RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 CD40P25942 277 aa9.73□□□□□ -0.85
VMP1-207ENST00000588131 THBS4P35443 961 aa9.73□□□□□ -0.85
VMP1-207ENST00000588131 GNALP38405 381 aa9.73□□□□□ -0.85
VMP1-207ENST00000588131 DDOSTP39656 456 aa9.73□□□□□ -0.85
VMP1-207ENST00000588131 SORDQ00796 357 aa9.73□□□□□ -0.85
VMP1-207ENST00000588131 HNRNPA0Q13151 305 aaKnown RBP9.73□□□□□ -0.85
VMP1-207ENST00000588131 OR8B8Q15620 311 aa9.73□□□□□ -0.85
VMP1-207ENST00000588131 XKRXQ6PP77 449 aa9.73□□□□□ -0.85
VMP1-207ENST00000588131 MRPL21Q7Z2W9 205 aaKnown RBP9.73□□□□□ -0.85
VMP1-207ENST00000588131 CCDC54Q8NEL0 328 aa9.73□□□□□ -0.85
VMP1-207ENST00000588131 DNAAF1Q8NEP3 725 aa9.73□□□□□ -0.85
VMP1-207ENST00000588131 SEMA6DQ8NFY4 1073 aa9.73□□□□□ -0.85
VMP1-207ENST00000588131 OR51A2Q8NGJ7 313 aa9.73□□□□□ -0.85
VMP1-207ENST00000588131 SLC25A40Q8TBP6 338 aa9.73□□□□□ -0.85
VMP1-207ENST00000588131 SLC25A46Q96AG3 418 aa9.73□□□□□ -0.85
VMP1-207ENST00000588131 LRRC46Q96FV0 321 aa9.73□□□□□ -0.85
VMP1-207ENST00000588131 REPIN1Q9BWE0 567 aaKnown RBP9.73□□□□□ -0.85
VMP1-207ENST00000588131 OR2J1Q9GZK6 312 aa9.73□□□□□ -0.85
VMP1-207ENST00000588131 SLIRPQ9GZT3 109 aaKnown RBP9.73□□□□□ -0.85
VMP1-207ENST00000588131 PPP1R3EQ9H7J1 279 aa9.73□□□□□ -0.85
VMP1-207ENST00000588131 PLEKHA1Q9HB21 404 aa9.73□□□□□ -0.85
VMP1-207ENST00000588131 NPDC1Q9NQX5 325 aaPredicted RBP9.73□□□□□ -0.85
VMP1-207ENST00000588131 CCDC59Q9P031 241 aaKnown RBP9.73□□□□□ -0.85
VMP1-207ENST00000588131 FOXJ3Q9UPW0 622 aa9.73□□□□□ -0.85
VMP1-207ENST00000588131 PIGLQ9Y2B2 252 aa9.73□□□□□ -0.85
VMP1-207ENST00000588131 HCFC1P51610 2035 aa9.72□□□□□ -0.85
VMP1-207ENST00000588131 RP1L1Q8IWN7 2480 aaPredicted RBP9.72□□□□□ -0.85
VMP1-207ENST00000588131 DHRS7CA6NNS2 312 aa9.72□□□□□ -0.85
VMP1-207ENST00000588131 ATP6V1G2-DDX39BF2Z307 99 aa9.72□□□□□ -0.85
VMP1-207ENST00000588131 MTRF1O75570 445 aaKnown RBP9.72□□□□□ -0.85
VMP1-207ENST00000588131 CRYAAP02489 173 aa9.72□□□□□ -0.85
VMP1-207ENST00000588131 RAB3BP20337 219 aa9.72□□□□□ -0.85
VMP1-207ENST00000588131 CFL1P23528 166 aaKnown RBP9.72□□□□□ -0.85
VMP1-207ENST00000588131 MAP2K3P46734 347 aa9.72□□□□□ -0.85
VMP1-207ENST00000588131 RIPPLY1Q0D2K3 151 aa9.72□□□□□ -0.85
VMP1-207ENST00000588131 DGUOKQ16854 277 aa9.72□□□□□ -0.85
VMP1-207ENST00000588131 DMRTC1Q5HYR2 192 aa9.72□□□□□ -0.85
VMP1-207ENST00000588131 TMEM255AQ5JRV8 349 aa9.72□□□□□ -0.85
VMP1-207ENST00000588131 ZNF529Q6P280 563 aa9.72□□□□□ -0.85
VMP1-207ENST00000588131 PGAP1Q75T13 922 aa9.72□□□□□ -0.85
VMP1-207ENST00000588131 SSX8Q7RTT4 187 aa9.72□□□□□ -0.85
VMP1-207ENST00000588131 TPRA1Q86W33 373 aa9.72□□□□□ -0.85
VMP1-207ENST00000588131 SERPINA12Q8IW75 414 aa9.72□□□□□ -0.85
VMP1-207ENST00000588131 OR1M1Q8NGA1 313 aa9.72□□□□□ -0.85
VMP1-207ENST00000588131 OR56B2PQ8NGI1 322 aa9.72□□□□□ -0.85
VMP1-207ENST00000588131 OR5L1Q8NGL2 311 aa9.72□□□□□ -0.85
VMP1-207ENST00000588131 OR13C9Q8NGT0 318 aa9.72□□□□□ -0.85
VMP1-207ENST00000588131 CMBLQ96DG6 245 aa9.72□□□□□ -0.85
VMP1-207ENST00000588131 NKX3-1Q99801 234 aaPredicted RBP9.72□□□□□ -0.85
VMP1-207ENST00000588131 SLITRK2Q9H156 845 aa9.72□□□□□ -0.85
VMP1-207ENST00000588131 ZCCHC4Q9H5U6 513 aa9.72□□□□□ -0.85
VMP1-207ENST00000588131 PLEKHB1Q9UF11 243 aaPredicted RBP9.72□□□□□ -0.85
VMP1-207ENST00000588131 SMG1Q96Q15 3661 aaKnown RBP9.72□□□□□ -0.85
VMP1-207ENST00000588131 PRR14LQ5THK1 2151 aa9.71□□□□□ -0.85
VMP1-207ENST00000588131 RTTNQ86VV8 2226 aa9.71□□□□□ -0.85
VMP1-207ENST00000588131 IGKV1-9A0A0C4DH69 117 aa9.71□□□□□ -0.86
VMP1-207ENST00000588131 GGT3PA6NGU5 568 aa9.71□□□□□ -0.86
VMP1-207ENST00000588131 PDCD5O14737 125 aa9.71□□□□□ -0.86
VMP1-207ENST00000588131 LILRA1O75019 489 aa9.71□□□□□ -0.86
VMP1-207ENST00000588131 RNF224P0DH78 156 aa9.71□□□□□ -0.86
VMP1-207ENST00000588131 SLC2A2P11168 524 aaPredicted RBP9.71□□□□□ -0.86
VMP1-207ENST00000588131 PTAFRP25105 342 aa9.71□□□□□ -0.86
VMP1-207ENST00000588131 MPV17P39210 176 aa9.71□□□□□ -0.86
VMP1-207ENST00000588131 RAD52P43351 418 aa9.71□□□□□ -0.86
VMP1-207ENST00000588131 RORCP51449 518 aa9.71□□□□□ -0.86
VMP1-207ENST00000588131 NKX6-1P78426 367 aaPredicted RBP9.71□□□□□ -0.86
VMP1-207ENST00000588131 BSPH1Q075Z2 132 aa9.71□□□□□ -0.86
VMP1-207ENST00000588131 SNTB2Q13425 540 aaKnown RBP9.71□□□□□ -0.86
VMP1-207ENST00000588131 UBE2V2Q15819 145 aa9.71□□□□□ -0.86
VMP1-207ENST00000588131 MSMPQ1L6U9 139 aa9.71□□□□□ -0.86
VMP1-207ENST00000588131 OR2T2Q6IF00 324 aa9.71□□□□□ -0.86
VMP1-207ENST00000588131 SFXN4Q6P4A7 337 aa9.71□□□□□ -0.86
VMP1-207ENST00000588131 TMEM108Q6UXF1 575 aa9.71□□□□□ -0.86
VMP1-207ENST00000588131 FBXW12Q6X9E4 464 aa9.71□□□□□ -0.86
VMP1-207ENST00000588131 RNF144BQ7Z419 303 aa9.71□□□□□ -0.86
VMP1-207ENST00000588131 OR5AS1Q8N127 324 aa9.71□□□□□ -0.86
VMP1-207ENST00000588131 MARS2Q96GW9 593 aaKnown RBP9.71□□□□□ -0.86
VMP1-207ENST00000588131 RADILQ96JH8 1075 aa9.71□□□□□ -0.86
VMP1-207ENST00000588131 DACH2Q96NX9 599 aa9.71□□□□□ -0.86
VMP1-207ENST00000588131 BCL2L14Q9BZR8 327 aa9.71□□□□□ -0.86
VMP1-207ENST00000588131 CHST5Q9GZS9 411 aa9.71□□□□□ -0.86
VMP1-207ENST00000588131 OPA3Q9H6K4 179 aa9.71□□□□□ -0.86
VMP1-207ENST00000588131 GPR173Q9NS66 373 aa9.71□□□□□ -0.86
VMP1-207ENST00000588131 CKLFQ9UBR5 152 aa9.71□□□□□ -0.86
VMP1-207ENST00000588131 NDRG3Q9UGV2 375 aa9.71□□□□□ -0.86
VMP1-207ENST00000588131 FZR1Q9UM11 496 aa9.71□□□□□ -0.86
VMP1-207ENST00000588131 PCNX1Q96RV3 2341 aa9.7□□□□□ -0.86
VMP1-207ENST00000588131 ZNF816-ZNF321PA0A0X1KG74 233 aa9.7□□□□□ -0.86
VMP1-207ENST00000588131 ANXA2P2A6NMY6 339 aa9.7□□□□□ -0.86
VMP1-207ENST00000588131 CD300LBA8K4G0 201 aa9.7□□□□□ -0.86
VMP1-207ENST00000588131 NOTOA8MTQ0 251 aa9.7□□□□□ -0.86
VMP1-207ENST00000588131 C19orf84I3L1E1 186 aa9.7□□□□□ -0.86
VMP1-207ENST00000588131 ABCD4O14678 606 aa9.7□□□□□ -0.86
VMP1-207ENST00000588131 SULT1B1O43704 296 aa9.7□□□□□ -0.86
VMP1-207ENST00000588131 ATF1P18846 271 aa9.7□□□□□ -0.86
VMP1-207ENST00000588131 RAB3AP20336 220 aa9.7□□□□□ -0.86
VMP1-207ENST00000588131 THBS2P35442 1172 aa9.7□□□□□ -0.86
VMP1-207ENST00000588131 SOX6P35712 828 aa9.7□□□□□ -0.86
VMP1-207ENST00000588131 PPP3R1P63098 170 aa9.7□□□□□ -0.86
VMP1-207ENST00000588131 PSG7Q13046 419 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms