RNA–Protein interactions for RNA: ENSMUST00000033012.8

Copb1-201, Transcript of Coatomer subunit beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Copb1, Length 3,346 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1-201ENSMUST00000033012 Atp1a2Q6PIE5 1020 aa11.55□□□□□ -0.56
Copb1-201ENSMUST00000033012 Lrrc1Q80VQ1 524 aa11.55□□□□□ -0.56
Copb1-201ENSMUST00000033012 Nek9Q8K1R7 984 aa11.55□□□□□ -0.56
Copb1-201ENSMUST00000033012 Myo3bQ1EG27 1305 aa11.55□□□□□ -0.56
Copb1-201ENSMUST00000033012 Aox2Q5SGK3 1345 aa11.55□□□□□ -0.56
Copb1-201ENSMUST00000033012 Ppfia1B2RXQ2 1266 aa11.55□□□□□ -0.56
Copb1-201ENSMUST00000033012 ItgadQ3V0T4 1168 aa11.55□□□□□ -0.56
Copb1-201ENSMUST00000033012 Itga6Q61739 1091 aa11.55□□□□□ -0.56
Copb1-201ENSMUST00000033012 Luzp1Q8R4U7 1068 aaKnown RBP11.55□□□□□ -0.56
Copb1-201ENSMUST00000033012 Prpf6Q91YR7 941 aaKnown RBP11.55□□□□□ -0.56
Copb1-201ENSMUST00000033012 Card14Q99KF0 999 aa11.55□□□□□ -0.56
Copb1-201ENSMUST00000033012 PdclQ9DBX2 301 aa11.55□□□□□ -0.56
Copb1-201ENSMUST00000033012 CltcQ68FD5 1675 aaKnown RBP11.55□□□□□ -0.56
Copb1-201ENSMUST00000033012 Ppp1r15aP17564 657 aa11.55□□□□□ -0.56
Copb1-201ENSMUST00000033012 Rnf40Q3U319 1001 aa11.55□□□□□ -0.56
Copb1-201ENSMUST00000033012 Gpatch3Q8BIY1 525 aa11.55□□□□□ -0.56
Copb1-201ENSMUST00000033012 Lztr1Q9CQ33 837 aa11.55□□□□□ -0.56
Copb1-201ENSMUST00000033012 Ccdc39Q9D5Y1 937 aa11.55□□□□□ -0.56
Copb1-201ENSMUST00000033012 Mrpl12Q9DB15 201 aaKnown RBP11.55□□□□□ -0.56
Copb1-201ENSMUST00000033012 Stat2Q9WVL2 923 aa11.55□□□□□ -0.56
Copb1-201ENSMUST00000033012 Stk36Q69ZM6 1316 aa11.55□□□□□ -0.56
Copb1-201ENSMUST00000033012 Prdm2A2A7B5 1709 aaKnown RBP11.54□□□□□ -0.56
Copb1-201ENSMUST00000033012 Tubb4bP68372 445 aaKnown RBP11.54□□□□□ -0.56
Copb1-201ENSMUST00000033012 Cct5P80316 541 aaKnown RBP11.54□□□□□ -0.56
Copb1-201ENSMUST00000033012 Ecm2Q5FW85 670 aa11.54□□□□□ -0.56
Copb1-201ENSMUST00000033012 Gpt2Q8BGT5 522 aa11.54□□□□□ -0.56
Copb1-201ENSMUST00000033012 Zc3h6Q8BYK8 1177 aa11.54□□□□□ -0.56
Copb1-201ENSMUST00000033012 Msantd4Q91YU3 345 aa11.54□□□□□ -0.56
Copb1-201ENSMUST00000033012 Syf2Q9D198 242 aaKnown RBP11.54□□□□□ -0.56
Copb1-201ENSMUST00000033012 Cabp2Q9JLK4 216 aa11.54□□□□□ -0.56
Copb1-201ENSMUST00000033012 Tcof1O08784 1320 aaKnown RBP11.54□□□□□ -0.56
Copb1-201ENSMUST00000033012 NpatQ8BMA5 1420 aa11.54□□□□□ -0.56
Copb1-201ENSMUST00000033012 Depdc5P61460 1591 aa11.54□□□□□ -0.56
Copb1-201ENSMUST00000033012 Akap2O54931 893 aa11.54□□□□□ -0.56
Copb1-201ENSMUST00000033012 Cdr2P97817 455 aa11.54□□□□□ -0.56
Copb1-201ENSMUST00000033012 Atp11aP98197 1187 aa11.54□□□□□ -0.56
Copb1-201ENSMUST00000033012 Ddx42Q810A7 929 aaKnown RBP11.54□□□□□ -0.56
Copb1-201ENSMUST00000033012 Trim6Q8BGE7 488 aa11.54□□□□□ -0.56
Copb1-201ENSMUST00000033012 Sp8Q8BMJ8 486 aa11.54□□□□□ -0.56
Copb1-201ENSMUST00000033012 Lrrc42Q8R2U7 421 aa11.54□□□□□ -0.56
Copb1-201ENSMUST00000033012 Tet3Q8BG87 1668 aa11.54□□□□□ -0.56
Copb1-201ENSMUST00000033012 Rgs22G3UYX5 1258 aa11.53□□□□□ -0.56
Copb1-201ENSMUST00000033012 Trerf1Q8BXJ2 1205 aa11.53□□□□□ -0.56
Copb1-201ENSMUST00000033012 Rab3il1Q8VDV3 383 aa11.53□□□□□ -0.56
Copb1-201ENSMUST00000033012 Ccdc191J3QQ27 883 aa11.53□□□□□ -0.56
Copb1-201ENSMUST00000033012 Dnajc5P60904 198 aa11.53□□□□□ -0.56
Copb1-201ENSMUST00000033012 Vsnl1P62761 191 aa11.53□□□□□ -0.56
Copb1-201ENSMUST00000033012 IqcgQ80W32 419 aa11.53□□□□□ -0.56
Copb1-201ENSMUST00000033012 Vipas39Q8BGQ1 491 aa11.53□□□□□ -0.56
Copb1-201ENSMUST00000033012 Nat10Q8K224 1024 aaKnown RBP11.53□□□□□ -0.56
Copb1-201ENSMUST00000033012 Nop2Q922K7 793 aaKnown RBP11.53□□□□□ -0.56
Copb1-201ENSMUST00000033012 Ankrd1Q9CR42 319 aa11.53□□□□□ -0.56
Copb1-201ENSMUST00000033012 TrdnE9Q9K5 693 aa11.53□□□□□ -0.56
Copb1-201ENSMUST00000033012 Tmed8Q3UHI4 326 aa11.53□□□□□ -0.56
Copb1-201ENSMUST00000033012 Chpf2Q3UU43 768 aa11.53□□□□□ -0.56
Copb1-201ENSMUST00000033012 Slc30a9Q5IRJ6 567 aa11.53□□□□□ -0.56
Copb1-201ENSMUST00000033012 Ccdc12Q8R344 166 aaKnown RBP11.53□□□□□ -0.56
Copb1-201ENSMUST00000033012 Mroh1E0CZ22 1640 aa11.52□□□□□ -0.56
Copb1-201ENSMUST00000033012 Cwc27Q3TKY6 469 aa11.52□□□□□ -0.56
Copb1-201ENSMUST00000033012 Usp27Q8CEG8 438 aa11.52□□□□□ -0.56
Copb1-201ENSMUST00000033012 Med1Q925J9 1575 aa11.52□□□□□ -0.56
Copb1-201ENSMUST00000033012 Slc1a4O35874 532 aa11.52□□□□□ -0.57
Copb1-201ENSMUST00000033012 Tubb5P99024 444 aaKnown RBP11.52□□□□□ -0.57
Copb1-201ENSMUST00000033012 Gnl3lQ6PGG6 577 aaKnown RBP11.52□□□□□ -0.57
Copb1-201ENSMUST00000033012 Cdc23Q8BGZ4 597 aa11.52□□□□□ -0.57
Copb1-201ENSMUST00000033012 Ppfibp1Q8C8U0 969 aaKnown RBP11.52□□□□□ -0.57
