RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Pcdhb15Q91Y04 786 aa12.5□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Ssfa2Q922B9 1252 aa12.5□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Wdr33Q8K4P0 1330 aaKnown RBP12.5□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Plekhd1B2RPU2 505 aa12.49□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Hoxa7P02830 229 aa12.49□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Usp28Q5I043 1051 aa12.49□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Ppp1r10Q80W00 888 aaKnown RBP12.49□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Frmd3Q8BHD4 595 aa12.49□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Gigyf1Q99MR1 1044 aaKnown RBP12.49□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Gm45140A0A0N4SUM8 220 aa12.49□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Cyp2d34L7N463 504 aa12.49□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Slx1bQ8BX32 270 aa12.49□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 ZgpatQ8VDM1 511 aa12.49□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Rbm42Q91V81 474 aaKnown RBP12.49□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 SrrtQ99MR6 875 aaKnown RBP12.49□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 HdgfP51859 237 aaKnown RBP12.48□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 CebpaP53566 359 aa12.48□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Cap2Q9CYT6 476 aa12.48□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Cdhr2E9Q7P9 1308 aa12.48□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Tpd52l1O54818 204 aa12.48□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Hspd1P63038 573 aaKnown RBP12.48□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Slc20a2Q80UP8 656 aa12.48□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Srgap1Q91Z69 1062 aa12.48□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Ccer1Q9CQL2 403 aa12.48□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Mrps25Q9D125 171 aaKnown RBP12.48□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Hmg20bQ9Z104 317 aa12.48□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Ddx60E9PZQ1 1711 aa12.48□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 1700113H08RikE9Q9Q5 327 aa12.48□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Aox1O54754 1333 aa12.48□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 SnrkQ8VDU5 748 aa12.48□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Limch1Q3UH68 1057 aa12.47□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 GapdhsQ64467 440 aa12.47□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Gm21985Q6P6P5 1106 aa12.47□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Arid5bQ8BM75 1188 aaKnown RBP12.47□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 AidaQ8C4Q6 305 aa12.47□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Tmc2Q8R4P4 888 aa12.47□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Erc1Q99MI1 1120 aa12.47□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Irx5Q9JKQ4 484 aa12.47□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Ubr2Q6WKZ8 1755 aa12.47□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Ccnl1Q52KE7 532 aaKnown RBP12.47□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Hook1Q8BIL5 728 aa12.47□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Usp44Q8C2S0 711 aa12.47□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 CerkQ8K4Q7 531 aa12.47□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Slc4a1P04919 929 aa12.46□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Dnajc2P54103 621 aaKnown RBP12.46□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Nol10Q5RJG1 687 aaKnown RBP12.46□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Smg7Q5RJH6 1138 aaKnown RBP12.46□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 NfkbibQ60778 359 aa12.46□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Ccdc82Q6PG04 518 aa12.46□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 R3hcc1Q8BSI6 488 aa12.46□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Pwp2Q8BU03 919 aaKnown RBP12.46□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Inpp5bQ8K337 993 aa12.46□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Krt25Q8VCW2 446 aa12.46□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Ccne2Q9Z238 404 aa12.46□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Dync1i1O88485 628 aa12.46□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Tbc1d30Q69ZT9 766 aa12.46□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Sept12Q9D451 317 aa12.46□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Eya2O08575 532 aa12.46□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Ncbp1Q3UYV9 790 aaKnown RBP12.46□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Rbm33Q9CXK9 1231 aaKnown RBP12.46□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Sil1Q9EPK6 465 aa12.46□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 TnksQ6PFX9 1320 aa12.45□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Bin1O08539 588 aaKnown RBP12.45□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Prdm1Q60636 856 aa12.45□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 RbsnQ80Y56 783 aa12.45□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 EzrP26040 586 aaKnown RBP12.45□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 RubcnlQ3TD16 648 aa12.45□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Hmx1O70218 332 aa12.44□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Csrnp1P59054 583 aa12.44□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Smc4Q8CG47 1286 aa12.44□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Alg3Q8K2A8 438 aa12.44□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 ApobrQ8VBT6 942 aa12.44□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Lrrc2Q8VDB8 371 aa12.44□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Mrpl44Q9CY73 333 aaKnown RBP12.44□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Gm29094F6Q785 221 aa12.44□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 VeztQ3ZK22 780 aa12.44□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Lmod1Q8BVA4 595 aa12.44□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Rufy2Q8R4C2 606 aa12.44□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Hps3Q91VB4 1002 aa12.44□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Fam213aQ9CYH2 218 aa12.44□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 MthfsQ9D110 203 aa12.44□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Syt10Q9R0N4 523 aa12.44□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Cfap58B2RW38 873 aa12.43□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Nlrp1aQ2LKU9 1182 aa12.43□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Gsdma2Q32M21 443 aa12.43□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Nxf2Q4ZGD8 691 aa12.43□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Myl10Q62082 202 aa12.43□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Morc2aQ69ZX6 1030 aa12.43□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Ppp4r3aQ6P2K6 820 aa12.43□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Larp6Q8BN59 492 aa12.43□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 AatfQ9JKX4 526 aaKnown RBP12.43□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Tbc1d8Q9Z1A9 1134 aa12.43□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Vmn2r23E9PXI5 849 aa12.43□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 AK157302I3ITR1 129 aa12.43□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Irf6P97431 467 aa12.43□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Oxsr1Q6P9R2 527 aa12.43□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Trim52Q8CDV4 233 aa12.43□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Isca1Q9D924 129 aa12.43□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Pard3Q99NH2 1333 aa12.43□□□□□ -0.42
Ptcd1-201ENSMUST00000031628 Trim30aP15533 496 aa12.43□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms