RNA–Protein interactions for RNA: ENST00000542687.1

MRPL40P1-201, Transcript of mitochondrial ribosomal protein L40 pseudogene 1, humanhuman

BASIC

Gene MRPL40P1, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40P1-201ENST00000542687 CSNK2A3Q8NEV1 391 aa6.91□□□□□ -1.3
MRPL40P1-201ENST00000542687 NUP37Q8NFH4 326 aa6.91□□□□□ -1.3
MRPL40P1-201ENST00000542687 OR5D14Q8NGL3 314 aa6.91□□□□□ -1.3
MRPL40P1-201ENST00000542687 RPL3LQ92901 407 aaKnown RBP6.91□□□□□ -1.3
MRPL40P1-201ENST00000542687 TMEM106AQ96A25 262 aa6.91□□□□□ -1.3
MRPL40P1-201ENST00000542687 ISOC1Q96CN7 298 aa6.91□□□□□ -1.3
MRPL40P1-201ENST00000542687 C10orf35Q96D05 121 aa6.91□□□□□ -1.3
MRPL40P1-201ENST00000542687 HAVCR1Q96D42 359 aa6.91□□□□□ -1.3
MRPL40P1-201ENST00000542687 CMBLQ96DG6 245 aa6.91□□□□□ -1.3
MRPL40P1-201ENST00000542687 PIK3IP1Q96FE7 263 aa6.91□□□□□ -1.3
MRPL40P1-201ENST00000542687 MARS2Q96GW9 593 aaKnown RBP6.91□□□□□ -1.3
MRPL40P1-201ENST00000542687 DERL3Q96Q80 235 aa6.91□□□□□ -1.3
MRPL40P1-201ENST00000542687 SOX7Q9BT81 388 aa6.91□□□□□ -1.3
MRPL40P1-201ENST00000542687 SLITRK2Q9H156 845 aa6.91□□□□□ -1.3
MRPL40P1-201ENST00000542687 POFUT1Q9H488 388 aa6.91□□□□□ -1.3
MRPL40P1-201ENST00000542687 TCF7L1Q9HCS4 588 aa6.91□□□□□ -1.3
MRPL40P1-201ENST00000542687 ATP23Q9Y6H3 246 aa6.91□□□□□ -1.3
MRPL40P1-201ENST00000542687 V9GYS6 101 aa6.91□□□□□ -1.3
MRPL40P1-201ENST00000542687 ZGRF1Q86YA3 2104 aa6.91□□□□□ -1.3
MRPL40P1-201ENST00000542687 PTPN13Q12923 2485 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 A6NIN4 97 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 ANKRD30BLA7E2S9 258 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 CD300LBA8K4G0 201 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 PRSS44E7EML9 344 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 SLC22A1O15245 554 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 LMX1BO60663 402 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 OCMP0CE72 109 aaPredicted RBP6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 RNF224P0DH78 156 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 IGFBP2P18065 325 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 SRMP19623 302 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 THBS4P35443 961 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 SERPINB10P48595 397 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 VBP1P61758 197 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 NCS1P62166 190 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 PPP3R1P63098 170 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 NKX6-1P78426 367 aaPredicted RBP6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 SRSF1Q07955 248 aaKnown RBP eCLIP6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 PSG7Q13046 419 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 OR8B8Q15620 311 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 MOGQ16653 247 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 ZBTB37Q5TC79 503 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 MBNL2Q5VZF2 373 aaKnown RBP6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 OR2T2Q6IF00 324 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 ADAM5Q6NVV9 412 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 Q6ZSR3 168 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 USP43Q70EL4 1123 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 FTMTQ8N4E7 242 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 PARP16Q8N5Y8 322 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 KBTBD8Q8NFY9 601 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 OR56B2PQ8NGI1 322 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 SYNPRQ8TBG9 265 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 KLF14Q8TD94 323 aaPredicted RBP6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 PP6455Q8WZ26 134 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 ADAT3Q96EY9 351 aaPredicted RBP6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 TRMT61AQ96FX7 289 aaKnown RBP6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 HIST1H2AAQ96QV6 131 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 RBM38Q9H0Z9 239 aaKnown RBP6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 PPIL3Q9H2H8 161 aaKnown RBP6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 ZCCHC4Q9H5U6 513 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 RNF167Q9H6Y7 350 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 NEK6Q9HC98 313 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 SNTG1Q9NSN8 517 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 DUSP13Q9UII6 198 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 FZR1Q9UM11 496 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 FOXJ3Q9UPW0 622 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 CMAHPQ9Y471 501 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 RNF115Q9Y4L5 304 aa6.9□□□□□ -1.3
MRPL40P1-201ENST00000542687 PHF3Q92576 2039 aaKnown RBP6.89□□□□□ -1.31
MRPL40P1-201ENST00000542687 TRAV1-2A0A0B4J238 106 aa6.89□□□□□ -1.31
MRPL40P1-201ENST00000542687 ZNF816-ZNF321PA0A0X1KG74 233 aa6.89□□□□□ -1.31
MRPL40P1-201ENST00000542687 MEGF11A6BM72 1044 aa6.89□□□□□ -1.31
MRPL40P1-201ENST00000542687 ANKRD61A6NGH8 418 aa6.89□□□□□ -1.31
MRPL40P1-201ENST00000542687 DEFB108AA8MXU0 73 aa6.89□□□□□ -1.31
MRPL40P1-201ENST00000542687 H3BMQ9 156 aa6.89□□□□□ -1.31
MRPL40P1-201ENST00000542687 PDCD5O14737 125 aa6.89□□□□□ -1.31
MRPL40P1-201ENST00000542687 PIN1P1O15428 100 aa6.89□□□□□ -1.31
MRPL40P1-201ENST00000542687 MAGEB3O15480 346 aa6.89□□□□□ -1.31
MRPL40P1-201ENST00000542687 TIMM8AO60220 97 aaPredicted RBP6.89□□□□□ -1.31
MRPL40P1-201ENST00000542687 CDRT1O95170 752 aa6.89□□□□□ -1.31
MRPL40P1-201ENST00000542687 CST4P01036 141 aa6.89□□□□□ -1.31
MRPL40P1-201ENST00000542687 NRASP01111 189 aa6.89□□□□□ -1.31
MRPL40P1-201ENST00000542687 MAS1P04201 325 aa6.89□□□□□ -1.31
MRPL40P1-201ENST00000542687 ZNF250P15622 560 aa6.89□□□□□ -1.31
MRPL40P1-201ENST00000542687 FAHP16930 419 aa6.89□□□□□ -1.31
MRPL40P1-201ENST00000542687 RAB3AP20336 220 aa6.89□□□□□ -1.31
MRPL40P1-201ENST00000542687 ACKR3P25106 362 aa6.89□□□□□ -1.31
MRPL40P1-201ENST00000542687 SDC2P34741 201 aa6.89□□□□□ -1.31
MRPL40P1-201ENST00000542687 MPV17P39210 176 aa6.89□□□□□ -1.31
MRPL40P1-201ENST00000542687 MTNR1BP49286 362 aa6.89□□□□□ -1.31
MRPL40P1-201ENST00000542687 PSMD7P51665 324 aa6.89□□□□□ -1.31
MRPL40P1-201ENST00000542687 PRSS12P56730 875 aa6.89□□□□□ -1.31
MRPL40P1-201ENST00000542687 KLF3P57682 345 aaPredicted RBP6.89□□□□□ -1.31
MRPL40P1-201ENST00000542687 TNK1Q13470 666 aa6.89□□□□□ -1.31
MRPL40P1-201ENST00000542687 DAZAP2Q15038 168 aaPredicted RBP6.89□□□□□ -1.31
MRPL40P1-201ENST00000542687 CLVS2Q5SYC1 327 aa6.89□□□□□ -1.31
MRPL40P1-201ENST00000542687 FAM27D1Q5T7N8 215 aa6.89□□□□□ -1.31
MRPL40P1-201ENST00000542687 MOB3CQ70IA8 216 aa6.89□□□□□ -1.31
MRPL40P1-201ENST00000542687 TPRA1Q86W33 373 aa6.89□□□□□ -1.31
MRPL40P1-201ENST00000542687 OR5AS1Q8N127 324 aa6.89□□□□□ -1.31
MRPL40P1-201ENST00000542687 TMEM171Q8WVE6 324 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms