RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 UBQLN4Q9NRR5 601 aa12.95□□□□□ -0.34
SAMM50-203ENST00000474323 SLC17A4Q9Y2C5 497 aa12.95□□□□□ -0.34
SAMM50-203ENST00000474323 H7C1Q1 480 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 F10P00742 488 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 IGKV1D-16P01601 117 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 F13BP05160 661 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 SRFP11831 508 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 DNASE1L1P49184 302 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 SLC26A5P58743 744 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 SPOCK1Q08629 439 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 SLC9A3R2Q15599 337 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 Q7L0L9 218 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 TAF8Q7Z7C8 310 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 LYPD6Q86Y78 171 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 C19orf47Q8N9M1 422 aaKnown RBP12.94□□□□□ -0.34
SAMM50-203ENST00000474323 UBAC2Q8NBM4 344 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 OR4K15Q8NH41 348 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 TCTN2Q96GX1 697 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 CA14Q9ULX7 337 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 AMDHD2Q9Y303 409 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 CACNA1CQ13936 2221 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 USP34Q70CQ2 3546 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 COL6A3P12111 3177 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 A0A087X0M5 115 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 A0A1B0GX30 115 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 CXorf65A6NEN9 183 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 J3KRW8 73 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 ZNF264O43296 627 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 THBS4P35443 961 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 ROM1Q03395 351 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 ZNHIT3Q15649 155 aaPredicted RBP12.94□□□□□ -0.34
SAMM50-203ENST00000474323 RD3Q7Z3Z2 195 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 OR52R1Q8NGF1 315 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 OR4D6Q8NGJ1 314 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 CD300LFQ8TDQ1 290 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 MR1Q95460 341 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 CMBLQ96DG6 245 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 TM4SF19Q96DZ7 209 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 TMEM74BQ9NUR3 256 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 PPP1R14DQ9NXH3 145 aa12.94□□□□□ -0.34
SAMM50-203ENST00000474323 RPL36A-HNRNPH2H7BZ11 118 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 CSTAP01040 98 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 ASAH2BP0C7U1 165 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 RPL12P30050 165 aaKnown RBP12.93□□□□□ -0.34
SAMM50-203ENST00000474323 S100A10P60903 97 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 RSU1Q15404 277 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 SLC18B1Q6NT16 456 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.93□□□□□ -0.34
SAMM50-203ENST00000474323 CATSPERDQ86XM0 798 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 HLA-CQ95604 372 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 GALNT14Q96FL9 552 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 TSPAN32Q96QS1 320 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 NUDT16L1Q9BRJ7 211 aaKnown RBP12.93□□□□□ -0.34
SAMM50-203ENST00000474323 LMF2Q9BU23 707 aaKnown RBP12.93□□□□□ -0.34
SAMM50-203ENST00000474323 PBDC1Q9BVG4 233 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 RHBDD3Q9Y3P4 386 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 SPACA6W5XKT8 324 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 SCN2AQ99250 2005 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 A0A1B0GWJ7 208 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 BTBD17A6NE02 478 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 K7EPK0 472 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 DANCRP0C864 163 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 PNMTP11086 282 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 SUPT4H1P63272 117 aaKnown RBP12.93□□□□□ -0.34
SAMM50-203ENST00000474323 ANKRD55Q3KP44 614 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 C14orf28Q4W4Y0 310 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 VAX1Q5SQQ9 334 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 OR2A2Q6IF42 318 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 FBXO42Q6P3S6 717 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 KCTD18Q6PI47 426 aaPredicted RBP12.93□□□□□ -0.34
SAMM50-203ENST00000474323 MED25Q71SY5 747 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 SLC35D2Q76EJ3 337 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 FAM71E2Q8N5Q1 922 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 CSNK1A1LQ8N752 337 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 ZNF610Q8N9Z0 462 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 OR4N2Q8NGD1 307 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 TMEM68Q96MH6 324 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 NEU1Q99519 415 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 LPAR4Q99677 370 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 TIMM29Q9BSF4 260 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 CNTNAP3Q9BZ76 1288 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 MMP25Q9NPA2 562 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 GSKIPQ9P0R6 139 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 SH3BGRL2Q9UJC5 107 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 ATXN7L1Q9ULK2 861 aaPredicted RBP12.93□□□□□ -0.34
SAMM50-203ENST00000474323 HHLA2Q9UM44 414 aa12.93□□□□□ -0.34
SAMM50-203ENST00000474323 ELOA3CA0A087WX78 387 aaPredicted RBP12.92□□□□□ -0.34
SAMM50-203ENST00000474323 PRSS38A1L453 326 aa12.92□□□□□ -0.34
SAMM50-203ENST00000474323 ZNF354AO60765 605 aaPredicted RBP12.92□□□□□ -0.34
SAMM50-203ENST00000474323 HSD11B2P80365 405 aa12.92□□□□□ -0.34
SAMM50-203ENST00000474323 RPL18Q07020 188 aaKnown RBP12.92□□□□□ -0.34
SAMM50-203ENST00000474323 BIKQ13323 160 aa12.92□□□□□ -0.34
SAMM50-203ENST00000474323 GAMTQ14353 236 aa12.92□□□□□ -0.34
SAMM50-203ENST00000474323 CLINT1Q14677 625 aa12.92□□□□□ -0.34
SAMM50-203ENST00000474323 ZNF529Q6P280 563 aa12.92□□□□□ -0.34
SAMM50-203ENST00000474323 OR13C3Q8NGS6 347 aa12.92□□□□□ -0.34
SAMM50-203ENST00000474323 MUCL1Q96DR8 90 aa12.92□□□□□ -0.34
SAMM50-203ENST00000474323 BMFQ96LC9 184 aa12.92□□□□□ -0.34
SAMM50-203ENST00000474323 GNRHR2Q96P88 292 aa12.92□□□□□ -0.34
SAMM50-203ENST00000474323 SLC2A4RGQ9NR83 387 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms