RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 TsksO54887 585 aa17.65■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Ftl2P49945 183 aa17.65■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Inpp5bQ8K337 993 aa17.65■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Mylk2Q8VCR8 613 aa17.65■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Ppil4Q9CXG3 492 aaKnown RBP17.65■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Osbpl5Q9ER64 874 aa17.65■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Tbc1d8Q9Z1A9 1134 aa17.65■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Ccne2Q9Z238 404 aa17.65■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Tpm3P21107 285 aaKnown RBP17.65■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Ccdc82Q6PG04 518 aa17.65■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Clca2Q8BG22 942 aa17.65■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Aox4Q3TYQ9 1336 aa17.64■□□□□ 0.42
Nkx3-1-201ENSMUST00000022646 Hook1Q8BIL5 728 aa17.64■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Rps6ka5Q8C050 863 aa17.64■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Shisa4Q8CA71 197 aa17.64■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Tmem109Q3UBX0 243 aa17.64■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Zkscan8Q8BSL0 588 aa17.64■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Pcdhb15Q91Y04 786 aa17.64■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Pard3Q99NH2 1333 aa17.64■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Kif3aP28741 701 aa17.63■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Atp1a3Q6PIC6 1013 aa17.63■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 ApobrQ8VBT6 942 aa17.63■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Ppp4r3bQ922R5 820 aa17.63■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Cyp19a1P28649 503 aa17.63■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Alg3Q8K2A8 438 aa17.63■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Kcnq3Q8K3F6 873 aa17.63■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Nrbp1Q99J45 535 aa17.63■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Crb1Q8VHS2 1405 aa17.63■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Gnl3lQ6PGG6 577 aaKnown RBP17.63■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Ccer1Q9CQL2 403 aa17.63■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Scn4aQ9ER60 1841 aa17.62■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Gpr182P43142 395 aa17.62■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Map10Q8BJS7 891 aa17.62■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Tnrc6cQ3UHC0 1690 aaKnown RBP17.62■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Vmn2r23E9PXI5 849 aa17.62■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Ubxn4Q8VCH8 506 aa17.62■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Terf2ipQ91VL8 393 aa17.62■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Pald1P70261 859 aa17.61■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 LyarQ08288 388 aaKnown RBP17.61■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Brinp3Q499E0 766 aa17.61■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Gpatch3Q8BIY1 525 aa17.61■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Serpina10Q8R121 448 aa17.61■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Col4a3bpQ9EQG9 624 aa17.61■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Kdm3aQ6PCM1 1323 aa17.61■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Clec11aO88200 328 aa17.61■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Snw1Q9CSN1 536 aaKnown RBP17.61■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Carmil3Q3UFQ8 1375 aa17.61■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Ano6Q6P9J9 911 aa17.61■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 U2af1l4Q8BGJ9 220 aa17.61■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Tsen34Q8BMZ5 316 aa17.61■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Hnrnpul1Q8VDM6 859 aaKnown RBP17.61■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Gigyf1Q99MR1 1044 aaKnown RBP17.61■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Nip7Q9CXK8 180 aaKnown RBP17.61■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Appbp2Q9DAX9 585 aa17.61■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Sik3Q6P4S6 1311 aa17.6■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Atp2b3Q0VF55 1220 aa17.6■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Grpel1Q99LP6 217 aa17.6■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Cfap99A0A140LIX9 648 aa17.6■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Cdca8Q8BHX3 289 aa17.6■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Shank3Q4ACU6 1730 aa17.6■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Nwd2Q6P5U7 1742 aa17.6■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Atp8a2P98200 1148 aa17.59■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Cers3Q1A3B0 383 aa17.59■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Taok2Q6ZQ29 1240 aa17.59■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Tmem59lQ7TNI2 337 aa17.59■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Cep55Q8BT07 462 aa17.59■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Smim5Q8BT42 78 aa17.59■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Gm973E9Q295 1059 aa17.59■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Rrp1P56183 494 aaKnown RBP17.59■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Gpatch11Q3UFS4 262 aa17.59■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Dusp10Q9ESS0 483 aa17.59■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Syt10Q9R0N4 523 aa17.59■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Tpd52l1O54818 204 aa17.59■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Fam160b2Q80YR2 744 aa17.59■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 ImmtQ8CAQ8 757 aaKnown RBP17.59■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Rbm42Q91V81 474 aaKnown RBP17.59■□□□□ 0.41
Nkx3-1-201ENSMUST00000022646 Plcb3P51432 1234 aaKnown RBP17.58■□□□□ 0.4
Nkx3-1-201ENSMUST00000022646 Edrf1Q6GQV7 1239 aa17.58■□□□□ 0.4
Nkx3-1-201ENSMUST00000022646 SdsQ8VBT2 327 aa17.58■□□□□ 0.4
Nkx3-1-201ENSMUST00000022646 Stx1aO35526 288 aa17.58■□□□□ 0.4
Nkx3-1-201ENSMUST00000022646 Sipa1l3G3X9J0 1776 aa17.58■□□□□ 0.4
Nkx3-1-201ENSMUST00000022646 Nav1Q8CH77 1875 aa17.57■□□□□ 0.4
Nkx3-1-201ENSMUST00000022646 Irf5P56477 497 aa17.57■□□□□ 0.4
Nkx3-1-201ENSMUST00000022646 Emilin1Q99K41 1017 aa17.57■□□□□ 0.4
Nkx3-1-201ENSMUST00000022646 Ubn2Q80WC1 1314 aa17.57■□□□□ 0.4
Nkx3-1-201ENSMUST00000022646 Fsd2Q8BZ52 692 aa17.57■□□□□ 0.4
Nkx3-1-201ENSMUST00000022646 RdxP26043 583 aaKnown RBP17.56■□□□□ 0.4
Nkx3-1-201ENSMUST00000022646 Cnot6lQ8VEG6 555 aa17.56■□□□□ 0.4
Nkx3-1-201ENSMUST00000022646 Cops6O88545 324 aa17.56■□□□□ 0.4
Nkx3-1-201ENSMUST00000022646 MsnP26041 577 aaKnown RBP17.56■□□□□ 0.4
Nkx3-1-201ENSMUST00000022646 Nlrp9aQ66X03 949 aa17.56■□□□□ 0.4
Nkx3-1-201ENSMUST00000022646 Tbc1d7Q9D0K0 293 aa17.56■□□□□ 0.4
Nkx3-1-201ENSMUST00000022646 Naa16Q9DBB4 864 aa17.56■□□□□ 0.4
Nkx3-1-201ENSMUST00000022646 Clic4Q9QYB1 253 aa17.56■□□□□ 0.4
Nkx3-1-201ENSMUST00000022646 Atp2b1G5E829 1220 aa17.56■□□□□ 0.4
Nkx3-1-201ENSMUST00000022646 Cyp2d9P11714 504 aa17.56■□□□□ 0.4
Nkx3-1-201ENSMUST00000022646 Sall1Q9ER74 1322 aa17.56■□□□□ 0.4
Nkx3-1-201ENSMUST00000022646 Kcnq5Q9JK45 933 aa17.55■□□□□ 0.4
Nkx3-1-201ENSMUST00000022646 Cnpy2Q9QXT0 182 aa17.55■□□□□ 0.4
Nkx3-1-201ENSMUST00000022646 Hdac6Q9Z2V5 1149 aa17.55■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 67.6 ms