.6
Ttc39b-202ENSMUST00000048274 Card6E9PWH2 1175 aa18.77■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 XpcP51612 930 aa18.77■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Timm10P62073 90 aa18.77■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Taf3Q5HZG4 932 aa18.77■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 TfrcQ62351 763 aaKnown RBP18.77■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Terf2ipQ91VL8 393 aa18.77■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Ankrd1Q9CR42 319 aa18.77■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Tubb4aQ9D6F9 444 aa18.77■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Pes1Q9EQ61 584 aaKnown RBP18.77■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Col3a1P08121 1464 aa18.76■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Col4a1P02463 1669 aa18.76■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Plekhd1B2RPU2 505 aa18.76■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Cyp3a57D3YYZ0 503 aa18.76■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Slc4a1P04919 929 aa18.76■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Gm28047Q3US59 414 aa18.76■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Atp1a3Q6PIC6 1013 aa18.76■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 ImmtQ8CAQ8 757 aaKnown RBP18.76■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Acsbg1Q99PU5 721 aa18.76■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Ccer1Q9CQL2 403 aa18.76■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Ltb4r2Q9JJL9 360 aa18.76■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Myh7Q91Z83 1935 aa18.75■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Ccdc121E9Q6D3 323 aa18.75■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 U2af2P26369 475 aaKnown RBP18.75■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Itga6Q61739 1091 aa18.75■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 TrhQ62361 256 aa18.75■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Panx2Q6IMP4 677 aa18.75■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Ddx41Q91VN6 622 aaKnown RBP18.75■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Fam213aQ9CYH2 218 aa18.75■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Ap5z1Q3U829 807 aa18.74■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Arid5bQ8BM75 1188 aaKnown RBP18.74■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Tmem67Q8BR76 992 aa18.74■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Kiaa1524Q8BWY9 907 aa18.74■□□□□ 0.59
Ttc39b-202ENSMUST00000048274 Lmbrd2Q8C561 694 aa18.74■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 182 ms