Copb1-201ENSMUST00000033012 Gle1Q8R322 699 aa11.52□□□□□ -0.57
Copb1-201ENSMUST00000033012 Acsbg1Q99PU5 721 aa11.52□□□□□ -0.57
Copb1-201ENSMUST00000033012 Tlr9Q9EQU3 1032 aa11.52□□□□□ -0.57
Copb1-201ENSMUST00000033012 Nek3Q9R0A5 511 aa11.52□□□□□ -0.57
Copb1-201ENSMUST00000033012 Psma5Q9Z2U1 241 aaKnown RBP11.52□□□□□ -0.57
Copb1-201ENSMUST00000033012 Uhrf1bp1lA2RSJ4 1457 aa11.52□□□□□ -0.57
Copb1-201ENSMUST00000033012 Folh1O35409 752 aa11.52□□□□□ -0.57
Copb1-201ENSMUST00000033012 Wee1P47810 646 aa11.52□□□□□ -0.57
Copb1-201ENSMUST00000033012 Gtf2f1Q3THK3 508 aaKnown RBP11.52□□□□□ -0.57
Copb1-201ENSMUST00000033012 Fchsd1Q6PFY1 688 aa11.52□□□□□ -0.57
Copb1-201ENSMUST00000033012 Sdad1Q80UZ2 687 aaKnown RBP11.52□□□□□ -0.57
Copb1-201ENSMUST00000033012 C1qtnf12Q8R2Z0 308 aa11.52□□□□□ -0.57
Copb1-201ENSMUST00000033012 Gnl2Q99LH1 728 aaKnown RBP11.52□□□□□ -0.57
Copb1-201ENSMUST00000033012 AdnpQ9Z103 1108 aaKnown RBP11.52□□□□□ -0.57
Copb1-201ENSMUST00000033012 Grin2dQ03391 1323 aa11.51□□□□□ -0.57
Copb1-201ENSMUST00000033012 Rbm8a2A0A0N4SUH6 174 aa11.51□□□□□ -0.57
Copb1-201ENSMUST00000033012 Ctdnep1Q3TP92 244 aa11.51□□□□□ -0.57
Copb1-201ENSMUST00000033012 PsdQ5DTT2 1024 aa11.51□□□□□ -0.57
Copb1-201ENSMUST00000033012 Zranb1Q7M760 708 aa11.51□□□□□ -0.57
Copb1-201ENSMUST00000033012 Dusp9Q7TNL7 452 aa11.51□□□□□ -0.57
Copb1-201ENSMUST00000033012 Mageb16Q9CWV4 363 aa11.51□□□□□ -0.57
Copb1-201ENSMUST00000033012 Rbm8aQ9CWZ3 174 aa11.51□□□□□ -0.57
Copb1-201ENSMUST00000033012 KynuQ9CXF0 464 aa11.51□□□□□ -0.57
Copb1-201ENSMUST00000033012 Atp1a3Q6PIC6 1013 aa11.51□□□□□ -0.57
Copb1-201ENSMUST00000033012 Drc7Q6V3W6 876 aa11.51□□□□□ -0.57
Copb1-201ENSMUST00000033012 Tubb6Q922F4 447 aa11.51□□□□□ -0.57
Copb1-201ENSMUST00000033012 Q9D1Z2 194 aa11.51□□□□□ -0.57
Copb1-201ENSMUST00000033012 Col4a3bpQ9EQG9 624 aa11.51□□□□□ -0.57
Copb1-201ENSMUST00000033012 Ehd4Q9EQP2 541 aa11.51□□□□□ -0.57
Copb1-201ENSMUST00000033012 Irx6Q9ER75 438 aa11.51□□□□□ -0.57
Copb1-201ENSMUST00000033012 Hip1rQ9JKY5 1068 aa11.51□□□□□ -0.57
Copb1-201ENSMUST00000033012 Kidins220E9Q9B7 1793 aa11.51□□□□□ -0.57
Copb1-201ENSMUST00000033012 Diaph1O08808 1255 aa11.5□□□□□ -0.57
Copb1-201ENSMUST00000033012 ItpripQ3TNL8 555 aa11.5□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 15.9 ms