RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 CADP27708 2225 aa9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 CHD3Q12873 2000 aaKnown RBP9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 MEGF8Q7Z7M0 2845 aa9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 IGLV3-9A0A075B6K5 115 aa9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 TRBV5-5A0A0J9YX44 114 aa9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 C5orf63A6NC05 138 aa9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 A6NNC1 897 aa9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 CCRL2O00421 344 aa9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 CRLF1O75462 422 aa9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 ANXA2P07355 339 aaKnown RBP9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 SLC2A1P11166 492 aa9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 KITLGP21583 273 aa9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 CCNOP22674 350 aa9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 PSMA1P25786 263 aaKnown RBP9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 GABRA5P31644 462 aa9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 TTKP33981 857 aa9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 LIPAP38571 399 aa9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 SLC6A9P48067 706 aa9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 PPP1CBP62140 327 aa9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 RPS23P62266 143 aaKnown RBP9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 FAM3AP98173 230 aa9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 ZNF92Q03936 586 aa9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 MALLQ13021 153 aa9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 TNK1Q13470 666 aa9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 GK2Q14410 553 aaPredicted RBP9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 OR8B8Q15620 311 aa9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 SSX1Q16384 188 aa9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 BCL2L15Q5TBC7 163 aa9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 ZBTB37Q5TC79 503 aa9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 RFPL4BQ6ZWI9 263 aa9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 PHYHIPQ92561 330 aa9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 AKAP1Q92667 903 aaKnown RBP eCLIP9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 UFD1Q92890 307 aa9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 PGAM5Q96HS1 289 aa9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 KCNS3Q9BQ31 491 aa9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 NDUFB11Q9NX14 153 aa9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 V9GYS6 101 aa9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 PKD1L1Q8TDX9 2849 aa9.55□□□□□ -0.88
CDK5RAP3-204ENST00000577664 hCG_38984A0A1B0GV85 526 aa9.54□□□□□ -0.88
CDK5RAP3-204ENST00000577664 VSTM5A8MXK1 200 aa9.54□□□□□ -0.88
CDK5RAP3-204ENST00000577664 ATP6V1G2-DDX39BF2Z307 99 aa9.54□□□□□ -0.88
CDK5RAP3-204ENST00000577664 MTRF1O75570 445 aaKnown RBP9.54□□□□□ -0.88
CDK5RAP3-204ENST00000577664 GPX5O75715 221 aa9.54□□□□□ -0.88
CDK5RAP3-204ENST00000577664 DHRS3O75911 302 aa9.54□□□□□ -0.88
CDK5RAP3-204ENST00000577664 ALX3O95076 343 aa9.54□□□□□ -0.88
CDK5RAP3-204ENST00000577664 IGHV3-13P01766 116 aa9.54□□□□□ -0.88
CDK5RAP3-204ENST00000577664 RAF1P04049 648 aa9.54□□□□□ -0.88
CDK5RAP3-204ENST00000577664 ACHEP22303 614 aa9.54□□□□□ -0.88
CDK5RAP3-204ENST00000577664 NEDD8Q15843 81 aa9.54□□□□□ -0.88
CDK5RAP3-204ENST00000577664 ZNF718Q3SXZ3 478 aa9.54□□□□□ -0.88
CDK5RAP3-204ENST00000577664 ZNF672Q499Z4 452 aaPredicted RBP9.54□□□□□ -0.88
CDK5RAP3-204ENST00000577664 GLYATL3Q5SZD4 288 aa9.54□□□□□ -0.88
CDK5RAP3-204ENST00000577664 PAMR1Q6UXH9 720 aa9.54□□□□□ -0.88
CDK5RAP3-204ENST00000577664 GDPGP1Q6ZNW5 385 aa9.54□□□□□ -0.88
CDK5RAP3-204ENST00000577664 DOK3Q7L591 496 aa9.54□□□□□ -0.88
CDK5RAP3-204ENST00000577664 OR1J1Q8NGS3 322 aa9.54□□□□□ -0.88
CDK5RAP3-204ENST00000577664 OR14K1Q8NGZ2 314 aa9.54□□□□□ -0.88
CDK5RAP3-204ENST00000577664 ABHD4Q8TB40 342 aa9.54□□□□□ -0.88
CDK5RAP3-204ENST00000577664 OR51E1Q8TCB6 317 aa9.54□□□□□ -0.88
CDK5RAP3-204ENST00000577664 KLF14Q8TD94 323 aaPredicted RBP9.54□□□□□ -0.88
CDK5RAP3-204ENST00000577664 THRSPQ92748 146 aa9.54□□□□□ -0.88
CDK5RAP3-204ENST00000577664 YIPF6Q96EC8 236 aa9.54□□□□□ -0.88
CDK5RAP3-204ENST00000577664 REEP6Q96HR9 211 aa9.54□□□□□ -0.88
CDK5RAP3-204ENST00000577664 PDCD1LG2Q9BQ51 273 aa9.54□□□□□ -0.88
CDK5RAP3-204ENST00000577664 OR2J1Q9GZK6 312 aa9.54□□□□□ -0.88
CDK5RAP3-204ENST00000577664 COMMD4Q9H0A8 199 aa9.54□□□□□ -0.88
CDK5RAP3-204ENST00000577664 CA10Q9NS85 328 aa9.54□□□□□ -0.88
CDK5RAP3-204ENST00000577664 HHLA2Q9UM44 414 aa9.54□□□□□ -0.88
CDK5RAP3-204ENST00000577664 RNF115Q9Y4L5 304 aa9.54□□□□□ -0.88
CDK5RAP3-204ENST00000577664 TRDV1A0A1B0GX56 115 aa9.53□□□□□ -0.88
CDK5RAP3-204ENST00000577664 IQCF6A8MYZ5 107 aa9.53□□□□□ -0.88
CDK5RAP3-204ENST00000577664 E7EQL1 145 aa9.53□□□□□ -0.88
CDK5RAP3-204ENST00000577664 GATBO75879 557 aaKnown RBP9.53□□□□□ -0.88
CDK5RAP3-204ENST00000577664 ATE1O95260 518 aa9.53□□□□□ -0.88
CDK5RAP3-204ENST00000577664 SERPINA3P01011 423 aa9.53□□□□□ -0.88
CDK5RAP3-204ENST00000577664 HSMCR30P0CW71 290 aa9.53□□□□□ -0.88
CDK5RAP3-204ENST00000577664 SELEP16581 610 aa9.53□□□□□ -0.88
CDK5RAP3-204ENST00000577664 PSMB9P28065 219 aa9.53□□□□□ -0.88
CDK5RAP3-204ENST00000577664 FGF9P31371 208 aaPredicted RBP9.53□□□□□ -0.88
CDK5RAP3-204ENST00000577664 APOBEC3AP31941 199 aaPredicted RBP9.53□□□□□ -0.88
CDK5RAP3-204ENST00000577664 TGFBR2P37173 567 aa9.53□□□□□ -0.88
CDK5RAP3-204ENST00000577664 CRYBB2P43320 205 aa9.53□□□□□ -0.88
CDK5RAP3-204ENST00000577664 MAP2K3P46734 347 aa9.53□□□□□ -0.88
CDK5RAP3-204ENST00000577664 GSK3AP49840 483 aa9.53□□□□□ -0.88
CDK5RAP3-204ENST00000577664 SPOCK1Q08629 439 aa9.53□□□□□ -0.88
CDK5RAP3-204ENST00000577664 PSG7Q13046 419 aa9.53□□□□□ -0.88
CDK5RAP3-204ENST00000577664 BLMHQ13867 455 aa9.53□□□□□ -0.88
CDK5RAP3-204ENST00000577664 EFNB3Q15768 340 aa9.53□□□□□ -0.88
CDK5RAP3-204ENST00000577664 MOGQ16653 247 aa9.53□□□□□ -0.88
CDK5RAP3-204ENST00000577664 LIPKQ5VXJ0 399 aa9.53□□□□□ -0.88
CDK5RAP3-204ENST00000577664 SHEQ5VZ18 495 aa9.53□□□□□ -0.88
CDK5RAP3-204ENST00000577664 TMEM42Q69YG0 159 aa9.53□□□□□ -0.88
CDK5RAP3-204ENST00000577664 RGS7BPQ6MZT1 257 aaPredicted RBP9.53□□□□□ -0.88
CDK5RAP3-204ENST00000577664 SLC22A25Q6T423 547 aa9.53□□□□□ -0.88
CDK5RAP3-204ENST00000577664 PGAP1Q75T13 922 aa9.53□□□□□ -0.88
CDK5RAP3-204ENST00000577664 RDH10Q8IZV5 341 aa9.53□□□□□ -0.88
CDK5RAP3-204ENST00000577664 PIAS4Q8N2W9 510 aaPredicted RBP9.53□□□□□ -0.88
CDK5RAP3-204ENST00000577664 PARP16Q8N5Y8 322 aa9.53□□□□□ -0.88
CDK5RAP3-204ENST00000577664 ZNF676Q8N7Q3 588 aa9.53□□□□□ -0.88
CDK5RAP3-204ENST00000577664 SLC25A40Q8TBP6 338 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms