RNA–Protein interactions for RNA: ENSMUST00000004507.10

Ddx56-201, Transcript of Probable ATP-dependent RNA helicase DDX56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx56, Length 1,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56-201ENSMUST00000004507 LratQ9JI60 231 aa13.4□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Zbtb22Q9Z0G7 638 aa13.4□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Irgm2A0A140LIF8 407 aa13.39□□□□□ -0.27
Ddx56-201ENSMUST00000004507 EzrP26040 586 aaKnown RBP13.39□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Cyp19a1P28649 503 aa13.39□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Ddx46Q569Z5 1032 aaKnown RBP13.39□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Ezh2Q61188 746 aaKnown RBP13.39□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Tbc1d31Q6NXY1 996 aa13.39□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Msl1Q6PDM1 616 aa13.39□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Usp44Q8C2S0 711 aa13.39□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Mb21d2Q8C525 428 aa13.39□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Mknk2Q8CDB0 459 aa13.39□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Tmc2Q8R4P4 888 aa13.39□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Lrrfip2Q91WK0 415 aa13.39□□□□□ -0.27
Ddx56-201ENSMUST00000004507 ZwintQ9CQU5 252 aa13.39□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Utp3Q9JI13 469 aaKnown RBP13.39□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Mapk8ip1Q9WVI9 707 aa13.39□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Plch1Q4KWH5 1682 aa13.39□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Kif23E9Q5G3 953 aa13.38□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Ctdnep1Q3TP92 244 aa13.38□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Hvcn1Q3U2S8 269 aa13.38□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Susd4Q8BH32 490 aa13.38□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Plcd1Q8R3B1 756 aa13.38□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Add3Q9QYB5 706 aaKnown RBP13.38□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Zc3h12cQ5DTV4 884 aa13.38□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Atg9aQ68FE2 551 aa13.38□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Fam102bQ8BQS4 339 aa13.38□□□□□ -0.27
Ddx56-201ENSMUST00000004507 R3hcc1Q8BSI6 488 aa13.38□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Ndufa8Q9DCJ5 172 aa13.38□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Krt85Q9Z2T6 507 aa13.38□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Prl3d2F6R3P9 224 aa13.37□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Usp25P57080 1055 aa13.37□□□□□ -0.27
Ddx56-201ENSMUST00000004507 CgnP59242 1191 aa13.37□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Clca2Q8BG22 942 aa13.37□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Iffo2Q8R2V2 512 aa13.37□□□□□ -0.27
Ddx56-201ENSMUST00000004507 OscarQ8VBT3 265 aa13.37□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Srgap1Q91Z69 1062 aa13.37□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Ubn2Q80WC1 1314 aa13.37□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Greb1lB9EJV3 1913 aa13.37□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Stox1B2RQL2 990 aa13.36□□□□□ -0.27
Ddx56-201ENSMUST00000004507 CltaO08585 235 aa13.36□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Znf692Q3U381 531 aa13.36□□□□□ -0.27
Ddx56-201ENSMUST00000004507 BcanQ61361 883 aa13.36□□□□□ -0.27
Ddx56-201ENSMUST00000004507 ZyxQ62523 564 aa13.36□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Ptcd1Q8C2E4 695 aaKnown RBP13.36□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Ttc27Q8CD92 847 aa13.36□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Smc4Q8CG47 1286 aa13.36□□□□□ -0.27
Ddx56-201ENSMUST00000004507 CpzQ8R4V4 654 aa13.36□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Chrna2Q91X60 512 aa13.36□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Rrs1Q9CYH6 365 aaKnown RBP13.36□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Zfyve9A2A8R0 1397 aa13.36□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Pde4bB1AWC9 736 aa13.36□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Ccdc85cE9Q6B2 420 aa13.36□□□□□ -0.27
Ddx56-201ENSMUST00000004507 TrdnE9Q9K5 693 aa13.36□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Cops6O88545 324 aa13.36□□□□□ -0.27
Ddx56-201ENSMUST00000004507 NpeppsQ11011 920 aa13.36□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Snx13Q6PHS6 957 aa13.36□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Golim4Q8BXA1 655 aa13.36□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Mx2Q9WVP9 655 aa13.36□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Npc1l1Q6T3U4 1333 aa13.36□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Pdia4P08003 638 aaKnown RBP13.35□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Rtkn2Q14B46 604 aa13.35□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Gimap8Q75N62 688 aa13.35□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Ano1Q8BHY3 960 aa13.35□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Ccdc158Q8CDI6 1109 aa13.35□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Ripk4Q9ERK0 786 aa13.35□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Foxo4Q9WVH3 505 aa13.35□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Zkscan7E9PVW1 718 aa13.34□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Eya2O08575 532 aa13.34□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Prl7a2O54831 253 aa13.34□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Npy5rO70342 466 aa13.34□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Slurp2P0DP59 97 aa13.34□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Gsdma2Q32M21 443 aa13.34□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Mctp2Q5RJH2 878 aa13.34□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Cyp7a1Q64505 503 aa13.34□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Rbm26Q6NZN0 1012 aaKnown RBP13.34□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Smarcc2Q6PDG5 1213 aa13.34□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Rassf8Q8CJ96 419 aa13.34□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Krt25Q8VCW2 446 aa13.34□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Rtn4Q99P72 1162 aaKnown RBP13.34□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Rdm1Q9CQK3 281 aa13.34□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Mmel1Q9JLI3 765 aa13.34□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Pde3aQ9Z0X4 1141 aa13.34□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Cspp1B2RX88 1205 aa13.34□□□□□ -0.27
Ddx56-201ENSMUST00000004507 NcapgE9PWG6 1004 aa13.34□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Cfap157Q0VFX2 523 aa13.34□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Limch1Q3UH68 1057 aa13.34□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Ubash3aQ3V3E1 624 aa13.34□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Tex2Q6ZPJ0 1128 aaKnown RBP13.34□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Tmem266Q8BZB3 538 aa13.34□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Ciao1Q99KN2 339 aa13.34□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Chmp3Q9CQ10 224 aa13.34□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Sh3bp5Q9Z131 463 aa13.34□□□□□ -0.27
Ddx56-201ENSMUST00000004507 Duox1A2AQ92 1551 aa13.33□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Cyp2d10P24456 504 aa13.33□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Tyro3P55144 880 aa13.33□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Timm10P62073 90 aa13.33□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Lins1Q3U1D0 764 aa13.33□□□□□ -0.28
Ddx56-201ENSMUST00000004507 Gm21985Q6P6P5 1106 aa13.33□□□□□ -0.28
Ddx56-201ENSMUST00000004507 TnmdQ9EP64 317 aa13.33□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms