RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Dnm1P39053 867 aa15.69■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Tbc1d31Q6NXY1 996 aa15.69■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Irf9Q61179 399 aa15.69■□□□□ 0.1
Col5a1-201ENSMUST00000028280 KdrP35918 1367 aa15.69■□□□□ 0.1
Col5a1-201ENSMUST00000028280 DroshaQ5HZJ0 1373 aaKnown RBP15.69■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Ccdc160Q3UYG1 323 aa15.69■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Myo6Q64331 1265 aa15.69■□□□□ 0.1
Col5a1-201ENSMUST00000028280 HhatQ8BMT9 499 aa15.69■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Bag2Q91YN9 210 aa15.69■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Pnpla2Q8BJ56 486 aa15.69■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Snx25Q3ZT31 840 aa15.68■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Slc5a1Q8C3K6 665 aa15.68■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Pde6cQ91ZQ1 861 aa15.68■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Grpel1Q99LP6 217 aa15.68■□□□□ 0.1
Col5a1-201ENSMUST00000028280 LlphQ9D945 130 aaKnown RBP15.68■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Actn2Q9JI91 894 aa15.68■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Skida1Q80YR3 822 aa15.68■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Triml1Q8BVP1 470 aa15.68■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Dph6Q9CQ28 267 aa15.68■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Gnat3Q3V3I2 354 aa15.68■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Pde4dQ01063 747 aa15.68■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Zfyve27Q3TXX3 415 aa15.68■□□□□ 0.1
Col5a1-201ENSMUST00000028280 ErmnQ5EBJ4 281 aa15.68■□□□□ 0.1
Col5a1-201ENSMUST00000028280 GphnQ8BUV3 769 aaKnown RBP15.68■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Cog7Q3UM29 770 aa15.68■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Nuf2Q99P69 463 aa15.68■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Zmat2Q9CPW7 199 aa15.68■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Rfwd2Q9R1A8 733 aaKnown RBP15.68■□□□□ 0.1
Col5a1-201ENSMUST00000028280 HellsQ60848 821 aa15.68■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Satb1Q60611 764 aa15.68■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Igbp1Q61249 340 aa15.68■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Jmjd4Q8BFT6 427 aa15.68■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Tyro3P55144 880 aa15.67■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Ttc21bQ0HA38 1315 aa15.67■□□□□ 0.1
Col5a1-201ENSMUST00000028280 L3mbtl2P59178 703 aa15.67■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Tcerg1lQ3B807 590 aa15.67■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Trim17Q7TPM3 477 aa15.67■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Atp6v0a4Q920R6 833 aa15.67■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Bicdl1A0JNT9 577 aa15.67■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Gm6583E9Q8Z1 469 aa15.67■□□□□ 0.1
Col5a1-201ENSMUST00000028280 VeztQ3ZK22 780 aa15.67■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Cep85Q8BMK0 761 aa15.67■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Ophn1Q99J31 802 aa15.67■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Hmgb1P63158 215 aaKnown RBP15.67■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Myo1bP46735 1107 aa15.67■□□□□ 0.1
Col5a1-201ENSMUST00000028280 SbdsP70122 250 aa15.67■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Cnnm2Q3TWN3 875 aa15.67■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Luc7l2Q7TNC4 392 aaKnown RBP15.67■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Ankrd26Q811D2 1581 aa15.67■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Atp8b3Q6UQ17 1335 aa15.67■□□□□ 0.1
Col5a1-201ENSMUST00000028280 AqrQ8CFQ3 1481 aaKnown RBP15.67■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Ppfia1B2RXQ2 1266 aa15.66■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Speer2E9Q9U2 264 aa15.66■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Asic1Q6NXK8 526 aa15.66■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Apol7bB1AQP7 369 aa15.66■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Krt90E9Q1Z0 538 aa15.66■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Izumo3A6PWV3 263 aa15.66■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Cavin2Q63918 418 aaKnown RBP15.66■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Zfp251Q6PCX8 632 aa15.66■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Depdc1bQ8BH88 529 aa15.66■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Atxn3Q9CVD2 355 aa15.66■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Nup62clA2AG10 272 aa15.66■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Gm21985Q6P6P5 1106 aa15.66■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Hdac9Q99N13 588 aa15.65■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Gipc1Q9Z0G0 333 aa15.65■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Smc6Q924W5 1097 aa15.65■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Il1rapl2Q9ERS6 686 aa15.65■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Kif21bQ9QXL1 1668 aa15.65■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Tacc2Q9JJG0 1149 aa15.65■□□□□ 0.1
Col5a1-201ENSMUST00000028280 ChkbO55229 394 aa15.65■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Becn2P0DM65 447 aa15.65■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Ift20Q61025 132 aa15.65■□□□□ 0.1
Col5a1-201ENSMUST00000028280 SynmQ70IV5 1561 aa15.65■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Stx8O88983 236 aa15.65■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Prpf31Q8CCF0 499 aaKnown RBP15.65■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Trak2Q6P9N8 913 aa15.65■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Atp1a2Q6PIE5 1020 aa15.65■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Ppip5k1A2ARP1 1436 aa15.64■□□□□ 0.1
Col5a1-201ENSMUST00000028280 Ncoa1P70365 1447 aa15.64■□□□□ 0.1
Col5a1-201ENSMUST00000028280 U2af1l4Q8BGJ9 220 aa15.64■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Zbtb43Q9DAI4 467 aa15.64■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Gm14025A2AP89 1413 aa15.64■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Sycp2lA0A0M3U1B0 842 aa15.64■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Lrriq3Q14DL3 633 aa15.64■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Cwc25Q9DBF7 416 aa15.64■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Hs6st3Q9QYK4 470 aa15.64■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Spocd1B1ASB6 936 aa15.64■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Usp5P56399 858 aaKnown RBP15.64■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Mum1l1Q4VA55 681 aa15.64■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Zkscan4Q5SZT6 480 aa15.64■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Mrps27Q8BK72 415 aaKnown RBP15.64■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Spata16Q8C636 571 aa15.64■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Fam163aQ8CAA5 168 aa15.64■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Ccdc92Q8VDN4 314 aa15.64■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Camsap1A2AHC3 1581 aa15.64■□□□□ 0.09
Col5a1-201ENSMUST00000028280 A2mQ6GQT1 1474 aa15.64■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Slc1a4O35874 532 aa15.64■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Ptpn14Q62130 1189 aa15.63■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Mtmr7Q9Z2C9 660 aa15.63■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Ccdc175E9PVB3 822 aa15.63■□□□□ 0.09
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms